RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
HMG20A-212ENST00000560986 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
HMG20A-212ENST00000560986 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
HMG20A-212ENST00000560986 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
HMG20A-212ENST00000560986 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
HMG20A-212ENST00000560986 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
HMG20A-212ENST00000560986 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
HMG20A-212ENST00000560986 NUBP1P53384 320 aa11.82□□□□□ -0.52
HMG20A-212ENST00000560986 MAP3K13O43283 966 aa11.81□□□□□ -0.52
HMG20A-212ENST00000560986 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
HMG20A-212ENST00000560986 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
HMG20A-212ENST00000560986 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
HMG20A-212ENST00000560986 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
HMG20A-212ENST00000560986 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.53
HMG20A-212ENST00000560986 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
HMG20A-212ENST00000560986 C7P10643 843 aa11.75□□□□□ -0.53
HMG20A-212ENST00000560986 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
HMG20A-212ENST00000560986 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
HMG20A-212ENST00000560986 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
HMG20A-212ENST00000560986 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
HMG20A-212ENST00000560986 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
HMG20A-212ENST00000560986 TIE1P35590 1138 aa11.69□□□□□ -0.54
HMG20A-212ENST00000560986 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
HMG20A-212ENST00000560986 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
HMG20A-212ENST00000560986 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
HMG20A-212ENST00000560986 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
HMG20A-212ENST00000560986 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
HMG20A-212ENST00000560986 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
HMG20A-212ENST00000560986 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
HMG20A-212ENST00000560986 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
HMG20A-212ENST00000560986 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
HMG20A-212ENST00000560986 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
HMG20A-212ENST00000560986 PYGBP11216 843 aa11.56□□□□□ -0.56
HMG20A-212ENST00000560986 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
HMG20A-212ENST00000560986 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
HMG20A-212ENST00000560986 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
HMG20A-212ENST00000560986 IER5LQ5T953 404 aa11.51□□□□□ -0.57
HMG20A-212ENST00000560986 SEC24BO95487 1268 aa11.5□□□□□ -0.57
HMG20A-212ENST00000560986 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
HMG20A-212ENST00000560986 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
HMG20A-212ENST00000560986 GSE1Q14687 1217 aa11.44□□□□□ -0.58
HMG20A-212ENST00000560986 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
HMG20A-212ENST00000560986 POTEMA6NI47 508 aa11.42□□□□□ -0.58
HMG20A-212ENST00000560986 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
HMG20A-212ENST00000560986 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.58
HMG20A-212ENST00000560986 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
HMG20A-212ENST00000560986 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
HMG20A-212ENST00000560986 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
HMG20A-212ENST00000560986 PLCG2P16885 1265 aa11.36□□□□□ -0.59
HMG20A-212ENST00000560986 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
HMG20A-212ENST00000560986 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
HMG20A-212ENST00000560986 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
HMG20A-212ENST00000560986 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
HMG20A-212ENST00000560986 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
HMG20A-212ENST00000560986 PSEN1P49768 467 aa11.28□□□□□ -0.6
HMG20A-212ENST00000560986 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
HMG20A-212ENST00000560986 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
HMG20A-212ENST00000560986 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
HMG20A-212ENST00000560986 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
HMG20A-212ENST00000560986 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
HMG20A-212ENST00000560986 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
HMG20A-212ENST00000560986 PCDH10Q9P2E7 1040 aa11.2□□□□□ -0.62
HMG20A-212ENST00000560986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
HMG20A-212ENST00000560986 ST18O60284 1047 aa11.17□□□□□ -0.62
HMG20A-212ENST00000560986 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
HMG20A-212ENST00000560986 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
HMG20A-212ENST00000560986 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
HMG20A-212ENST00000560986 PKD2Q13563 968 aa11.13□□□□□ -0.63
HMG20A-212ENST00000560986 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
HMG20A-212ENST00000560986 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-212ENST00000560986 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
HMG20A-212ENST00000560986 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
HMG20A-212ENST00000560986 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
HMG20A-212ENST00000560986 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
HMG20A-212ENST00000560986 RNF25Q96BH1 459 aaPredicted RBP11.05□□□□□ -0.64
HMG20A-212ENST00000560986 SNPHO15079 494 aa11.04□□□□□ -0.64
HMG20A-212ENST00000560986 EFCAB3Q8N7B9 438 aa11.03□□□□□ -0.64
HMG20A-212ENST00000560986 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
HMG20A-212ENST00000560986 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
HMG20A-212ENST00000560986 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
HMG20A-212ENST00000560986 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
HMG20A-212ENST00000560986 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
HMG20A-212ENST00000560986 MARVELD3Q96A59 401 aa10.99□□□□□ -0.65
HMG20A-212ENST00000560986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
HMG20A-212ENST00000560986 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
HMG20A-212ENST00000560986 G3V3G9 751 aa10.93□□□□□ -0.66
HMG20A-212ENST00000560986 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
HMG20A-212ENST00000560986 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
HMG20A-212ENST00000560986 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
HMG20A-212ENST00000560986 SOX12O15370 315 aa10.89□□□□□ -0.67
HMG20A-212ENST00000560986 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
HMG20A-212ENST00000560986 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
HMG20A-212ENST00000560986 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
HMG20A-212ENST00000560986 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
HMG20A-212ENST00000560986 RGL2O15211 777 aa10.87□□□□□ -0.67
HMG20A-212ENST00000560986 EMP3P54852 163 aa10.87□□□□□ -0.67
HMG20A-212ENST00000560986 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
HMG20A-212ENST00000560986 TMEM92Q6UXU6 159 aa10.85□□□□□ -0.67
HMG20A-212ENST00000560986 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
HMG20A-212ENST00000560986 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms