RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-218ENST00000574653 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
TOM1L1-218ENST00000574653 CLCN6P51797 869 aa12.19□□□□□ -0.46
TOM1L1-218ENST00000574653 NUBP1P53384 320 aa12.19□□□□□ -0.46
TOM1L1-218ENST00000574653 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
TOM1L1-218ENST00000574653 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-218ENST00000574653 NPM1P06748 294 aaKnown RBP eCLIP12.16□□□□□ -0.46
TOM1L1-218ENST00000574653 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
TOM1L1-218ENST00000574653 GSE1Q14687 1217 aa12.11□□□□□ -0.47
TOM1L1-218ENST00000574653 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
TOM1L1-218ENST00000574653 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
TOM1L1-218ENST00000574653 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
TOM1L1-218ENST00000574653 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
TOM1L1-218ENST00000574653 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
TOM1L1-218ENST00000574653 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
TOM1L1-218ENST00000574653 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
TOM1L1-218ENST00000574653 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
TOM1L1-218ENST00000574653 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
TOM1L1-218ENST00000574653 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
TOM1L1-218ENST00000574653 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
TOM1L1-218ENST00000574653 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
TOM1L1-218ENST00000574653 HS6ST3Q8IZP7 471 aa11.96□□□□□ -0.49
TOM1L1-218ENST00000574653 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
TOM1L1-218ENST00000574653 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
TOM1L1-218ENST00000574653 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
TOM1L1-218ENST00000574653 GALR2O43603 387 aaPredicted RBP11.91□□□□□ -0.5
TOM1L1-218ENST00000574653 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
TOM1L1-218ENST00000574653 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
TOM1L1-218ENST00000574653 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
TOM1L1-218ENST00000574653 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
TOM1L1-218ENST00000574653 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
TOM1L1-218ENST00000574653 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
TOM1L1-218ENST00000574653 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
TOM1L1-218ENST00000574653 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
TOM1L1-218ENST00000574653 PYGBP11216 843 aa11.83□□□□□ -0.52
TOM1L1-218ENST00000574653 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
TOM1L1-218ENST00000574653 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
TOM1L1-218ENST00000574653 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
TOM1L1-218ENST00000574653 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
TOM1L1-218ENST00000574653 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
TOM1L1-218ENST00000574653 TSHZ2Q9NRE2 1034 aa11.79□□□□□ -0.52
TOM1L1-218ENST00000574653 STK25O00506 426 aa11.77□□□□□ -0.53
TOM1L1-218ENST00000574653 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
TOM1L1-218ENST00000574653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
TOM1L1-218ENST00000574653 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
TOM1L1-218ENST00000574653 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
TOM1L1-218ENST00000574653 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
TOM1L1-218ENST00000574653 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
TOM1L1-218ENST00000574653 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
TOM1L1-218ENST00000574653 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
TOM1L1-218ENST00000574653 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
TOM1L1-218ENST00000574653 BCANQ96GW7 911 aa11.67□□□□□ -0.54
TOM1L1-218ENST00000574653 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
TOM1L1-218ENST00000574653 POTEMA6NI47 508 aa11.65□□□□□ -0.54
TOM1L1-218ENST00000574653 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
TOM1L1-218ENST00000574653 PDAP1Q13442 181 aaKnown RBP11.63□□□□□ -0.55
TOM1L1-218ENST00000574653 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
TOM1L1-218ENST00000574653 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
TOM1L1-218ENST00000574653 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
TOM1L1-218ENST00000574653 C7P10643 843 aa11.61□□□□□ -0.55
TOM1L1-218ENST00000574653 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
TOM1L1-218ENST00000574653 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
TOM1L1-218ENST00000574653 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
TOM1L1-218ENST00000574653 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
TOM1L1-218ENST00000574653 RYDENQ9NUL5 291 aaKnown RBP11.58□□□□□ -0.56
TOM1L1-218ENST00000574653 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
TOM1L1-218ENST00000574653 PSEN1P49768 467 aa11.56□□□□□ -0.56
TOM1L1-218ENST00000574653 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
TOM1L1-218ENST00000574653 MAP3K13O43283 966 aa11.55□□□□□ -0.56
TOM1L1-218ENST00000574653 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
TOM1L1-218ENST00000574653 PCDH10Q9P2E7 1040 aa11.53□□□□□ -0.56
TOM1L1-218ENST00000574653 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
TOM1L1-218ENST00000574653 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
TOM1L1-218ENST00000574653 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
TOM1L1-218ENST00000574653 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
TOM1L1-218ENST00000574653 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
TOM1L1-218ENST00000574653 FBXO22Q8NEZ5 403 aa11.41□□□□□ -0.58
TOM1L1-218ENST00000574653 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
TOM1L1-218ENST00000574653 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
TOM1L1-218ENST00000574653 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.58
TOM1L1-218ENST00000574653 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
TOM1L1-218ENST00000574653 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
TOM1L1-218ENST00000574653 SOX12O15370 315 aa11.38□□□□□ -0.59
TOM1L1-218ENST00000574653 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
TOM1L1-218ENST00000574653 TIE1P35590 1138 aa11.38□□□□□ -0.59
TOM1L1-218ENST00000574653 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
TOM1L1-218ENST00000574653 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
TOM1L1-218ENST00000574653 PPP1R37O75864 691 aa11.35□□□□□ -0.59
TOM1L1-218ENST00000574653 NLRP6P59044 892 aa11.35□□□□□ -0.59
TOM1L1-218ENST00000574653 NBR1Q14596 966 aa11.34□□□□□ -0.59
TOM1L1-218ENST00000574653 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
TOM1L1-218ENST00000574653 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-218ENST00000574653 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
TOM1L1-218ENST00000574653 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
TOM1L1-218ENST00000574653 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
TOM1L1-218ENST00000574653 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
TOM1L1-218ENST00000574653 SEC24BO95487 1268 aa11.23□□□□□ -0.61
TOM1L1-218ENST00000574653 IER5LQ5T953 404 aa11.23□□□□□ -0.61
TOM1L1-218ENST00000574653 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
TOM1L1-218ENST00000574653 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms