RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 MIER1Q8N108 512 aa7.68□□□□□ -1.18
CHD9-204ENST00000561869 RASEFQ8IZ41 740 aa7.67□□□□□ -1.18
CHD9-204ENST00000561869 VASPP50552 380 aaPredicted RBP7.64□□□□□ -1.19
CHD9-204ENST00000561869 KIF12Q96FN5 646 aa7.64□□□□□ -1.19
CHD9-204ENST00000561869 ATMINO43313 823 aaPredicted RBP7.63□□□□□ -1.19
CHD9-204ENST00000561869 ASTLQ6HA08 431 aaPredicted RBP7.63□□□□□ -1.19
CHD9-204ENST00000561869 PLCD3Q8N3E9 789 aa7.63□□□□□ -1.19
CHD9-204ENST00000561869 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
CHD9-204ENST00000561869 OTUD5Q96G74 571 aa7.61□□□□□ -1.19
CHD9-204ENST00000561869 MAP3K13O43283 966 aa7.6□□□□□ -1.19
CHD9-204ENST00000561869 PLEKHG5O94827 1062 aa7.6□□□□□ -1.19
CHD9-204ENST00000561869 NUBP1P53384 320 aa7.59□□□□□ -1.19
CHD9-204ENST00000561869 METRNQ9UJH8 293 aa7.59□□□□□ -1.19
CHD9-204ENST00000561869 POTEJP0CG39 1038 aa7.58□□□□□ -1.2
CHD9-204ENST00000561869 ATN1P54259 1190 aaPredicted RBP7.58□□□□□ -1.2
CHD9-204ENST00000561869 BMP2KQ9NSY1 1161 aaPredicted RBP7.57□□□□□ -1.2
CHD9-204ENST00000561869 IFNLR1Q8IU57 520 aaPredicted RBP7.56□□□□□ -1.2
CHD9-204ENST00000561869 SLC39A7Q92504 469 aa7.55□□□□□ -1.2
CHD9-204ENST00000561869 ZBTB47Q9UFB7 747 aaPredicted RBP7.55□□□□□ -1.2
CHD9-204ENST00000561869 C7P10643 843 aa7.54□□□□□ -1.2
CHD9-204ENST00000561869 POTEFA5A3E0 1075 aa7.53□□□□□ -1.2
CHD9-204ENST00000561869 TIE1P35590 1138 aa7.51□□□□□ -1.21
CHD9-204ENST00000561869 TTLL13PA6NNM8 815 aa7.5□□□□□ -1.21
CHD9-204ENST00000561869 KLHL34Q8N239 644 aa7.49□□□□□ -1.21
CHD9-204ENST00000561869 PCDHB13Q9Y5F0 798 aa7.49□□□□□ -1.21
CHD9-204ENST00000561869 IFNL1Q8IU54 200 aa7.48□□□□□ -1.21
CHD9-204ENST00000561869 FAM212AQ96EL1 285 aa7.47□□□□□ -1.21
CHD9-204ENST00000561869 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
CHD9-204ENST00000561869 SGIP1Q9BQI5 828 aa7.46□□□□□ -1.22
CHD9-204ENST00000561869 SPOCK2Q92563 424 aa7.45□□□□□ -1.22
CHD9-204ENST00000561869 TRIM35Q9UPQ4 493 aa7.44□□□□□ -1.22
CHD9-204ENST00000561869 PYGBP11216 843 aa7.42□□□□□ -1.22
CHD9-204ENST00000561869 DCAF8Q5TAQ9 597 aa7.42□□□□□ -1.22
CHD9-204ENST00000561869 MAMSTRQ6ZN01 415 aa7.41□□□□□ -1.22
CHD9-204ENST00000561869 TMEM106CQ9BVX2 250 aa7.41□□□□□ -1.22
CHD9-204ENST00000561869 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
CHD9-204ENST00000561869 PCDHB8Q9UN66 801 aa7.39□□□□□ -1.23
CHD9-204ENST00000561869 SEC24BO95487 1268 aa7.38□□□□□ -1.23
CHD9-204ENST00000561869 IER5LQ5T953 404 aa7.38□□□□□ -1.23
CHD9-204ENST00000561869 SCUBE2Q9NQ36 999 aa7.38□□□□□ -1.23
CHD9-204ENST00000561869 POTEMA6NI47 508 aa7.37□□□□□ -1.23
CHD9-204ENST00000561869 GSE1Q14687 1217 aa7.37□□□□□ -1.23
CHD9-204ENST00000561869 POTEGQ6S5H5 508 aa7.37□□□□□ -1.23
CHD9-204ENST00000561869 CHRM1P11229 460 aaPredicted RBP7.34□□□□□ -1.23
CHD9-204ENST00000561869 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
CHD9-204ENST00000561869 PLSCR2Q9NRY7 297 aa7.33□□□□□ -1.24
CHD9-204ENST00000561869 CIZ1Q9ULV3 898 aaPredicted RBP7.33□□□□□ -1.24
CHD9-204ENST00000561869 FAM163AQ96GL9 167 aaPredicted RBP7.32□□□□□ -1.24
CHD9-204ENST00000561869 PLCG2P16885 1265 aa7.31□□□□□ -1.24
CHD9-204ENST00000561869 PKD2Q13563 968 aa7.27□□□□□ -1.25
CHD9-204ENST00000561869 OCEL1Q9H607 264 aa7.27□□□□□ -1.25
CHD9-204ENST00000561869 ZNF467Q7Z7K2 595 aaPredicted RBP7.26□□□□□ -1.25
CHD9-204ENST00000561869 SLAIN1Q8ND83 568 aa7.26□□□□□ -1.25
CHD9-204ENST00000561869 TRIM41Q8WV44 630 aa7.26□□□□□ -1.25
CHD9-204ENST00000561869 PSEN1P49768 467 aa7.24□□□□□ -1.25
CHD9-204ENST00000561869 PDCD7Q8N8D1 485 aaKnown RBP7.24□□□□□ -1.25
CHD9-204ENST00000561869 RNF25Q96BH1 459 aaPredicted RBP7.23□□□□□ -1.25
CHD9-204ENST00000561869 ST18O60284 1047 aa7.2□□□□□ -1.26
CHD9-204ENST00000561869 ECM2O94769 699 aaPredicted RBP7.19□□□□□ -1.26
CHD9-204ENST00000561869 PDAP1Q13442 181 aaKnown RBP7.19□□□□□ -1.26
CHD9-204ENST00000561869 MKRN3Q13064 507 aaKnown RBP7.18□□□□□ -1.26
CHD9-204ENST00000561869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHD9-204ENST00000561869 PCDH10Q9P2E7 1040 aa7.18□□□□□ -1.26
CHD9-204ENST00000561869 RIOK3O14730 519 aaKnown RBP7.17□□□□□ -1.26
CHD9-204ENST00000561869 DPY19L2Q6NUT2 758 aa7.17□□□□□ -1.26
CHD9-204ENST00000561869 ILDR1Q86SU0 546 aaPredicted RBP7.17□□□□□ -1.26
CHD9-204ENST00000561869 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
CHD9-204ENST00000561869 CABP2Q9NPB3 220 aa7.16□□□□□ -1.26
CHD9-204ENST00000561869 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.16□□□□□ -1.26
CHD9-204ENST00000561869 RGL2O15211 777 aa7.15□□□□□ -1.26
CHD9-204ENST00000561869 VGFO15240 615 aaPredicted RBP7.12□□□□□ -1.27
CHD9-204ENST00000561869 C3orf67Q6ZVT6 689 aa7.12□□□□□ -1.27
CHD9-204ENST00000561869 CDAN1Q8IWY9 1227 aa7.12□□□□□ -1.27
CHD9-204ENST00000561869 L3MBTL3Q96JM7 780 aaPredicted RBP7.12□□□□□ -1.27
CHD9-204ENST00000561869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.11□□□□□ -1.27
CHD9-204ENST00000561869 ZFP91Q96JP5 570 aaPredicted RBP7.11□□□□□ -1.27
CHD9-204ENST00000561869 MARVELD3Q96A59 401 aa7.1□□□□□ -1.27
CHD9-204ENST00000561869 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
CHD9-204ENST00000561869 SNPHO15079 494 aa7.07□□□□□ -1.28
CHD9-204ENST00000561869 TMEM121BQ9BXQ6 578 aaPredicted RBP7.07□□□□□ -1.28
CHD9-204ENST00000561869 BOLA1Q9Y3E2 137 aa7.07□□□□□ -1.28
CHD9-204ENST00000561869 RTN4Q9NQC3 1192 aaKnown RBP7.06□□□□□ -1.28
CHD9-204ENST00000561869 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
CHD9-204ENST00000561869 POTEB3A0JP26 581 aa7.04□□□□□ -1.28
CHD9-204ENST00000561869 AMER1Q5JTC6 1135 aaPredicted RBP7.04□□□□□ -1.28
CHD9-204ENST00000561869 POTEBQ6S5H4 581 aa7.04□□□□□ -1.28
CHD9-204ENST00000561869 BCL11BQ9C0K0 894 aaPredicted RBP7.04□□□□□ -1.28
CHD9-204ENST00000561869 STK25O00506 426 aa7.02□□□□□ -1.29
CHD9-204ENST00000561869 HOXB3P14651 431 aaPredicted RBP7.02□□□□□ -1.29
CHD9-204ENST00000561869 MS4A4AQ96JQ5 239 aa7.02□□□□□ -1.29
CHD9-204ENST00000561869 STK24Q9Y6E0 443 aa7.02□□□□□ -1.29
CHD9-204ENST00000561869 EMP3P54852 163 aa7□□□□□ -1.29
CHD9-204ENST00000561869 TMEM92Q6UXU6 159 aa7□□□□□ -1.29
CHD9-204ENST00000561869 HS6ST3Q8IZP7 471 aa7□□□□□ -1.29
CHD9-204ENST00000561869 G3V3G9 751 aa6.99□□□□□ -1.29
CHD9-204ENST00000561869 SOX12O15370 315 aa6.99□□□□□ -1.29
CHD9-204ENST00000561869 MICALL2Q8IY33 904 aa6.99□□□□□ -1.29
CHD9-204ENST00000561869 PHF8Q9UPP1 1060 aa6.99□□□□□ -1.29
CHD9-204ENST00000561869 SPNS2Q8IVW8 549 aa6.98□□□□□ -1.29
CHD9-204ENST00000561869 FAM205CA6NFA0 338 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms