RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 RASEFQ8IZ41 740 aa17.36■□□□□ 0.37
CHD9-220ENST00000569794 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
CHD9-220ENST00000569794 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
CHD9-220ENST00000569794 KIF12Q96FN5 646 aa17.33■□□□□ 0.36
CHD9-220ENST00000569794 ATMINO43313 823 aaPredicted RBP17.29■□□□□ 0.36
CHD9-220ENST00000569794 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
CHD9-220ENST00000569794 POTEB2H3BUK9 544 aa17.25■□□□□ 0.35
CHD9-220ENST00000569794 MAP3K13O43283 966 aa17.22■□□□□ 0.35
CHD9-220ENST00000569794 NUBP1P53384 320 aa17.21■□□□□ 0.35
CHD9-220ENST00000569794 SLC39A7Q92504 469 aa17.19■□□□□ 0.34
CHD9-220ENST00000569794 METRNQ9UJH8 293 aa17.19■□□□□ 0.34
CHD9-220ENST00000569794 OTUD5Q96G74 571 aa17.18■□□□□ 0.34
CHD9-220ENST00000569794 C7P10643 843 aa17.17■□□□□ 0.34
CHD9-220ENST00000569794 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
CHD9-220ENST00000569794 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
CHD9-220ENST00000569794 BMP2KQ9NSY1 1161 aaPredicted RBP17.13■□□□□ 0.33
CHD9-220ENST00000569794 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
CHD9-220ENST00000569794 TIE1P35590 1138 aa17.09■□□□□ 0.33
CHD9-220ENST00000569794 FAM212AQ96EL1 285 aa17.07■□□□□ 0.32
CHD9-220ENST00000569794 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
CHD9-220ENST00000569794 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
CHD9-220ENST00000569794 POTEJP0CG39 1038 aa17.02■□□□□ 0.32
CHD9-220ENST00000569794 TTLL13PA6NNM8 815 aa17■□□□□ 0.31
CHD9-220ENST00000569794 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
CHD9-220ENST00000569794 POTEFA5A3E0 1075 aa16.95■□□□□ 0.3
CHD9-220ENST00000569794 VASPP50552 380 aaPredicted RBP16.93■□□□□ 0.3
CHD9-220ENST00000569794 MAMSTRQ6ZN01 415 aa16.92■□□□□ 0.3
CHD9-220ENST00000569794 DCAF8Q5TAQ9 597 aa16.91■□□□□ 0.3
CHD9-220ENST00000569794 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
CHD9-220ENST00000569794 COLQQ9Y215 455 aaPredicted RBP16.86■□□□□ 0.29
CHD9-220ENST00000569794 PYGBP11216 843 aa16.84■□□□□ 0.29
CHD9-220ENST00000569794 IER5LQ5T953 404 aa16.84■□□□□ 0.29
CHD9-220ENST00000569794 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
CHD9-220ENST00000569794 TMEM106CQ9BVX2 250 aa16.83■□□□□ 0.28
CHD9-220ENST00000569794 SEC24BO95487 1268 aa16.82■□□□□ 0.28
CHD9-220ENST00000569794 SCUBE2Q9NQ36 999 aa16.82■□□□□ 0.28
CHD9-220ENST00000569794 GSE1Q14687 1217 aa16.74■□□□□ 0.27
CHD9-220ENST00000569794 PCDHB8Q9UN66 801 aa16.73■□□□□ 0.27
CHD9-220ENST00000569794 POTEMA6NI47 508 aa16.68■□□□□ 0.26
CHD9-220ENST00000569794 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
CHD9-220ENST00000569794 PLCG2P16885 1265 aa16.64■□□□□ 0.25
CHD9-220ENST00000569794 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
CHD9-220ENST00000569794 IFNLR1Q8IU57 520 aaPredicted RBP16.63■□□□□ 0.25
CHD9-220ENST00000569794 CHRM1P11229 460 aaPredicted RBP16.62■□□□□ 0.25
CHD9-220ENST00000569794 ZNF467Q7Z7K2 595 aaPredicted RBP16.61■□□□□ 0.25
CHD9-220ENST00000569794 LCE2DQ5TA82 110 aaPredicted RBP16.6■□□□□ 0.25
CHD9-220ENST00000569794 SPOCK2Q92563 424 aa16.59■□□□□ 0.25
CHD9-220ENST00000569794 FAM163AQ96GL9 167 aaPredicted RBP16.57■□□□□ 0.24
CHD9-220ENST00000569794 OCEL1Q9H607 264 aa16.56■□□□□ 0.24
CHD9-220ENST00000569794 PLSCR2Q9NRY7 297 aa16.53■□□□□ 0.24
CHD9-220ENST00000569794 SLAIN1Q8ND83 568 aa16.48■□□□□ 0.23
CHD9-220ENST00000569794 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
CHD9-220ENST00000569794 PSEN1P49768 467 aa16.46■□□□□ 0.23
CHD9-220ENST00000569794 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
CHD9-220ENST00000569794 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
CHD9-220ENST00000569794 MKRN3Q13064 507 aaKnown RBP16.41■□□□□ 0.22
CHD9-220ENST00000569794 PDCD7Q8N8D1 485 aaKnown RBP16.41■□□□□ 0.22
CHD9-220ENST00000569794 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
CHD9-220ENST00000569794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.22e-7■■■■■ 33.6
CHD9-220ENST00000569794 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.33■□□□□ 0.2
CHD9-220ENST00000569794 ST18O60284 1047 aa16.29■□□□□ 0.2
CHD9-220ENST00000569794 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
CHD9-220ENST00000569794 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
CHD9-220ENST00000569794 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
CHD9-220ENST00000569794 CABP2Q9NPB3 220 aa16.26■□□□□ 0.19
CHD9-220ENST00000569794 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
CHD9-220ENST00000569794 SNPHO15079 494 aa16.19■□□□□ 0.18
CHD9-220ENST00000569794 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
CHD9-220ENST00000569794 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
CHD9-220ENST00000569794 TMEM121BQ9BXQ6 578 aaPredicted RBP16.14■□□□□ 0.17
CHD9-220ENST00000569794 BOLA1Q9Y3E2 137 aa16.08■□□□□ 0.16
CHD9-220ENST00000569794 EFCAB3Q8N7B9 438 aa16.07■□□□□ 0.16
CHD9-220ENST00000569794 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
CHD9-220ENST00000569794 RIOK3O14730 519 aaKnown RBP16.06■□□□□ 0.16
CHD9-220ENST00000569794 G3V3G9 751 aa16.04■□□□□ 0.16
CHD9-220ENST00000569794 MARVELD3Q96A59 401 aa16.02■□□□□ 0.16
CHD9-220ENST00000569794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
CHD9-220ENST00000569794 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
CHD9-220ENST00000569794 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
CHD9-220ENST00000569794 SOX12O15370 315 aa15.92■□□□□ 0.14
CHD9-220ENST00000569794 EMP3P54852 163 aa15.91■□□□□ 0.14
CHD9-220ENST00000569794 HOXB3P14651 431 aaPredicted RBP15.88■□□□□ 0.13
CHD9-220ENST00000569794 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
CHD9-220ENST00000569794 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
CHD9-220ENST00000569794 PHF8Q9UPP1 1060 aa15.85■□□□□ 0.13
CHD9-220ENST00000569794 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
CHD9-220ENST00000569794 POTEB3A0JP26 581 aa15.8■□□□□ 0.12
CHD9-220ENST00000569794 POTEBQ6S5H4 581 aa15.8■□□□□ 0.12
CHD9-220ENST00000569794 BCL11BQ9C0K0 894 aaPredicted RBP15.8■□□□□ 0.12
CHD9-220ENST00000569794 FAM205CA6NFA0 338 aa15.79■□□□□ 0.12
CHD9-220ENST00000569794 TMEM92Q6UXU6 159 aa15.79■□□□□ 0.12
CHD9-220ENST00000569794 HS3ST6Q96QI5 342 aa15.79■□□□□ 0.12
CHD9-220ENST00000569794 DOK7Q18PE1 504 aa15.77■□□□□ 0.12
CHD9-220ENST00000569794 SPNS2Q8IVW8 549 aa15.76■□□□□ 0.11
CHD9-220ENST00000569794 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
CHD9-220ENST00000569794 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
CHD9-220ENST00000569794 HOXB1P14653 301 aaPredicted RBP15.74■□□□□ 0.11
CHD9-220ENST00000569794 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
CHD9-220ENST00000569794 NLRP6P59044 892 aa15.73■□□□□ 0.11
CHD9-220ENST00000569794 FBXO22Q8NEZ5 403 aa15.73■□□□□ 0.11
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