RNA–Protein interactions for RNA: ENST00000560158.6

LRRC49-222, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5 BASIC

Gene LRRC49, Length 1,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-222ENST00000560158 CLCN6P51797 869 aa8□□□□□ -1.13
LRRC49-222ENST00000560158 DCBLD2Q96PD2 775 aa8□□□□□ -1.13
LRRC49-222ENST00000560158 ECM2O94769 699 aaPredicted RBP7.98□□□□□ -1.13
LRRC49-222ENST00000560158 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
LRRC49-222ENST00000560158 CDAN1Q8IWY9 1227 aa7.97□□□□□ -1.13
LRRC49-222ENST00000560158 MMRN1Q13201 1228 aa7.96□□□□□ -1.13
LRRC49-222ENST00000560158 DNAJC5Q9H3Z4 198 aa7.96□□□□□ -1.13
LRRC49-222ENST00000560158 TULP1O00294 542 aaPredicted RBP7.94□□□□□ -1.14
LRRC49-222ENST00000560158 FAM163AQ96GL9 167 aaPredicted RBP7.93□□□□□ -1.14
LRRC49-222ENST00000560158 SPOCK2Q92563 424 aa7.92□□□□□ -1.14
LRRC49-222ENST00000560158 SPRYD3Q8NCJ5 442 aa7.89□□□□□ -1.15
LRRC49-222ENST00000560158 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
LRRC49-222ENST00000560158 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
LRRC49-222ENST00000560158 SPNS2Q8IVW8 549 aa7.83□□□□□ -1.16
LRRC49-222ENST00000560158 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
LRRC49-222ENST00000560158 OSCARQ8IYS5 282 aa7.8□□□□□ -1.16
LRRC49-222ENST00000560158 RNF25Q96BH1 459 aaPredicted RBP7.79□□□□□ -1.16
LRRC49-222ENST00000560158 ZBTB12Q9Y330 459 aaPredicted RBP7.79□□□□□ -1.16
LRRC49-222ENST00000560158 NBR1Q14596 966 aa7.78□□□□□ -1.16
LRRC49-222ENST00000560158 NKX1-1Q15270 411 aaPredicted RBP7.77□□□□□ -1.17
LRRC49-222ENST00000560158 DAXXQ9UER7 740 aaPredicted RBP7.76□□□□□ -1.17
LRRC49-222ENST00000560158 HS6ST3Q8IZP7 471 aa7.75□□□□□ -1.17
LRRC49-222ENST00000560158 MAMSTRQ6ZN01 415 aa7.74□□□□□ -1.17
LRRC49-222ENST00000560158 CD44P16070 742 aaKnown RBP7.73□□□□□ -1.17
LRRC49-222ENST00000560158 ARXQ96QS3 562 aa7.73□□□□□ -1.17
LRRC49-222ENST00000560158 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
LRRC49-222ENST00000560158 PLCD3Q8N3E9 789 aa7.71□□□□□ -1.18
LRRC49-222ENST00000560158 POTEJP0CG39 1038 aa7.7□□□□□ -1.18
LRRC49-222ENST00000560158 CIZ1Q9ULV3 898 aaPredicted RBP7.69□□□□□ -1.18
LRRC49-222ENST00000560158 SSUH2Q9Y2M2 353 aa7.69□□□□□ -1.18
LRRC49-222ENST00000560158 GTPBP6O43824 516 aaPredicted RBP7.68□□□□□ -1.18
LRRC49-222ENST00000560158 STAG3Q9UJ98 1225 aa7.68□□□□□ -1.18
LRRC49-222ENST00000560158 MIER1Q8N108 512 aa7.66□□□□□ -1.18
LRRC49-222ENST00000560158 CHADLQ6NUI6 762 aa7.65□□□□□ -1.18
LRRC49-222ENST00000560158 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
LRRC49-222ENST00000560158 PABPN1Q86U42 306 aaKnown RBP eCLIP7.63□□□□□ -1.19
LRRC49-222ENST00000560158 SPDYE1Q8NFV5 336 aaPredicted RBP7.63□□□□□ -1.19
LRRC49-222ENST00000560158 CLEC11AQ9Y240 323 aa7.63□□□□□ -1.19
LRRC49-222ENST00000560158 ZNF579Q8NAF0 562 aaKnown RBP7.59□□□□□ -1.19
LRRC49-222ENST00000560158 SCUBE2Q9NQ36 999 aa7.58□□□□□ -1.2
LRRC49-222ENST00000560158 SPDYE2BA6NHP3 402 aa7.56□□□□□ -1.2
LRRC49-222ENST00000560158 SPDYE6P0CI01 402 aa7.56□□□□□ -1.2
LRRC49-222ENST00000560158 SPDYE2Q495Y8 402 aa7.56□□□□□ -1.2
LRRC49-222ENST00000560158 C14orf37Q86TY3 774 aa7.55□□□□□ -1.2
LRRC49-222ENST00000560158 GALR2O43603 387 aaPredicted RBP7.55□□□□□ -1.2
LRRC49-222ENST00000560158 NUBP1P53384 320 aa7.55□□□□□ -1.2
LRRC49-222ENST00000560158 HOMEZQ8IX15 550 aa7.55□□□□□ -1.2
LRRC49-222ENST00000560158 PELP1Q8IZL8 1130 aaKnown RBP7.54□□□□□ -1.2
LRRC49-222ENST00000560158 TRIM41Q8WV44 630 aa7.54□□□□□ -1.2
LRRC49-222ENST00000560158 BRPF1P55201 1214 aaPredicted RBP7.53□□□□□ -1.2
LRRC49-222ENST00000560158 RIOK3O14730 519 aaKnown RBP7.52□□□□□ -1.21
LRRC49-222ENST00000560158 CADPS2Q86UW7 1296 aa7.51□□□□□ -1.21
LRRC49-222ENST00000560158 KCNV2Q8TDN2 545 aa7.51□□□□□ -1.21
LRRC49-222ENST00000560158 METRNQ9UJH8 293 aa7.51□□□□□ -1.21
LRRC49-222ENST00000560158 STK25O00506 426 aa7.49□□□□□ -1.21
LRRC49-222ENST00000560158 ERICH6Q7L0X2 663 aa7.49□□□□□ -1.21
LRRC49-222ENST00000560158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
LRRC49-222ENST00000560158 LMOD2Q6P5Q4 547 aa7.49□□□□□ -1.21
LRRC49-222ENST00000560158 ZBTB47Q9UFB7 747 aaPredicted RBP7.47□□□□□ -1.21
LRRC49-222ENST00000560158 C7P10643 843 aa7.46□□□□□ -1.22
LRRC49-222ENST00000560158 SUPT5HO00267 1087 aaKnown RBP7.45□□□□□ -1.22
LRRC49-222ENST00000560158 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.45□□□□□ -1.22
LRRC49-222ENST00000560158 GSE1Q14687 1217 aa7.45□□□□□ -1.22
LRRC49-222ENST00000560158 ZFP91Q96JP5 570 aaPredicted RBP7.45□□□□□ -1.22
LRRC49-222ENST00000560158 SLC39A7Q92504 469 aa7.44□□□□□ -1.22
LRRC49-222ENST00000560158 BCL11BQ9C0K0 894 aaPredicted RBP7.44□□□□□ -1.22
LRRC49-222ENST00000560158 VGFO15240 615 aaPredicted RBP7.43□□□□□ -1.22
LRRC49-222ENST00000560158 MNX1P50219 401 aaPredicted RBP7.43□□□□□ -1.22
LRRC49-222ENST00000560158 FARP1Q9Y4F1 1045 aaPredicted RBP7.43□□□□□ -1.22
LRRC49-222ENST00000560158 ST18O60284 1047 aa7.41□□□□□ -1.22
LRRC49-222ENST00000560158 STK24Q9Y6E0 443 aa7.41□□□□□ -1.22
LRRC49-222ENST00000560158 SGIP1Q9BQI5 828 aa7.4□□□□□ -1.23
LRRC49-222ENST00000560158 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
LRRC49-222ENST00000560158 ZRANB1Q9UGI0 708 aa7.39□□□□□ -1.23
LRRC49-222ENST00000560158 PLEKHG5O94827 1062 aa7.38□□□□□ -1.23
LRRC49-222ENST00000560158 DCAF8Q5TAQ9 597 aa7.38□□□□□ -1.23
LRRC49-222ENST00000560158 RASEFQ8IZ41 740 aa7.38□□□□□ -1.23
LRRC49-222ENST00000560158 ZC3H15Q8WU90 426 aaKnown RBP7.38□□□□□ -1.23
LRRC49-222ENST00000560158 SLC24A3Q9HC58 644 aa7.36□□□□□ -1.23
LRRC49-222ENST00000560158 CHRM1P11229 460 aaPredicted RBP7.35□□□□□ -1.23
LRRC49-222ENST00000560158 UBTFP17480 764 aaKnown RBP7.34□□□□□ -1.23
LRRC49-222ENST00000560158 CREBZFQ9NS37 354 aa7.34□□□□□ -1.23
LRRC49-222ENST00000560158 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
LRRC49-222ENST00000560158 ASTLQ6HA08 431 aaPredicted RBP7.34□□□□□ -1.23
LRRC49-222ENST00000560158 PRR29P0C7W0 189 aa7.33□□□□□ -1.24
LRRC49-222ENST00000560158 PYGBP11216 843 aa7.32□□□□□ -1.24
LRRC49-222ENST00000560158 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
LRRC49-222ENST00000560158 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
LRRC49-222ENST00000560158 SEMA3EO15041 775 aa7.3□□□□□ -1.24
LRRC49-222ENST00000560158 TESPA1A2RU30 521 aaPredicted RBP7.28□□□□□ -1.24
LRRC49-222ENST00000560158 ATMINO43313 823 aaPredicted RBP7.27□□□□□ -1.25
LRRC49-222ENST00000560158 MFRPQ9BY79 579 aa7.27□□□□□ -1.25
LRRC49-222ENST00000560158 RYDENQ9NUL5 291 aaKnown RBP7.27□□□□□ -1.25
LRRC49-222ENST00000560158 PPP1R37O75864 691 aa7.26□□□□□ -1.25
LRRC49-222ENST00000560158 ZMYND10O75800 440 aa7.26□□□□□ -1.25
LRRC49-222ENST00000560158 TMEM121BQ9BXQ6 578 aaPredicted RBP7.25□□□□□ -1.25
LRRC49-222ENST00000560158 TRIM26Q12899 539 aaPredicted RBP7.24□□□□□ -1.25
LRRC49-222ENST00000560158 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
LRRC49-222ENST00000560158 ARHGEF1Q92888 912 aaKnown RBP7.24□□□□□ -1.25
LRRC49-222ENST00000560158 C1orf115Q9H7X2 142 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms