RNA–Protein interactions for RNA: ENST00000568858.1

CBFB-209, Transcript of core-binding factor subunit beta, humanhuman

TSL 3

Gene CBFB, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-209ENST00000568858 PHF12Q96QT6 1004 aa17.64■□□□□ 0.41
CBFB-209ENST00000568858 IFNLR1Q8IU57 520 aaPredicted RBP17.63■□□□□ 0.41
CBFB-209ENST00000568858 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
CBFB-209ENST00000568858 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
CBFB-209ENST00000568858 DCAF8Q5TAQ9 597 aa17.54■□□□□ 0.4
CBFB-209ENST00000568858 GSE1Q14687 1217 aa17.52■□□□□ 0.4
CBFB-209ENST00000568858 GALR2O43603 387 aaPredicted RBP17.49■□□□□ 0.39
CBFB-209ENST00000568858 KIF12Q96FN5 646 aa17.48■□□□□ 0.39
CBFB-209ENST00000568858 DCBLD2Q96PD2 775 aa17.47■□□□□ 0.39
CBFB-209ENST00000568858 MS4A3Q96HJ5 214 aa17.44■□□□□ 0.38
CBFB-209ENST00000568858 SGIP1Q9BQI5 828 aa17.41■□□□□ 0.38
CBFB-209ENST00000568858 MAP3K13O43283 966 aa17.4■□□□□ 0.38
CBFB-209ENST00000568858 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
CBFB-209ENST00000568858 PCDHB13Q9Y5F0 798 aa17.36■□□□□ 0.37
CBFB-209ENST00000568858 PYGBP11216 843 aa17.33■□□□□ 0.36
CBFB-209ENST00000568858 POTEIP0CG38 1075 aa17.28■□□□□ 0.36
CBFB-209ENST00000568858 CHRM1P11229 460 aaPredicted RBP17.26■□□□□ 0.35
CBFB-209ENST00000568858 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
CBFB-209ENST00000568858 TIE1P35590 1138 aa17.23■□□□□ 0.35
CBFB-209ENST00000568858 IFNL1Q8IU54 200 aa17.23■□□□□ 0.35
CBFB-209ENST00000568858 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.35
CBFB-209ENST00000568858 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
CBFB-209ENST00000568858 ATMINO43313 823 aaPredicted RBP17.18■□□□□ 0.34
CBFB-209ENST00000568858 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
CBFB-209ENST00000568858 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
CBFB-209ENST00000568858 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
CBFB-209ENST00000568858 TTLL13PA6NNM8 815 aa17.09■□□□□ 0.33
CBFB-209ENST00000568858 ATN1P54259 1190 aaPredicted RBP17.09■□□□□ 0.33
CBFB-209ENST00000568858 SLC39A7Q92504 469 aa17.08■□□□□ 0.32
CBFB-209ENST00000568858 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
CBFB-209ENST00000568858 C7P10643 843 aa17.04■□□□□ 0.32
CBFB-209ENST00000568858 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
CBFB-209ENST00000568858 METRNQ9UJH8 293 aa17■□□□□ 0.31
CBFB-209ENST00000568858 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
CBFB-209ENST00000568858 PDAP1Q13442 181 aaKnown RBP16.99■□□□□ 0.31
CBFB-209ENST00000568858 PSEN1P49768 467 aa16.97■□□□□ 0.31
CBFB-209ENST00000568858 LHX8Q68G74 356 aa16.96■□□□□ 0.31
CBFB-209ENST00000568858 IER5LQ5T953 404 aa16.95■□□□□ 0.3
CBFB-209ENST00000568858 ECM2O94769 699 aaPredicted RBP16.93■□□□□ 0.3
CBFB-209ENST00000568858 RIOK3O14730 519 aaKnown RBP16.92■□□□□ 0.3
CBFB-209ENST00000568858 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
CBFB-209ENST00000568858 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
CBFB-209ENST00000568858 PKD2Q13563 968 aa16.88■□□□□ 0.29
CBFB-209ENST00000568858 SEC24BO95487 1268 aa16.87■□□□□ 0.29
CBFB-209ENST00000568858 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
CBFB-209ENST00000568858 RNF25Q96BH1 459 aaPredicted RBP16.84■□□□□ 0.29
CBFB-209ENST00000568858 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
CBFB-209ENST00000568858 PLCG2P16885 1265 aa16.78■□□□□ 0.28
CBFB-209ENST00000568858 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
CBFB-209ENST00000568858 COLQQ9Y215 455 aaPredicted RBP16.74■□□□□ 0.27
CBFB-209ENST00000568858 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
CBFB-209ENST00000568858 IRX5P78411 483 aaPredicted RBP16.73■□□□□ 0.27
CBFB-209ENST00000568858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.72■□□□□ 0.27
CBFB-209ENST00000568858 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
CBFB-209ENST00000568858 OCEL1Q9H607 264 aa16.72■□□□□ 0.27
CBFB-209ENST00000568858 POTEB2H3BUK9 544 aa16.71■□□□□ 0.27
CBFB-209ENST00000568858 RGL2O15211 777 aa16.71■□□□□ 0.27
CBFB-209ENST00000568858 MAMSTRQ6ZN01 415 aa16.71■□□□□ 0.27
CBFB-209ENST00000568858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
CBFB-209ENST00000568858 SCUBE2Q9NQ36 999 aa16.64■□□□□ 0.25
CBFB-209ENST00000568858 STK25O00506 426 aa16.61■□□□□ 0.25
CBFB-209ENST00000568858 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
CBFB-209ENST00000568858 EFCAB3Q8N7B9 438 aa16.59■□□□□ 0.25
CBFB-209ENST00000568858 STK24Q9Y6E0 443 aa16.59■□□□□ 0.25
CBFB-209ENST00000568858 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
CBFB-209ENST00000568858 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
CBFB-209ENST00000568858 PDCD7Q8N8D1 485 aaKnown RBP16.57■□□□□ 0.24
CBFB-209ENST00000568858 SOX12O15370 315 aa16.55■□□□□ 0.24
CBFB-209ENST00000568858 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
CBFB-209ENST00000568858 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
CBFB-209ENST00000568858 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
CBFB-209ENST00000568858 G3V3G9 751 aa16.47■□□□□ 0.23
CBFB-209ENST00000568858 NLRP6P59044 892 aa16.43■□□□□ 0.22
CBFB-209ENST00000568858 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
CBFB-209ENST00000568858 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
CBFB-209ENST00000568858 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
CBFB-209ENST00000568858 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
CBFB-209ENST00000568858 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
CBFB-209ENST00000568858 DPY19L2Q6NUT2 758 aa16.39■□□□□ 0.21
CBFB-209ENST00000568858 BOLA1Q9Y3E2 137 aa16.38■□□□□ 0.21
CBFB-209ENST00000568858 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
CBFB-209ENST00000568858 SLAIN1Q8ND83 568 aa16.35■□□□□ 0.21
CBFB-209ENST00000568858 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
CBFB-209ENST00000568858 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
CBFB-209ENST00000568858 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
CBFB-209ENST00000568858 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.2
CBFB-209ENST00000568858 TMEM121BQ9BXQ6 578 aaPredicted RBP16.26■□□□□ 0.19
CBFB-209ENST00000568858 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
CBFB-209ENST00000568858 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
CBFB-209ENST00000568858 RYDENQ9NUL5 291 aaKnown RBP16.22■□□□□ 0.19
CBFB-209ENST00000568858 SNPHO15079 494 aa16.18■□□□□ 0.18
CBFB-209ENST00000568858 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
CBFB-209ENST00000568858 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
CBFB-209ENST00000568858 PPP1R37O75864 691 aa16.03■□□□□ 0.16
CBFB-209ENST00000568858 TMEM92Q6UXU6 159 aa15.99■□□□□ 0.15
CBFB-209ENST00000568858 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
CBFB-209ENST00000568858 GTPBP6O43824 516 aaPredicted RBP15.95■□□□□ 0.14
CBFB-209ENST00000568858 ST18O60284 1047 aa15.95■□□□□ 0.14
CBFB-209ENST00000568858 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
CBFB-209ENST00000568858 LCE2DQ5TA82 110 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms