RNA–Protein interactions for RNA: ENST00000559847.6

RFX7-202, Transcript of regulatory factor X7, humanhuman

TSL 1 (best)

Gene RFX7, Length 4,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7-202ENST00000559847 RSPH4AQ5TD94 716 aa6.25□□□□□ -1.41
RFX7-202ENST00000559847 DNAJC5BQ9UF47 199 aa6.24□□□□□ -1.41
RFX7-202ENST00000559847 DNAJC5Q9H3Z4 198 aa6.23□□□□□ -1.41
RFX7-202ENST00000559847 RSPH6AQ9H0K4 717 aa6.22□□□□□ -1.41
RFX7-202ENST00000559847 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.22□□□□□ -1.41
RFX7-202ENST00000559847 SHROOM4Q9ULL8 1493 aa6.22□□□□□ -1.41
RFX7-202ENST00000559847 AAMPQ13685 434 aa6.22□□□□□ -1.41
RFX7-202ENST00000559847 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.41
RFX7-202ENST00000559847 CDK11AQ9UQ88 783 aaPredicted RBP6.21□□□□□ -1.41
RFX7-202ENST00000559847 CCDC9Q9Y3X0 531 aaKnown RBP6.21□□□□□ -1.42
RFX7-202ENST00000559847 SALL2Q9Y467 1007 aaPredicted RBP6.2□□□□□ -1.42
RFX7-202ENST00000559847 PPARGC1BQ86YN6 1023 aaKnown RBP6.19□□□□□ -1.42
RFX7-202ENST00000559847 TRIM41Q8WV44 630 aa6.18□□□□□ -1.42
RFX7-202ENST00000559847 ARID3CA6NKF2 412 aa6.18□□□□□ -1.42
RFX7-202ENST00000559847 SPRYD3Q8NCJ5 442 aa6.15□□□□□ -1.42
RFX7-202ENST00000559847 NEUROD1Q13562 356 aa6.14□□□□□ -1.43
RFX7-202ENST00000559847 RNF216Q9NWF9 866 aaPredicted RBP6.14□□□□□ -1.43
RFX7-202ENST00000559847 RB1CC1Q8TDY2 1594 aa6.14□□□□□ -1.43
RFX7-202ENST00000559847 DMRT2Q9Y5R5 561 aa6.14□□□□□ -1.43
RFX7-202ENST00000559847 SLC4A2P04920 1241 aa6.12□□□□□ -1.43
RFX7-202ENST00000559847 HSP90B1P14625 803 aaKnown RBP6.12□□□□□ -1.43
RFX7-202ENST00000559847 BCCIPQ9P287 314 aaKnown RBP eCLIP6.11□□□□□ -1.43
RFX7-202ENST00000559847 VASPP50552 380 aaPredicted RBP6.1□□□□□ -1.43
RFX7-202ENST00000559847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFX7-202ENST00000559847 ZBTB7CA1YPR0 619 aa6.1□□□□□ -1.43
RFX7-202ENST00000559847 RGL2O15211 777 aa6.1□□□□□ -1.43
RFX7-202ENST00000559847 ZMYND15Q9H091 742 aa6.1□□□□□ -1.43
RFX7-202ENST00000559847 FOXD4L5Q5VV16 416 aaPredicted RBP6.09□□□□□ -1.43
RFX7-202ENST00000559847 FOXD4L4Q8WXT5 416 aaPredicted RBP6.09□□□□□ -1.43
RFX7-202ENST00000559847 RGS22Q8NE09 1264 aa6.09□□□□□ -1.44
RFX7-202ENST00000559847 RBM10P98175 930 aaKnown RBP6.08□□□□□ -1.44
RFX7-202ENST00000559847 MYT1LQ9UL68 1186 aa6.08□□□□□ -1.44
RFX7-202ENST00000559847 MTMR7Q9Y216 660 aa6.08□□□□□ -1.44
RFX7-202ENST00000559847 PUS7Q96PZ0 661 aaKnown RBP6.08□□□□□ -1.44
RFX7-202ENST00000559847 ZNF326Q5BKZ1 582 aaKnown RBP6.07□□□□□ -1.44
RFX7-202ENST00000559847 KCTD17Q8N5Z5 321 aa6.06□□□□□ -1.44
RFX7-202ENST00000559847 RAD21O60216 631 aa6.05□□□□□ -1.44
RFX7-202ENST00000559847 NEUROD2Q15784 382 aa6.05□□□□□ -1.44
RFX7-202ENST00000559847 CCDC136Q96JN2 1154 aa6.05□□□□□ -1.44
RFX7-202ENST00000559847 CHRM1P11229 460 aaPredicted RBP6.05□□□□□ -1.44
RFX7-202ENST00000559847 CLSPNQ9HAW4 1339 aa6.05□□□□□ -1.44
RFX7-202ENST00000559847 ERCC6Q03468 1493 aa6.05□□□□□ -1.44
RFX7-202ENST00000559847 IRX6P78412 446 aaPredicted RBP6.04□□□□□ -1.44
RFX7-202ENST00000559847 ATF5Q9Y2D1 282 aaPredicted RBP6.04□□□□□ -1.44
RFX7-202ENST00000559847 ZNF692Q9BU19 519 aaPredicted RBP6.04□□□□□ -1.44
RFX7-202ENST00000559847 HOXD11P31277 338 aaPredicted RBP6.03□□□□□ -1.44
RFX7-202ENST00000559847 CECR2Q9BXF3 1484 aa6.03□□□□□ -1.44
RFX7-202ENST00000559847 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
RFX7-202ENST00000559847 RBM25P49756 843 aaKnown RBP6.02□□□□□ -1.45
RFX7-202ENST00000559847 APBB1O00213 710 aa6.02□□□□□ -1.45
RFX7-202ENST00000559847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.02□□□□□ -1.452e-8■■■□□ 14.9
RFX7-202ENST00000559847 ECM2O94769 699 aaPredicted RBP6.01□□□□□ -1.45
RFX7-202ENST00000559847 POLR3GLQ9BT43 218 aa6.01□□□□□ -1.45
RFX7-202ENST00000559847 DCAF1Q9Y4B6 1507 aa6.01□□□□□ -1.45
RFX7-202ENST00000559847 BRPF3Q9ULD4 1205 aa5.99□□□□□ -1.45
RFX7-202ENST00000559847 A0A0U1RQG5 324 aaPredicted RBP5.98□□□□□ -1.45
RFX7-202ENST00000559847 LMOD2Q6P5Q4 547 aa5.98□□□□□ -1.45
RFX7-202ENST00000559847 HMGB1P09429 215 aaKnown RBP5.98□□□□□ -1.45
RFX7-202ENST00000559847 SLC24A3Q9HC58 644 aa5.98□□□□□ -1.45
RFX7-202ENST00000559847 ATXN8OSP0DMR3 200 aa5.98□□□□□ -1.45
RFX7-202ENST00000559847 SCRIBQ14160 1630 aa5.98□□□□□ -1.45
RFX7-202ENST00000559847 NACADO15069 1562 aa5.98□□□□□ -1.45
RFX7-202ENST00000559847 CHGAP10645 457 aaKnown RBP5.97□□□□□ -1.45
RFX7-202ENST00000559847 NAP1L5Q96NT1 182 aaPredicted RBP5.97□□□□□ -1.45
RFX7-202ENST00000559847 DEKP35659 375 aaKnown RBP5.96□□□□□ -1.45
RFX7-202ENST00000559847 MYO15BQ96JP2 1530 aa5.95□□□□□ -1.46
RFX7-202ENST00000559847 TMED8Q6PL24 325 aaPredicted RBP5.95□□□□□ -1.46
RFX7-202ENST00000559847 FAM177A1Q8N128 213 aaPredicted RBP5.95□□□□□ -1.46
RFX7-202ENST00000559847 TEX2Q8IWB9 1127 aa5.94□□□□□ -1.46
RFX7-202ENST00000559847 CCDC82Q8N4S0 544 aa5.94□□□□□ -1.46
RFX7-202ENST00000559847 TICAM2Q86XR7 235 aa5.94□□□□□ -1.46
RFX7-202ENST00000559847 AEBP1Q8IUX7 1158 aa5.94□□□□□ -1.46
RFX7-202ENST00000559847 ZFP91Q96JP5 570 aaPredicted RBP5.94□□□□□ -1.46
RFX7-202ENST00000559847 GLIPR1L2Q4G1C9 344 aa5.93□□□□□ -1.46
RFX7-202ENST00000559847 IPO4Q8TEX9 1081 aaKnown RBP5.93□□□□□ -1.46
RFX7-202ENST00000559847 CWC22Q9HCG8 908 aaKnown RBP5.93□□□□□ -1.46
RFX7-202ENST00000559847 MKRN3Q13064 507 aaKnown RBP5.92□□□□□ -1.46
RFX7-202ENST00000559847 GPBP1L1Q9HC44 474 aaPredicted RBP5.92□□□□□ -1.46
RFX7-202ENST00000559847 USP35Q9P2H5 1018 aa5.92□□□□□ -1.46
RFX7-202ENST00000559847 NAP1L2Q9ULW6 460 aaPredicted RBP5.92□□□□□ -1.46
RFX7-202ENST00000559847 NKX1-1Q15270 411 aaPredicted RBP5.91□□□□□ -1.46
RFX7-202ENST00000559847 MYCNP04198 464 aaPredicted RBP5.91□□□□□ -1.46
RFX7-202ENST00000559847 ZC3H15Q8WU90 426 aaKnown RBP5.9□□□□□ -1.46
RFX7-202ENST00000559847 MFAP1P55081 439 aaKnown RBP5.89□□□□□ -1.47
RFX7-202ENST00000559847 IL27Q8NEV9 243 aa5.88□□□□□ -1.47
RFX7-202ENST00000559847 ZNF592Q92610 1267 aa5.88□□□□□ -1.47
RFX7-202ENST00000559847 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.88□□□□□ -1.47
RFX7-202ENST00000559847 U3KPZ7 1027 aaPredicted RBP5.88□□□□□ -1.47
RFX7-202ENST00000559847 CERS3Q8IU89 383 aa5.88□□□□□ -1.47
RFX7-202ENST00000559847 PROM2Q8N271 834 aa5.87□□□□□ -1.47
RFX7-202ENST00000559847 GRIPAP1Q4V328 841 aa5.86□□□□□ -1.47
RFX7-202ENST00000559847 GZF1Q9H116 711 aaPredicted RBP5.86□□□□□ -1.47
RFX7-202ENST00000559847 GTF2E1P29083 439 aaPredicted RBP5.85□□□□□ -1.47
RFX7-202ENST00000559847 SECISBP2LQ93073 1101 aaKnown RBP5.85□□□□□ -1.47
RFX7-202ENST00000559847 KCNV2Q8TDN2 545 aa5.85□□□□□ -1.47
RFX7-202ENST00000559847 TMCO4Q5TGY1 634 aa5.84□□□□□ -1.47
RFX7-202ENST00000559847 SPDYE4A6NLX3 237 aa5.84□□□□□ -1.47
RFX7-202ENST00000559847 CLSTN1O94985 981 aa5.84□□□□□ -1.47
RFX7-202ENST00000559847 ZCCHC6Q5VYS8 1495 aaKnown RBP5.84□□□□□ -1.48
RFX7-202ENST00000559847 IRF5Q13568 498 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms