RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
CDC27-213ENST00000571643 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
CDC27-213ENST00000571643 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
CDC27-213ENST00000571643 ATMINO43313 823 aaPredicted RBP10.83□□□□□ -0.68
CDC27-213ENST00000571643 PELP1Q8IZL8 1130 aaKnown RBP10.83□□□□□ -0.68
CDC27-213ENST00000571643 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
CDC27-213ENST00000571643 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
CDC27-213ENST00000571643 RASEFQ8IZ41 740 aa10.8□□□□□ -0.68
CDC27-213ENST00000571643 POTEB2H3BUK9 544 aa10.79□□□□□ -0.68
CDC27-213ENST00000571643 C7P10643 843 aa10.79□□□□□ -0.68
CDC27-213ENST00000571643 SLC39A7Q92504 469 aa10.79□□□□□ -0.68
CDC27-213ENST00000571643 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
CDC27-213ENST00000571643 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
CDC27-213ENST00000571643 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
CDC27-213ENST00000571643 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
CDC27-213ENST00000571643 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
CDC27-213ENST00000571643 TIE1P35590 1138 aa10.73□□□□□ -0.69
CDC27-213ENST00000571643 NUBP1P53384 320 aa10.73□□□□□ -0.69
CDC27-213ENST00000571643 MAP3K13O43283 966 aa10.71□□□□□ -0.69
CDC27-213ENST00000571643 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
CDC27-213ENST00000571643 ATN1P54259 1190 aaPredicted RBP10.7□□□□□ -0.7
CDC27-213ENST00000571643 TRPC6Q9Y210 931 aa10.67□□□□□ -0.7
CDC27-213ENST00000571643 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
CDC27-213ENST00000571643 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
CDC27-213ENST00000571643 GSE1Q14687 1217 aa10.65□□□□□ -0.7
CDC27-213ENST00000571643 MAMSTRQ6ZN01 415 aa10.65□□□□□ -0.7
CDC27-213ENST00000571643 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
CDC27-213ENST00000571643 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
CDC27-213ENST00000571643 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
CDC27-213ENST00000571643 POTEFA5A3E0 1075 aa10.61□□□□□ -0.71
CDC27-213ENST00000571643 IER5LQ5T953 404 aa10.61□□□□□ -0.71
CDC27-213ENST00000571643 PCDHB13Q9Y5F0 798 aa10.59□□□□□ -0.71
CDC27-213ENST00000571643 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
CDC27-213ENST00000571643 SCUBE2Q9NQ36 999 aa10.55□□□□□ -0.72
CDC27-213ENST00000571643 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
CDC27-213ENST00000571643 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
CDC27-213ENST00000571643 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
CDC27-213ENST00000571643 CIZ1Q9ULV3 898 aaPredicted RBP10.5□□□□□ -0.73
CDC27-213ENST00000571643 PYGBP11216 843 aa10.49□□□□□ -0.73
CDC27-213ENST00000571643 CHRM1P11229 460 aaPredicted RBP10.48□□□□□ -0.73
CDC27-213ENST00000571643 POTEMA6NI47 508 aa10.47□□□□□ -0.73
CDC27-213ENST00000571643 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
CDC27-213ENST00000571643 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
CDC27-213ENST00000571643 SEC24BO95487 1268 aa10.46□□□□□ -0.73
CDC27-213ENST00000571643 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
CDC27-213ENST00000571643 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
CDC27-213ENST00000571643 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
CDC27-213ENST00000571643 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
CDC27-213ENST00000571643 PLCG2P16885 1265 aa10.37□□□□□ -0.75
CDC27-213ENST00000571643 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
CDC27-213ENST00000571643 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
CDC27-213ENST00000571643 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
CDC27-213ENST00000571643 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
CDC27-213ENST00000571643 FAM163AQ96GL9 167 aaPredicted RBP10.3□□□□□ -0.76
CDC27-213ENST00000571643 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
CDC27-213ENST00000571643 PSEN1P49768 467 aa10.29□□□□□ -0.76
CDC27-213ENST00000571643 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
CDC27-213ENST00000571643 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
CDC27-213ENST00000571643 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
CDC27-213ENST00000571643 SLAIN1Q8ND83 568 aa10.27□□□□□ -0.77
CDC27-213ENST00000571643 RIOK3O14730 519 aaKnown RBP10.26□□□□□ -0.77
CDC27-213ENST00000571643 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
CDC27-213ENST00000571643 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
CDC27-213ENST00000571643 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
CDC27-213ENST00000571643 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
CDC27-213ENST00000571643 ST18O60284 1047 aa10.19□□□□□ -0.78
CDC27-213ENST00000571643 PKD2Q13563 968 aa10.19□□□□□ -0.78
CDC27-213ENST00000571643 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
CDC27-213ENST00000571643 RNF25Q96BH1 459 aaPredicted RBP10.18□□□□□ -0.78
CDC27-213ENST00000571643 L3MBTL3Q96JM7 780 aaPredicted RBP10.17□□□□□ -0.78
CDC27-213ENST00000571643 SNPHO15079 494 aa10.16□□□□□ -0.78
CDC27-213ENST00000571643 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
CDC27-213ENST00000571643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.14□□□□□ -0.796e-8■■■■□ 20.9
CDC27-213ENST00000571643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.13□□□□□ -0.79
CDC27-213ENST00000571643 ZFP91Q96JP5 570 aaPredicted RBP10.13□□□□□ -0.79
CDC27-213ENST00000571643 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
CDC27-213ENST00000571643 CDAN1Q8IWY9 1227 aa10.11□□□□□ -0.79
CDC27-213ENST00000571643 RGL2O15211 777 aa10.09□□□□□ -0.79
CDC27-213ENST00000571643 STK25O00506 426 aa10.06□□□□□ -0.8
CDC27-213ENST00000571643 SOX12O15370 315 aa10.06□□□□□ -0.8
CDC27-213ENST00000571643 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
CDC27-213ENST00000571643 EFCAB3Q8N7B9 438 aa10.05□□□□□ -0.8
CDC27-213ENST00000571643 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
CDC27-213ENST00000571643 G3V3G9 751 aa10.03□□□□□ -0.8
CDC27-213ENST00000571643 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
CDC27-213ENST00000571643 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
CDC27-213ENST00000571643 NLRP6P59044 892 aa9.98□□□□□ -0.81
CDC27-213ENST00000571643 AMER1Q5JTC6 1135 aaPredicted RBP9.98□□□□□ -0.81
CDC27-213ENST00000571643 HS6ST3Q8IZP7 471 aa9.96□□□□□ -0.82
CDC27-213ENST00000571643 MARVELD3Q96A59 401 aa9.96□□□□□ -0.82
CDC27-213ENST00000571643 HOXB3P14651 431 aaPredicted RBP9.94□□□□□ -0.82
CDC27-213ENST00000571643 EMP3P54852 163 aa9.93□□□□□ -0.82
CDC27-213ENST00000571643 PHF8Q9UPP1 1060 aa9.93□□□□□ -0.82
CDC27-213ENST00000571643 CHGAP10645 457 aaKnown RBP9.9□□□□□ -0.82
CDC27-213ENST00000571643 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
CDC27-213ENST00000571643 MICALL2Q8IY33 904 aa9.89□□□□□ -0.83
CDC27-213ENST00000571643 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
CDC27-213ENST00000571643 MFRPQ9BY79 579 aa9.89□□□□□ -0.83
CDC27-213ENST00000571643 MS4A4AQ96JQ5 239 aa9.88□□□□□ -0.83
CDC27-213ENST00000571643 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms