RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.37
SHCBP1-206ENST00000567698 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
SHCBP1-206ENST00000567698 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
SHCBP1-206ENST00000567698 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
SHCBP1-206ENST00000567698 PYGBP11216 843 aa12.7□□□□□ -0.38
SHCBP1-206ENST00000567698 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
SHCBP1-206ENST00000567698 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
SHCBP1-206ENST00000567698 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
SHCBP1-206ENST00000567698 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
SHCBP1-206ENST00000567698 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
SHCBP1-206ENST00000567698 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
SHCBP1-206ENST00000567698 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
SHCBP1-206ENST00000567698 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
SHCBP1-206ENST00000567698 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
SHCBP1-206ENST00000567698 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
SHCBP1-206ENST00000567698 VGFO15240 615 aaPredicted RBP12.55□□□□□ -0.4
SHCBP1-206ENST00000567698 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
SHCBP1-206ENST00000567698 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
SHCBP1-206ENST00000567698 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-206ENST00000567698 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
SHCBP1-206ENST00000567698 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
SHCBP1-206ENST00000567698 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
SHCBP1-206ENST00000567698 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.52□□□□□ -0.41
SHCBP1-206ENST00000567698 MAP3K13O43283 966 aa12.52□□□□□ -0.41
SHCBP1-206ENST00000567698 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
SHCBP1-206ENST00000567698 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-206ENST00000567698 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
SHCBP1-206ENST00000567698 IFNL1Q8IU54 200 aa12.49□□□□□ -0.41
SHCBP1-206ENST00000567698 EVX2Q03828 476 aa12.48□□□□□ -0.41
SHCBP1-206ENST00000567698 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
SHCBP1-206ENST00000567698 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
SHCBP1-206ENST00000567698 STK25O00506 426 aa12.45□□□□□ -0.42
SHCBP1-206ENST00000567698 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
SHCBP1-206ENST00000567698 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
SHCBP1-206ENST00000567698 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-206ENST00000567698 PSEN1P49768 467 aa12.39□□□□□ -0.43
SHCBP1-206ENST00000567698 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
SHCBP1-206ENST00000567698 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
SHCBP1-206ENST00000567698 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
SHCBP1-206ENST00000567698 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
SHCBP1-206ENST00000567698 HAX1O00165 279 aa12.38□□□□□ -0.43
SHCBP1-206ENST00000567698 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
SHCBP1-206ENST00000567698 POTEHQ6S545 545 aa12.35□□□□□ -0.43
SHCBP1-206ENST00000567698 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
SHCBP1-206ENST00000567698 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
SHCBP1-206ENST00000567698 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
SHCBP1-206ENST00000567698 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
SHCBP1-206ENST00000567698 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
SHCBP1-206ENST00000567698 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
SHCBP1-206ENST00000567698 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
SHCBP1-206ENST00000567698 TIE1P35590 1138 aa12.22□□□□□ -0.45
SHCBP1-206ENST00000567698 EFCAB3Q8N7B9 438 aa12.22□□□□□ -0.45
SHCBP1-206ENST00000567698 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
SHCBP1-206ENST00000567698 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
SHCBP1-206ENST00000567698 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
SHCBP1-206ENST00000567698 CLCN6P51797 869 aa12.2□□□□□ -0.46
SHCBP1-206ENST00000567698 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
SHCBP1-206ENST00000567698 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
SHCBP1-206ENST00000567698 GABBR2O75899 941 aa12.16□□□□□ -0.46
SHCBP1-206ENST00000567698 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
SHCBP1-206ENST00000567698 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SHCBP1-206ENST00000567698 SOX12O15370 315 aa12.14□□□□□ -0.47
SHCBP1-206ENST00000567698 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
SHCBP1-206ENST00000567698 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
SHCBP1-206ENST00000567698 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
SHCBP1-206ENST00000567698 PPP1R37O75864 691 aa12.11□□□□□ -0.47
SHCBP1-206ENST00000567698 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-206ENST00000567698 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-206ENST00000567698 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-206ENST00000567698 NLRP6P59044 892 aa12.09□□□□□ -0.47
SHCBP1-206ENST00000567698 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
SHCBP1-206ENST00000567698 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
SHCBP1-206ENST00000567698 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
SHCBP1-206ENST00000567698 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
SHCBP1-206ENST00000567698 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
SHCBP1-206ENST00000567698 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
SHCBP1-206ENST00000567698 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
SHCBP1-206ENST00000567698 PDCD7Q8N8D1 485 aaKnown RBP12□□□□□ -0.49
SHCBP1-206ENST00000567698 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
SHCBP1-206ENST00000567698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
SHCBP1-206ENST00000567698 IER5LQ5T953 404 aa11.95□□□□□ -0.5
SHCBP1-206ENST00000567698 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
SHCBP1-206ENST00000567698 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
SHCBP1-206ENST00000567698 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
SHCBP1-206ENST00000567698 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
SHCBP1-206ENST00000567698 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
SHCBP1-206ENST00000567698 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
SHCBP1-206ENST00000567698 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
SHCBP1-206ENST00000567698 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
SHCBP1-206ENST00000567698 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
SHCBP1-206ENST00000567698 SLC39A7Q92504 469 aa11.82□□□□□ -0.52
SHCBP1-206ENST00000567698 C7P10643 843 aa11.8□□□□□ -0.52
SHCBP1-206ENST00000567698 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
SHCBP1-206ENST00000567698 PLCG2P16885 1265 aa11.79□□□□□ -0.52
SHCBP1-206ENST00000567698 MFSD10Q14728 455 aa11.79□□□□□ -0.52
SHCBP1-206ENST00000567698 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
SHCBP1-206ENST00000567698 KCNV2Q8TDN2 545 aa11.74□□□□□ -0.53
SHCBP1-206ENST00000567698 BCANQ96GW7 911 aa11.74□□□□□ -0.53
SHCBP1-206ENST00000567698 PDE4AP27815 886 aa11.73□□□□□ -0.53
SHCBP1-206ENST00000567698 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms