RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NUBP1P53384 320 aa14.01□□□□□ -0.17
SMG1-206ENST00000562668 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
SMG1-206ENST00000562668 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
SMG1-206ENST00000562668 MS4A3Q96HJ5 214 aa13.95□□□□□ -0.18
SMG1-206ENST00000562668 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
SMG1-206ENST00000562668 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
SMG1-206ENST00000562668 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
SMG1-206ENST00000562668 MAP3K13O43283 966 aa13.84□□□□□ -0.19
SMG1-206ENST00000562668 IFNLR1Q8IU57 520 aaPredicted RBP13.82□□□□□ -0.2
SMG1-206ENST00000562668 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
SMG1-206ENST00000562668 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
SMG1-206ENST00000562668 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
SMG1-206ENST00000562668 PCDHB13Q9Y5F0 798 aa13.76□□□□□ -0.21
SMG1-206ENST00000562668 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
SMG1-206ENST00000562668 ATMINO43313 823 aaPredicted RBP13.74□□□□□ -0.21
SMG1-206ENST00000562668 GSE1Q14687 1217 aa13.74□□□□□ -0.21
SMG1-206ENST00000562668 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
SMG1-206ENST00000562668 LHX8Q68G74 356 aa13.72□□□□□ -0.21
SMG1-206ENST00000562668 TIE1P35590 1138 aa13.71□□□□□ -0.21
SMG1-206ENST00000562668 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.21
SMG1-206ENST00000562668 PYGBP11216 843 aa13.7□□□□□ -0.22
SMG1-206ENST00000562668 BMP2KQ9NSY1 1161 aaPredicted RBP13.7□□□□□ -0.22
SMG1-206ENST00000562668 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
SMG1-206ENST00000562668 ATN1P54259 1190 aaPredicted RBP13.67□□□□□ -0.22
SMG1-206ENST00000562668 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
SMG1-206ENST00000562668 TTLL13PA6NNM8 815 aa13.63□□□□□ -0.23
SMG1-206ENST00000562668 METRNQ9UJH8 293 aa13.63□□□□□ -0.23
SMG1-206ENST00000562668 C7P10643 843 aa13.6□□□□□ -0.23
SMG1-206ENST00000562668 CIZ1Q9ULV3 898 aaPredicted RBP13.6□□□□□ -0.23
SMG1-206ENST00000562668 CHRM1P11229 460 aaPredicted RBP13.58□□□□□ -0.24
SMG1-206ENST00000562668 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
SMG1-206ENST00000562668 ZNF467Q7Z7K2 595 aaPredicted RBP13.55□□□□□ -0.24
SMG1-206ENST00000562668 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
SMG1-206ENST00000562668 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
SMG1-206ENST00000562668 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
SMG1-206ENST00000562668 IER5LQ5T953 404 aa13.48□□□□□ -0.25
SMG1-206ENST00000562668 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
SMG1-206ENST00000562668 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
SMG1-206ENST00000562668 SEC24BO95487 1268 aa13.42□□□□□ -0.26
SMG1-206ENST00000562668 COLQQ9Y215 455 aaPredicted RBP13.41□□□□□ -0.26
SMG1-206ENST00000562668 PSEN1P49768 467 aa13.4□□□□□ -0.26
SMG1-206ENST00000562668 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
SMG1-206ENST00000562668 PDAP1Q13442 181 aaKnown RBP13.39□□□□□ -0.27
SMG1-206ENST00000562668 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
SMG1-206ENST00000562668 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
SMG1-206ENST00000562668 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
SMG1-206ENST00000562668 PLCG2P16885 1265 aa13.33□□□□□ -0.28
SMG1-206ENST00000562668 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
SMG1-206ENST00000562668 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
SMG1-206ENST00000562668 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
SMG1-206ENST00000562668 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
SMG1-206ENST00000562668 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
SMG1-206ENST00000562668 OCEL1Q9H607 264 aa13.27□□□□□ -0.29
SMG1-206ENST00000562668 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
SMG1-206ENST00000562668 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.29
SMG1-206ENST00000562668 VGFO15240 615 aaPredicted RBP13.2□□□□□ -0.3
SMG1-206ENST00000562668 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
SMG1-206ENST00000562668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.34e-13■■□□□ 14.2
SMG1-206ENST00000562668 PKD2Q13563 968 aa13.18□□□□□ -0.3
SMG1-206ENST00000562668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
SMG1-206ENST00000562668 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
SMG1-206ENST00000562668 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
SMG1-206ENST00000562668 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
SMG1-206ENST00000562668 EFCAB3Q8N7B9 438 aa13.11□□□□□ -0.31
SMG1-206ENST00000562668 RGL2O15211 777 aa13.08□□□□□ -0.32
SMG1-206ENST00000562668 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
SMG1-206ENST00000562668 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
SMG1-206ENST00000562668 BCL11BQ9C0K0 894 aaPredicted RBP13.05□□□□□ -0.32
SMG1-206ENST00000562668 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
SMG1-206ENST00000562668 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
SMG1-206ENST00000562668 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
SMG1-206ENST00000562668 SOX12O15370 315 aa13.01□□□□□ -0.33
SMG1-206ENST00000562668 STK24Q9Y6E0 443 aa13.01□□□□□ -0.33
SMG1-206ENST00000562668 STK25O00506 426 aa13□□□□□ -0.33
SMG1-206ENST00000562668 G3V3G9 751 aa12.98□□□□□ -0.33
SMG1-206ENST00000562668 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
SMG1-206ENST00000562668 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
SMG1-206ENST00000562668 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
SMG1-206ENST00000562668 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
SMG1-206ENST00000562668 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
SMG1-206ENST00000562668 POTEMA6NI47 508 aa12.91□□□□□ -0.34
SMG1-206ENST00000562668 NLRP6P59044 892 aa12.9□□□□□ -0.34
SMG1-206ENST00000562668 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
SMG1-206ENST00000562668 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
SMG1-206ENST00000562668 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
SMG1-206ENST00000562668 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
SMG1-206ENST00000562668 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
SMG1-206ENST00000562668 SNPHO15079 494 aa12.86□□□□□ -0.35
SMG1-206ENST00000562668 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
SMG1-206ENST00000562668 ST18O60284 1047 aa12.82□□□□□ -0.36
SMG1-206ENST00000562668 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
SMG1-206ENST00000562668 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
SMG1-206ENST00000562668 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
SMG1-206ENST00000562668 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
SMG1-206ENST00000562668 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
SMG1-206ENST00000562668 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
SMG1-206ENST00000562668 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
SMG1-206ENST00000562668 PPP1R37O75864 691 aa12.64□□□□□ -0.39
SMG1-206ENST00000562668 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
SMG1-206ENST00000562668 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms