RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 POTEMA6NI47 508 aa9.24□□□□□ -0.93
SMG1-212ENST00000566328 ASTLQ6HA08 431 aaPredicted RBP9.23□□□□□ -0.93
SMG1-212ENST00000566328 PLCD3Q8N3E9 789 aa9.23□□□□□ -0.93
SMG1-212ENST00000566328 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
SMG1-212ENST00000566328 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
SMG1-212ENST00000566328 METRNQ9UJH8 293 aa9.22□□□□□ -0.93
SMG1-212ENST00000566328 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
SMG1-212ENST00000566328 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
SMG1-212ENST00000566328 CCDC61Q9Y6R9 512 aa9.2□□□□□ -0.94
SMG1-212ENST00000566328 FKBP8Q14318 412 aa9.19□□□□□ -0.94
SMG1-212ENST00000566328 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
SMG1-212ENST00000566328 C7P10643 843 aa9.18□□□□□ -0.94
SMG1-212ENST00000566328 SLC39A7Q92504 469 aa9.18□□□□□ -0.94
SMG1-212ENST00000566328 KIF12Q96FN5 646 aa9.15□□□□□ -0.94
SMG1-212ENST00000566328 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
SMG1-212ENST00000566328 RASEFQ8IZ41 740 aa9.13□□□□□ -0.95
SMG1-212ENST00000566328 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
SMG1-212ENST00000566328 ATN1P54259 1190 aaPredicted RBP9.1□□□□□ -0.95
SMG1-212ENST00000566328 FBXO3Q9UK99 471 aa9.1□□□□□ -0.95
SMG1-212ENST00000566328 MAP3K13O43283 966 aa9.09□□□□□ -0.95
SMG1-212ENST00000566328 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
SMG1-212ENST00000566328 TIE1P35590 1138 aa9.07□□□□□ -0.96
SMG1-212ENST00000566328 FAM212AQ96EL1 285 aa9.07□□□□□ -0.96
SMG1-212ENST00000566328 SGIP1Q9BQI5 828 aa9.07□□□□□ -0.96
SMG1-212ENST00000566328 SCUBE2Q9NQ36 999 aa9.06□□□□□ -0.96
SMG1-212ENST00000566328 NUBP1P53384 320 aa9.05□□□□□ -0.96
SMG1-212ENST00000566328 BMP2KQ9NSY1 1161 aaPredicted RBP9.05□□□□□ -0.96
SMG1-212ENST00000566328 POTEFA5A3E0 1075 aa9.03□□□□□ -0.96
SMG1-212ENST00000566328 PCDHB13Q9Y5F0 798 aa9.03□□□□□ -0.96
SMG1-212ENST00000566328 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
SMG1-212ENST00000566328 TRPC6Q9Y210 931 aa9.02□□□□□ -0.97
SMG1-212ENST00000566328 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
SMG1-212ENST00000566328 SEC24BO95487 1268 aa8.97□□□□□ -0.97
SMG1-212ENST00000566328 IER5LQ5T953 404 aa8.96□□□□□ -0.98
SMG1-212ENST00000566328 DCAF8Q5TAQ9 597 aa8.96□□□□□ -0.98
SMG1-212ENST00000566328 COLQQ9Y215 455 aaPredicted RBP8.95□□□□□ -0.98
SMG1-212ENST00000566328 IFNL1Q8IU54 200 aa8.94□□□□□ -0.98
SMG1-212ENST00000566328 TRIM35Q9UPQ4 493 aa8.94□□□□□ -0.98
SMG1-212ENST00000566328 KLHL34Q8N239 644 aa8.93□□□□□ -0.98
SMG1-212ENST00000566328 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
SMG1-212ENST00000566328 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
SMG1-212ENST00000566328 GSE1Q14687 1217 aa8.89□□□□□ -0.99
SMG1-212ENST00000566328 PYGBP11216 843 aa8.88□□□□□ -0.99
SMG1-212ENST00000566328 PLCG2P16885 1265 aa8.85□□□□□ -0.99
SMG1-212ENST00000566328 CDAN1Q8IWY9 1227 aa8.85□□□□□ -0.99
SMG1-212ENST00000566328 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
SMG1-212ENST00000566328 PCDHB8Q9UN66 801 aa8.81□□□□□ -1
SMG1-212ENST00000566328 CHRM1P11229 460 aaPredicted RBP8.8□□□□□ -1
SMG1-212ENST00000566328 SLAIN1Q8ND83 568 aa8.8□□□□□ -1
SMG1-212ENST00000566328 ST18O60284 1047 aa8.79□□□□□ -1
SMG1-212ENST00000566328 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
SMG1-212ENST00000566328 OCEL1Q9H607 264 aa8.79□□□□□ -1
SMG1-212ENST00000566328 GOLGA2Q08379 1002 aa8.77□□□□□ -1.01
SMG1-212ENST00000566328 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
SMG1-212ENST00000566328 MKRN3Q13064 507 aaKnown RBP8.73□□□□□ -1.01
SMG1-212ENST00000566328 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
SMG1-212ENST00000566328 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.02
SMG1-212ENST00000566328 PSEN1P49768 467 aa8.7□□□□□ -1.02
SMG1-212ENST00000566328 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.7□□□□□ -1.02
SMG1-212ENST00000566328 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
SMG1-212ENST00000566328 L3MBTL3Q96JM7 780 aaPredicted RBP8.68□□□□□ -1.02
SMG1-212ENST00000566328 TMEM121BQ9BXQ6 578 aaPredicted RBP8.68□□□□□ -1.02
SMG1-212ENST00000566328 SNPHO15079 494 aa8.67□□□□□ -1.02
SMG1-212ENST00000566328 MMRN1Q13201 1228 aa8.65□□□□□ -1.02
SMG1-212ENST00000566328 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.02
SMG1-212ENST00000566328 SPNS2Q8IVW8 549 aa8.65□□□□□ -1.02
SMG1-212ENST00000566328 TRIM41Q8WV44 630 aa8.65□□□□□ -1.02
SMG1-212ENST00000566328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.021e-10■■■■■ 50.8
SMG1-212ENST00000566328 PDCD7Q8N8D1 485 aaKnown RBP8.64□□□□□ -1.03
SMG1-212ENST00000566328 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
SMG1-212ENST00000566328 G3V3G9 751 aa8.59□□□□□ -1.03
SMG1-212ENST00000566328 CABP2Q9NPB3 220 aa8.59□□□□□ -1.03
SMG1-212ENST00000566328 ILDR1Q86SU0 546 aaPredicted RBP8.57□□□□□ -1.04
SMG1-212ENST00000566328 EMP3P54852 163 aa8.53□□□□□ -1.04
SMG1-212ENST00000566328 BOLA1Q9Y3E2 137 aa8.52□□□□□ -1.05
SMG1-212ENST00000566328 RIOK3O14730 519 aaKnown RBP8.49□□□□□ -1.05
SMG1-212ENST00000566328 DPY19L2Q6NUT2 758 aa8.49□□□□□ -1.05
SMG1-212ENST00000566328 POTEB3A0JP26 581 aa8.48□□□□□ -1.05
SMG1-212ENST00000566328 POTEBQ6S5H4 581 aa8.48□□□□□ -1.05
SMG1-212ENST00000566328 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
SMG1-212ENST00000566328 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
SMG1-212ENST00000566328 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
SMG1-212ENST00000566328 EFCAB3Q8N7B9 438 aa8.46□□□□□ -1.06
SMG1-212ENST00000566328 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
SMG1-212ENST00000566328 FAM205CA6NFA0 338 aa8.45□□□□□ -1.06
SMG1-212ENST00000566328 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
SMG1-212ENST00000566328 SOX12O15370 315 aa8.45□□□□□ -1.06
SMG1-212ENST00000566328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
SMG1-212ENST00000566328 DOK7Q18PE1 504 aa8.41□□□□□ -1.06
SMG1-212ENST00000566328 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
SMG1-212ENST00000566328 ZFP91Q96JP5 570 aaPredicted RBP8.41□□□□□ -1.06
SMG1-212ENST00000566328 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
SMG1-212ENST00000566328 RNF25Q96BH1 459 aaPredicted RBP8.4□□□□□ -1.06
SMG1-212ENST00000566328 HOXB3P14651 431 aaPredicted RBP8.38□□□□□ -1.07
SMG1-212ENST00000566328 MICALL2Q8IY33 904 aa8.37□□□□□ -1.07
SMG1-212ENST00000566328 HOXB1P14653 301 aaPredicted RBP8.35□□□□□ -1.07
SMG1-212ENST00000566328 NLRP6P59044 892 aa8.34□□□□□ -1.07
SMG1-212ENST00000566328 PHF8Q9UPP1 1060 aa8.34□□□□□ -1.07
SMG1-212ENST00000566328 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
SMG1-212ENST00000566328 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms