RNA–Protein interactions for RNA: ENST00000561563.6

AC135983.2-202, humanhuman

TSL 1 (best)

Gene AC135983.2, Length 1,673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135983.2-202ENST00000561563 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
AC135983.2-202ENST00000561563 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
AC135983.2-202ENST00000561563 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
AC135983.2-202ENST00000561563 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
AC135983.2-202ENST00000561563 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
AC135983.2-202ENST00000561563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
AC135983.2-202ENST00000561563 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
AC135983.2-202ENST00000561563 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
AC135983.2-202ENST00000561563 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
AC135983.2-202ENST00000561563 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
AC135983.2-202ENST00000561563 RAD21O60216 631 aa13.28□□□□□ -0.28
AC135983.2-202ENST00000561563 RGS22Q8NE09 1264 aa13.26□□□□□ -0.29
AC135983.2-202ENST00000561563 APBB1O00213 710 aa13.23□□□□□ -0.29
AC135983.2-202ENST00000561563 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.3
AC135983.2-202ENST00000561563 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
AC135983.2-202ENST00000561563 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
AC135983.2-202ENST00000561563 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
AC135983.2-202ENST00000561563 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
AC135983.2-202ENST00000561563 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
AC135983.2-202ENST00000561563 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
AC135983.2-202ENST00000561563 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
AC135983.2-202ENST00000561563 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
AC135983.2-202ENST00000561563 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
AC135983.2-202ENST00000561563 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.31
AC135983.2-202ENST00000561563 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.31
AC135983.2-202ENST00000561563 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
AC135983.2-202ENST00000561563 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
AC135983.2-202ENST00000561563 CCDC82Q8N4S0 544 aa13.04□□□□□ -0.32
AC135983.2-202ENST00000561563 TRAIPQ9BWF2 469 aa13.04□□□□□ -0.32
AC135983.2-202ENST00000561563 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
AC135983.2-202ENST00000561563 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
AC135983.2-202ENST00000561563 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
AC135983.2-202ENST00000561563 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
AC135983.2-202ENST00000561563 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
AC135983.2-202ENST00000561563 POLR3GLQ9BT43 218 aa12.96□□□□□ -0.34
AC135983.2-202ENST00000561563 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
AC135983.2-202ENST00000561563 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
AC135983.2-202ENST00000561563 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
AC135983.2-202ENST00000561563 E9PSI1 815 aa12.92□□□□□ -0.34
AC135983.2-202ENST00000561563 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
AC135983.2-202ENST00000561563 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
AC135983.2-202ENST00000561563 FAM9AQ8IZU1 332 aaPredicted RBP12.89□□□□□ -0.35
AC135983.2-202ENST00000561563 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
AC135983.2-202ENST00000561563 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
AC135983.2-202ENST00000561563 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
AC135983.2-202ENST00000561563 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
AC135983.2-202ENST00000561563 ZMYND10O75800 440 aa12.84□□□□□ -0.35
AC135983.2-202ENST00000561563 PDE4CQ08493 712 aa12.83□□□□□ -0.36
AC135983.2-202ENST00000561563 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
AC135983.2-202ENST00000561563 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
AC135983.2-202ENST00000561563 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
AC135983.2-202ENST00000561563 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
AC135983.2-202ENST00000561563 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
AC135983.2-202ENST00000561563 TRAK2O60296 914 aa12.76□□□□□ -0.37
AC135983.2-202ENST00000561563 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
AC135983.2-202ENST00000561563 KDM4CQ9H3R0 1056 aa12.76□□□□□ -0.37
AC135983.2-202ENST00000561563 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
AC135983.2-202ENST00000561563 FLIIQ13045 1269 aa12.74□□□□□ -0.37
AC135983.2-202ENST00000561563 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
AC135983.2-202ENST00000561563 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
AC135983.2-202ENST00000561563 A6NJR5 290 aa12.69□□□□□ -0.38
AC135983.2-202ENST00000561563 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
AC135983.2-202ENST00000561563 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
AC135983.2-202ENST00000561563 IRF5Q13568 498 aa12.67□□□□□ -0.38
AC135983.2-202ENST00000561563 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
AC135983.2-202ENST00000561563 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
AC135983.2-202ENST00000561563 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
AC135983.2-202ENST00000561563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
AC135983.2-202ENST00000561563 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
AC135983.2-202ENST00000561563 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
AC135983.2-202ENST00000561563 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
AC135983.2-202ENST00000561563 SEMA3EO15041 775 aa12.64□□□□□ -0.39
AC135983.2-202ENST00000561563 AK7Q96M32 723 aa12.64□□□□□ -0.39
AC135983.2-202ENST00000561563 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
AC135983.2-202ENST00000561563 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
AC135983.2-202ENST00000561563 POLA2Q14181 598 aa12.61□□□□□ -0.39
AC135983.2-202ENST00000561563 BCCIPQ9P287 314 aaKnown RBP eCLIP12.61□□□□□ -0.39
AC135983.2-202ENST00000561563 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
AC135983.2-202ENST00000561563 CCDC125Q86Z20 511 aa12.6□□□□□ -0.39
AC135983.2-202ENST00000561563 STK25O00506 426 aa12.57□□□□□ -0.4
AC135983.2-202ENST00000561563 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
AC135983.2-202ENST00000561563 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
AC135983.2-202ENST00000561563 ZNF777Q9ULD5 760 aaPredicted RBP12.55□□□□□ -0.4
AC135983.2-202ENST00000561563 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
AC135983.2-202ENST00000561563 SERPINA10Q9UK55 444 aa12.54□□□□□ -0.4
AC135983.2-202ENST00000561563 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
AC135983.2-202ENST00000561563 AMOTL2Q9Y2J4 779 aa12.54□□□□□ -0.4
AC135983.2-202ENST00000561563 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
AC135983.2-202ENST00000561563 FAM117AQ9C073 453 aa12.53□□□□□ -0.4
AC135983.2-202ENST00000561563 ZNF592Q92610 1267 aa12.52□□□□□ -0.4
AC135983.2-202ENST00000561563 BCL11AQ9H165 835 aa12.52□□□□□ -0.4
AC135983.2-202ENST00000561563 NEFLP07196 543 aa12.51□□□□□ -0.41
AC135983.2-202ENST00000561563 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
AC135983.2-202ENST00000561563 PDE4DQ08499 809 aa12.51□□□□□ -0.41
AC135983.2-202ENST00000561563 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
AC135983.2-202ENST00000561563 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
AC135983.2-202ENST00000561563 MIER1Q8N108 512 aa12.48□□□□□ -0.41
AC135983.2-202ENST00000561563 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
AC135983.2-202ENST00000561563 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
AC135983.2-202ENST00000561563 PSMD1Q99460 953 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms