RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
TMOD3-207ENST00000560549 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
TMOD3-207ENST00000560549 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
TMOD3-207ENST00000560549 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
TMOD3-207ENST00000560549 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.6
TMOD3-207ENST00000560549 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
TMOD3-207ENST00000560549 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
TMOD3-207ENST00000560549 MAP3K13O43283 966 aa11.21□□□□□ -0.61
TMOD3-207ENST00000560549 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
TMOD3-207ENST00000560549 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
TMOD3-207ENST00000560549 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
TMOD3-207ENST00000560549 ATMINO43313 823 aaPredicted RBP11.14□□□□□ -0.63
TMOD3-207ENST00000560549 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
TMOD3-207ENST00000560549 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
TMOD3-207ENST00000560549 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
TMOD3-207ENST00000560549 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
TMOD3-207ENST00000560549 GSE1Q14687 1217 aa11.12□□□□□ -0.63
TMOD3-207ENST00000560549 TIE1P35590 1138 aa11.11□□□□□ -0.63
TMOD3-207ENST00000560549 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
TMOD3-207ENST00000560549 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
TMOD3-207ENST00000560549 LHX8Q68G74 356 aa11.09□□□□□ -0.63
TMOD3-207ENST00000560549 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
TMOD3-207ENST00000560549 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.64
TMOD3-207ENST00000560549 PYGBP11216 843 aa11.06□□□□□ -0.64
TMOD3-207ENST00000560549 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
TMOD3-207ENST00000560549 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
TMOD3-207ENST00000560549 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
TMOD3-207ENST00000560549 C7P10643 843 aa11.01□□□□□ -0.65
TMOD3-207ENST00000560549 METRNQ9UJH8 293 aa11□□□□□ -0.65
TMOD3-207ENST00000560549 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
TMOD3-207ENST00000560549 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
TMOD3-207ENST00000560549 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
TMOD3-207ENST00000560549 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
TMOD3-207ENST00000560549 POTEFA5A3E0 1075 aa10.95□□□□□ -0.66
TMOD3-207ENST00000560549 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
TMOD3-207ENST00000560549 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
TMOD3-207ENST00000560549 IER5LQ5T953 404 aa10.93□□□□□ -0.66
TMOD3-207ENST00000560549 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
TMOD3-207ENST00000560549 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
TMOD3-207ENST00000560549 OTUD5Q96G74 571 aa10.87□□□□□ -0.67
TMOD3-207ENST00000560549 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
TMOD3-207ENST00000560549 PKD2Q13563 968 aa10.86□□□□□ -0.67
TMOD3-207ENST00000560549 PSEN1P49768 467 aa10.84□□□□□ -0.67
TMOD3-207ENST00000560549 PDAP1Q13442 181 aaKnown RBP10.84□□□□□ -0.67
TMOD3-207ENST00000560549 RNF25Q96BH1 459 aaPredicted RBP10.84□□□□□ -0.67
TMOD3-207ENST00000560549 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
TMOD3-207ENST00000560549 SEC24BO95487 1268 aa10.78□□□□□ -0.68
TMOD3-207ENST00000560549 MAMSTRQ6ZN01 415 aa10.77□□□□□ -0.69
TMOD3-207ENST00000560549 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
TMOD3-207ENST00000560549 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
TMOD3-207ENST00000560549 PLCG2P16885 1265 aa10.74□□□□□ -0.69
TMOD3-207ENST00000560549 OCEL1Q9H607 264 aa10.74□□□□□ -0.69
TMOD3-207ENST00000560549 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
TMOD3-207ENST00000560549 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
TMOD3-207ENST00000560549 RGL2O15211 777 aa10.71□□□□□ -0.69
TMOD3-207ENST00000560549 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
TMOD3-207ENST00000560549 SCUBE2Q9NQ36 999 aa10.7□□□□□ -0.7
TMOD3-207ENST00000560549 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
TMOD3-207ENST00000560549 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
TMOD3-207ENST00000560549 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
TMOD3-207ENST00000560549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
TMOD3-207ENST00000560549 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
TMOD3-207ENST00000560549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.72e-8■■■■■ 32.3
TMOD3-207ENST00000560549 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
TMOD3-207ENST00000560549 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
TMOD3-207ENST00000560549 L3MBTL3Q96JM7 780 aaPredicted RBP10.58□□□□□ -0.72
TMOD3-207ENST00000560549 SOX12O15370 315 aa10.56□□□□□ -0.72
TMOD3-207ENST00000560549 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
TMOD3-207ENST00000560549 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
TMOD3-207ENST00000560549 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
TMOD3-207ENST00000560549 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
TMOD3-207ENST00000560549 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
TMOD3-207ENST00000560549 MS4A4AQ96JQ5 239 aa10.52□□□□□ -0.73
TMOD3-207ENST00000560549 TMEM121BQ9BXQ6 578 aaPredicted RBP10.52□□□□□ -0.73
TMOD3-207ENST00000560549 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
TMOD3-207ENST00000560549 STK25O00506 426 aa10.5□□□□□ -0.73
TMOD3-207ENST00000560549 PHF8Q9UPP1 1060 aa10.49□□□□□ -0.73
TMOD3-207ENST00000560549 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
TMOD3-207ENST00000560549 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
TMOD3-207ENST00000560549 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
TMOD3-207ENST00000560549 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
TMOD3-207ENST00000560549 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
TMOD3-207ENST00000560549 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
TMOD3-207ENST00000560549 NLRP6P59044 892 aa10.44□□□□□ -0.74
TMOD3-207ENST00000560549 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
TMOD3-207ENST00000560549 FAM163AQ96GL9 167 aaPredicted RBP10.42□□□□□ -0.74
TMOD3-207ENST00000560549 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
TMOD3-207ENST00000560549 CHGAP10645 457 aaKnown RBP10.41□□□□□ -0.74
TMOD3-207ENST00000560549 POTEMA6NI47 508 aa10.4□□□□□ -0.74
TMOD3-207ENST00000560549 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
TMOD3-207ENST00000560549 G3V3G9 751 aa10.39□□□□□ -0.75
TMOD3-207ENST00000560549 POTEGQ6S5H5 508 aa10.39□□□□□ -0.75
TMOD3-207ENST00000560549 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
TMOD3-207ENST00000560549 SNPHO15079 494 aa10.37□□□□□ -0.75
TMOD3-207ENST00000560549 ST18O60284 1047 aa10.36□□□□□ -0.75
TMOD3-207ENST00000560549 TMEM92Q6UXU6 159 aa10.36□□□□□ -0.75
TMOD3-207ENST00000560549 DCAF8L2P0C7V8 631 aa10.35□□□□□ -0.75
TMOD3-207ENST00000560549 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
TMOD3-207ENST00000560549 PPP1R37O75864 691 aa10.3□□□□□ -0.76
TMOD3-207ENST00000560549 PCDH10Q9P2E7 1040 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms