RNA–Protein interactions for RNA: ENST00000563246.1

SCAPER-206, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-206ENST00000563246 FKBP8Q14318 412 aa14.32□□□□□ -0.12
SCAPER-206ENST00000563246 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
SCAPER-206ENST00000563246 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
SCAPER-206ENST00000563246 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
SCAPER-206ENST00000563246 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
SCAPER-206ENST00000563246 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
SCAPER-206ENST00000563246 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
SCAPER-206ENST00000563246 SLC39A7Q92504 469 aa14.23□□□□□ -0.13
SCAPER-206ENST00000563246 C7P10643 843 aa14.21□□□□□ -0.13
SCAPER-206ENST00000563246 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
SCAPER-206ENST00000563246 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
SCAPER-206ENST00000563246 MAP3K13O43283 966 aa14.16□□□□□ -0.14
SCAPER-206ENST00000563246 OTUD5Q96G74 571 aa14.16□□□□□ -0.14
SCAPER-206ENST00000563246 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
SCAPER-206ENST00000563246 TIE1P35590 1138 aa14.15□□□□□ -0.14
SCAPER-206ENST00000563246 NUBP1P53384 320 aa14.15□□□□□ -0.14
SCAPER-206ENST00000563246 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
SCAPER-206ENST00000563246 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
SCAPER-206ENST00000563246 BMP2KQ9NSY1 1161 aaPredicted RBP14.11□□□□□ -0.15
SCAPER-206ENST00000563246 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
SCAPER-206ENST00000563246 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
SCAPER-206ENST00000563246 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
SCAPER-206ENST00000563246 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
SCAPER-206ENST00000563246 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
SCAPER-206ENST00000563246 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
SCAPER-206ENST00000563246 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
SCAPER-206ENST00000563246 IER5LQ5T953 404 aa13.96□□□□□ -0.17
SCAPER-206ENST00000563246 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
SCAPER-206ENST00000563246 IFNL1Q8IU54 200 aa13.94□□□□□ -0.18
SCAPER-206ENST00000563246 SCUBE2Q9NQ36 999 aa13.94□□□□□ -0.18
SCAPER-206ENST00000563246 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
SCAPER-206ENST00000563246 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
SCAPER-206ENST00000563246 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
SCAPER-206ENST00000563246 SEC24BO95487 1268 aa13.89□□□□□ -0.19
SCAPER-206ENST00000563246 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
SCAPER-206ENST00000563246 COLQQ9Y215 455 aaPredicted RBP13.85□□□□□ -0.19
SCAPER-206ENST00000563246 GSE1Q14687 1217 aa13.83□□□□□ -0.2
SCAPER-206ENST00000563246 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
SCAPER-206ENST00000563246 PYGBP11216 843 aa13.82□□□□□ -0.2
SCAPER-206ENST00000563246 POTEMA6NI47 508 aa13.79□□□□□ -0.2
SCAPER-206ENST00000563246 POTEGQ6S5H5 508 aa13.75□□□□□ -0.21
SCAPER-206ENST00000563246 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
SCAPER-206ENST00000563246 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
SCAPER-206ENST00000563246 PLCG2P16885 1265 aa13.73□□□□□ -0.21
SCAPER-206ENST00000563246 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
SCAPER-206ENST00000563246 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
SCAPER-206ENST00000563246 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
SCAPER-206ENST00000563246 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
SCAPER-206ENST00000563246 LCE2DQ5TA82 110 aaPredicted RBP13.66□□□□□ -0.22
SCAPER-206ENST00000563246 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
SCAPER-206ENST00000563246 FAM163AQ96GL9 167 aaPredicted RBP13.65□□□□□ -0.22
SCAPER-206ENST00000563246 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
SCAPER-206ENST00000563246 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
SCAPER-206ENST00000563246 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
SCAPER-206ENST00000563246 ABCC9O60706 1549 aa13.57□□□□□ -0.24
SCAPER-206ENST00000563246 PSEN1P49768 467 aa13.55□□□□□ -0.24
SCAPER-206ENST00000563246 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
SCAPER-206ENST00000563246 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
SCAPER-206ENST00000563246 PDCD7Q8N8D1 485 aaKnown RBP13.52□□□□□ -0.25
SCAPER-206ENST00000563246 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
SCAPER-206ENST00000563246 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
SCAPER-206ENST00000563246 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
SCAPER-206ENST00000563246 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
SCAPER-206ENST00000563246 SNPHO15079 494 aa13.45□□□□□ -0.26
SCAPER-206ENST00000563246 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
SCAPER-206ENST00000563246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCAPER-206ENST00000563246 ST18O60284 1047 aa13.43□□□□□ -0.26
SCAPER-206ENST00000563246 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
SCAPER-206ENST00000563246 TMEM121BQ9BXQ6 578 aaPredicted RBP13.4□□□□□ -0.26
SCAPER-206ENST00000563246 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
SCAPER-206ENST00000563246 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
SCAPER-206ENST00000563246 CCDC180Q9P1Z9 1646 aa13.29□□□□□ -0.28
SCAPER-206ENST00000563246 G3V3G9 751 aa13.27□□□□□ -0.29
SCAPER-206ENST00000563246 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
SCAPER-206ENST00000563246 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
SCAPER-206ENST00000563246 RIOK3O14730 519 aaKnown RBP13.22□□□□□ -0.29
SCAPER-206ENST00000563246 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
SCAPER-206ENST00000563246 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
SCAPER-206ENST00000563246 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
SCAPER-206ENST00000563246 SOX12O15370 315 aa13.16□□□□□ -0.3
SCAPER-206ENST00000563246 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
SCAPER-206ENST00000563246 EMP3P54852 163 aa13.13□□□□□ -0.31
SCAPER-206ENST00000563246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
SCAPER-206ENST00000563246 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
SCAPER-206ENST00000563246 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
SCAPER-206ENST00000563246 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
SCAPER-206ENST00000563246 DOK7Q18PE1 504 aa13.06□□□□□ -0.32
SCAPER-206ENST00000563246 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
SCAPER-206ENST00000563246 HS3ST6Q96QI5 342 aa13.04□□□□□ -0.32
SCAPER-206ENST00000563246 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
SCAPER-206ENST00000563246 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
SCAPER-206ENST00000563246 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
SCAPER-206ENST00000563246 MS4A4AQ96JQ5 239 aa13.02□□□□□ -0.33
SCAPER-206ENST00000563246 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
SCAPER-206ENST00000563246 FAM205CA6NFA0 338 aa13□□□□□ -0.33
SCAPER-206ENST00000563246 RIMBP2O15034 1052 aa13□□□□□ -0.33
SCAPER-206ENST00000563246 NLRP6P59044 892 aa12.98□□□□□ -0.33
SCAPER-206ENST00000563246 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
SCAPER-206ENST00000563246 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
SCAPER-206ENST00000563246 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms