RNA–Protein interactions for RNA: ENST00000566024.1

CYLD-209, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-209ENST00000566024 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
CYLD-209ENST00000566024 SLC39A7Q92504 469 aa12.3□□□□□ -0.44
CYLD-209ENST00000566024 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
CYLD-209ENST00000566024 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
CYLD-209ENST00000566024 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
CYLD-209ENST00000566024 C7P10643 843 aa12.28□□□□□ -0.44
CYLD-209ENST00000566024 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
CYLD-209ENST00000566024 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
CYLD-209ENST00000566024 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
CYLD-209ENST00000566024 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
CYLD-209ENST00000566024 FKBP8Q14318 412 aa12.2□□□□□ -0.46
CYLD-209ENST00000566024 MAP3K13O43283 966 aa12.19□□□□□ -0.46
CYLD-209ENST00000566024 TIE1P35590 1138 aa12.19□□□□□ -0.46
CYLD-209ENST00000566024 ATN1P54259 1190 aaPredicted RBP12.19□□□□□ -0.46
CYLD-209ENST00000566024 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
CYLD-209ENST00000566024 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
CYLD-209ENST00000566024 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
CYLD-209ENST00000566024 NUBP1P53384 320 aa12.14□□□□□ -0.47
CYLD-209ENST00000566024 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
CYLD-209ENST00000566024 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
CYLD-209ENST00000566024 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
CYLD-209ENST00000566024 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.48
CYLD-209ENST00000566024 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
CYLD-209ENST00000566024 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
CYLD-209ENST00000566024 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
CYLD-209ENST00000566024 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
CYLD-209ENST00000566024 IER5LQ5T953 404 aa12.03□□□□□ -0.48
CYLD-209ENST00000566024 POTEMA6NI47 508 aa12.01□□□□□ -0.49
CYLD-209ENST00000566024 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
CYLD-209ENST00000566024 SEC24BO95487 1268 aa11.99□□□□□ -0.49
CYLD-209ENST00000566024 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
CYLD-209ENST00000566024 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
CYLD-209ENST00000566024 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
CYLD-209ENST00000566024 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
CYLD-209ENST00000566024 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
CYLD-209ENST00000566024 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
CYLD-209ENST00000566024 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
CYLD-209ENST00000566024 PYGBP11216 843 aa11.87□□□□□ -0.51
CYLD-209ENST00000566024 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
CYLD-209ENST00000566024 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
CYLD-209ENST00000566024 PLCG2P16885 1265 aa11.85□□□□□ -0.51
CYLD-209ENST00000566024 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
CYLD-209ENST00000566024 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
CYLD-209ENST00000566024 GSE1Q14687 1217 aa11.83□□□□□ -0.52
CYLD-209ENST00000566024 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
CYLD-209ENST00000566024 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
CYLD-209ENST00000566024 OCEL1Q9H607 264 aa11.78□□□□□ -0.52
CYLD-209ENST00000566024 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
CYLD-209ENST00000566024 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
CYLD-209ENST00000566024 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
CYLD-209ENST00000566024 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
CYLD-209ENST00000566024 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
CYLD-209ENST00000566024 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
CYLD-209ENST00000566024 PSEN1P49768 467 aa11.64□□□□□ -0.55
CYLD-209ENST00000566024 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
CYLD-209ENST00000566024 ST18O60284 1047 aa11.63□□□□□ -0.55
CYLD-209ENST00000566024 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
CYLD-209ENST00000566024 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
CYLD-209ENST00000566024 SNPHO15079 494 aa11.61□□□□□ -0.55
CYLD-209ENST00000566024 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
CYLD-209ENST00000566024 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
CYLD-209ENST00000566024 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
CYLD-209ENST00000566024 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
CYLD-209ENST00000566024 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
CYLD-209ENST00000566024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
CYLD-209ENST00000566024 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
CYLD-209ENST00000566024 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
CYLD-209ENST00000566024 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
CYLD-209ENST00000566024 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
CYLD-209ENST00000566024 G3V3G9 751 aa11.42□□□□□ -0.58
CYLD-209ENST00000566024 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
CYLD-209ENST00000566024 MARVELD3Q96A59 401 aa11.4□□□□□ -0.58
CYLD-209ENST00000566024 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
CYLD-209ENST00000566024 EMP3P54852 163 aa11.36□□□□□ -0.59
CYLD-209ENST00000566024 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
CYLD-209ENST00000566024 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
CYLD-209ENST00000566024 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
CYLD-209ENST00000566024 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
CYLD-209ENST00000566024 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
CYLD-209ENST00000566024 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
CYLD-209ENST00000566024 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
CYLD-209ENST00000566024 SOX12O15370 315 aa11.26□□□□□ -0.61
CYLD-209ENST00000566024 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
CYLD-209ENST00000566024 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
CYLD-209ENST00000566024 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
CYLD-209ENST00000566024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
CYLD-209ENST00000566024 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
CYLD-209ENST00000566024 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
CYLD-209ENST00000566024 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
CYLD-209ENST00000566024 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
CYLD-209ENST00000566024 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
CYLD-209ENST00000566024 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
CYLD-209ENST00000566024 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
CYLD-209ENST00000566024 KRTAP3-3Q9BYR6 98 aa11.21□□□□□ -0.61
CYLD-209ENST00000566024 KRTAP3-2Q9BYR7 98 aa11.21□□□□□ -0.61
CYLD-209ENST00000566024 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
CYLD-209ENST00000566024 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
CYLD-209ENST00000566024 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
CYLD-209ENST00000566024 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
CYLD-209ENST00000566024 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms