RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
LINC00557-201ENST00000563184 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
LINC00557-201ENST00000563184 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
LINC00557-201ENST00000563184 CLCN6P51797 869 aa14.44□□□□□ -0.1
LINC00557-201ENST00000563184 GSE1Q14687 1217 aa14.43□□□□□ -0.1
LINC00557-201ENST00000563184 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
LINC00557-201ENST00000563184 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
LINC00557-201ENST00000563184 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
LINC00557-201ENST00000563184 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
LINC00557-201ENST00000563184 ZRANB1Q9UGI0 708 aa14.39□□□□□ -0.11
LINC00557-201ENST00000563184 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
LINC00557-201ENST00000563184 GABBR2O75899 941 aa14.35□□□□□ -0.11
LINC00557-201ENST00000563184 RNF25Q96BH1 459 aaPredicted RBP14.33□□□□□ -0.12
LINC00557-201ENST00000563184 PLCB2Q00722 1185 aa14.25□□□□□ -0.13
LINC00557-201ENST00000563184 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
LINC00557-201ENST00000563184 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
LINC00557-201ENST00000563184 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
LINC00557-201ENST00000563184 PYGBP11216 843 aa14.19□□□□□ -0.14
LINC00557-201ENST00000563184 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
LINC00557-201ENST00000563184 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
LINC00557-201ENST00000563184 RIOK3O14730 519 aaKnown RBP14.18□□□□□ -0.14
LINC00557-201ENST00000563184 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
LINC00557-201ENST00000563184 HS6ST3Q8IZP7 471 aa14.13□□□□□ -0.15
LINC00557-201ENST00000563184 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
LINC00557-201ENST00000563184 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
LINC00557-201ENST00000563184 KIF12Q96FN5 646 aa14.08□□□□□ -0.16
LINC00557-201ENST00000563184 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
LINC00557-201ENST00000563184 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
LINC00557-201ENST00000563184 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
LINC00557-201ENST00000563184 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
LINC00557-201ENST00000563184 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
LINC00557-201ENST00000563184 SGIP1Q9BQI5 828 aa14.04□□□□□ -0.16
LINC00557-201ENST00000563184 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
LINC00557-201ENST00000563184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.02□□□□□ -0.17
LINC00557-201ENST00000563184 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
LINC00557-201ENST00000563184 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
LINC00557-201ENST00000563184 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
LINC00557-201ENST00000563184 STK25O00506 426 aa14□□□□□ -0.17
LINC00557-201ENST00000563184 MAP3K13O43283 966 aa13.99□□□□□ -0.17
LINC00557-201ENST00000563184 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
LINC00557-201ENST00000563184 NKX1-1Q15270 411 aaPredicted RBP13.98□□□□□ -0.17
LINC00557-201ENST00000563184 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
LINC00557-201ENST00000563184 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
LINC00557-201ENST00000563184 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
LINC00557-201ENST00000563184 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
LINC00557-201ENST00000563184 BCL11BQ9C0K0 894 aaPredicted RBP13.95□□□□□ -0.18
LINC00557-201ENST00000563184 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
LINC00557-201ENST00000563184 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
LINC00557-201ENST00000563184 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
LINC00557-201ENST00000563184 TIE1P35590 1138 aa13.89□□□□□ -0.19
LINC00557-201ENST00000563184 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
LINC00557-201ENST00000563184 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
LINC00557-201ENST00000563184 PSEN1P49768 467 aa13.86□□□□□ -0.19
LINC00557-201ENST00000563184 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
LINC00557-201ENST00000563184 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
LINC00557-201ENST00000563184 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
LINC00557-201ENST00000563184 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
LINC00557-201ENST00000563184 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
LINC00557-201ENST00000563184 SLC39A7Q92504 469 aa13.78□□□□□ -0.2
LINC00557-201ENST00000563184 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
LINC00557-201ENST00000563184 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
LINC00557-201ENST00000563184 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
LINC00557-201ENST00000563184 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
LINC00557-201ENST00000563184 C7P10643 843 aa13.75□□□□□ -0.21
LINC00557-201ENST00000563184 LHX8Q68G74 356 aa13.74□□□□□ -0.21
LINC00557-201ENST00000563184 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
LINC00557-201ENST00000563184 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
LINC00557-201ENST00000563184 MFRPQ9BY79 579 aa13.68□□□□□ -0.22
LINC00557-201ENST00000563184 IER5LQ5T953 404 aa13.67□□□□□ -0.22
LINC00557-201ENST00000563184 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
LINC00557-201ENST00000563184 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
LINC00557-201ENST00000563184 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
LINC00557-201ENST00000563184 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
LINC00557-201ENST00000563184 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
LINC00557-201ENST00000563184 SOX12O15370 315 aa13.58□□□□□ -0.24
LINC00557-201ENST00000563184 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
LINC00557-201ENST00000563184 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
LINC00557-201ENST00000563184 PPP1R37O75864 691 aa13.54□□□□□ -0.24
LINC00557-201ENST00000563184 SEC24BO95487 1268 aa13.54□□□□□ -0.24
LINC00557-201ENST00000563184 NLRP6P59044 892 aa13.54□□□□□ -0.24
LINC00557-201ENST00000563184 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
LINC00557-201ENST00000563184 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
LINC00557-201ENST00000563184 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
LINC00557-201ENST00000563184 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
LINC00557-201ENST00000563184 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
LINC00557-201ENST00000563184 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
LINC00557-201ENST00000563184 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
LINC00557-201ENST00000563184 PLCG2P16885 1265 aa13.48□□□□□ -0.25
LINC00557-201ENST00000563184 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
LINC00557-201ENST00000563184 OCEL1Q9H607 264 aa13.46□□□□□ -0.25
LINC00557-201ENST00000563184 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
LINC00557-201ENST00000563184 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
LINC00557-201ENST00000563184 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
LINC00557-201ENST00000563184 BCANQ96GW7 911 aa13.42□□□□□ -0.26
LINC00557-201ENST00000563184 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
LINC00557-201ENST00000563184 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
LINC00557-201ENST00000563184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00557-201ENST00000563184 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
LINC00557-201ENST00000563184 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
LINC00557-201ENST00000563184 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms