RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
COPS2-204ENST00000558545 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
COPS2-204ENST00000558545 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
COPS2-204ENST00000558545 SPOCK2Q92563 424 aa14.95□□□□□ -0.02
COPS2-204ENST00000558545 KIF12Q96FN5 646 aa14.88□□□□□ -0.03
COPS2-204ENST00000558545 GSE1Q14687 1217 aa14.86□□□□□ -0.03
COPS2-204ENST00000558545 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
COPS2-204ENST00000558545 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
COPS2-204ENST00000558545 MS4A3Q96HJ5 214 aa14.81□□□□□ -0.04
COPS2-204ENST00000558545 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
COPS2-204ENST00000558545 MAP3K13O43283 966 aa14.79□□□□□ -0.04
COPS2-204ENST00000558545 CHRM1P11229 460 aaPredicted RBP14.73□□□□□ -0.05
COPS2-204ENST00000558545 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
COPS2-204ENST00000558545 PYGBP11216 843 aa14.72□□□□□ -0.05
COPS2-204ENST00000558545 DCBLD2Q96PD2 775 aa14.72□□□□□ -0.05
COPS2-204ENST00000558545 PCDHB13Q9Y5F0 798 aa14.71□□□□□ -0.05
COPS2-204ENST00000558545 CIZ1Q9ULV3 898 aaPredicted RBP14.7□□□□□ -0.06
COPS2-204ENST00000558545 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
COPS2-204ENST00000558545 IFNL1Q8IU54 200 aa14.66□□□□□ -0.06
COPS2-204ENST00000558545 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
COPS2-204ENST00000558545 TIE1P35590 1138 aa14.62□□□□□ -0.07
COPS2-204ENST00000558545 TRPC6Q9Y210 931 aa14.61□□□□□ -0.07
COPS2-204ENST00000558545 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
COPS2-204ENST00000558545 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
COPS2-204ENST00000558545 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
COPS2-204ENST00000558545 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
COPS2-204ENST00000558545 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
COPS2-204ENST00000558545 ATN1P54259 1190 aaPredicted RBP14.52□□□□□ -0.09
COPS2-204ENST00000558545 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
COPS2-204ENST00000558545 TMEM106CQ9BVX2 250 aa14.47□□□□□ -0.09
COPS2-204ENST00000558545 PKD2Q13563 968 aa14.46□□□□□ -0.09
COPS2-204ENST00000558545 SLC39A7Q92504 469 aa14.45□□□□□ -0.1
COPS2-204ENST00000558545 C7P10643 843 aa14.43□□□□□ -0.1
COPS2-204ENST00000558545 PDAP1Q13442 181 aaKnown RBP14.42□□□□□ -0.1
COPS2-204ENST00000558545 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
COPS2-204ENST00000558545 PSEN1P49768 467 aa14.41□□□□□ -0.1
COPS2-204ENST00000558545 RNF25Q96BH1 459 aaPredicted RBP14.41□□□□□ -0.1
COPS2-204ENST00000558545 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
COPS2-204ENST00000558545 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
COPS2-204ENST00000558545 METRNQ9UJH8 293 aa14.39□□□□□ -0.11
COPS2-204ENST00000558545 IER5LQ5T953 404 aa14.38□□□□□ -0.11
COPS2-204ENST00000558545 LHX8Q68G74 356 aa14.34□□□□□ -0.11
COPS2-204ENST00000558545 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
COPS2-204ENST00000558545 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
COPS2-204ENST00000558545 POTEFA5A3E0 1075 aa14.27□□□□□ -0.13
COPS2-204ENST00000558545 RGL2O15211 777 aa14.27□□□□□ -0.13
COPS2-204ENST00000558545 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
COPS2-204ENST00000558545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.24□□□□□ -0.13
COPS2-204ENST00000558545 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
COPS2-204ENST00000558545 GOLGA2Q08379 1002 aa14.24□□□□□ -0.13
COPS2-204ENST00000558545 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
COPS2-204ENST00000558545 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
COPS2-204ENST00000558545 SEC24BO95487 1268 aa14.22□□□□□ -0.13
COPS2-204ENST00000558545 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
COPS2-204ENST00000558545 CABP2Q9NPB3 220 aa14.2□□□□□ -0.14
COPS2-204ENST00000558545 OCEL1Q9H607 264 aa14.19□□□□□ -0.14
COPS2-204ENST00000558545 ILDR1Q86SU0 546 aaPredicted RBP14.18□□□□□ -0.14
COPS2-204ENST00000558545 PLCG2P16885 1265 aa14.17□□□□□ -0.14
COPS2-204ENST00000558545 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
COPS2-204ENST00000558545 PDCD7Q8N8D1 485 aaKnown RBP14.12□□□□□ -0.15
COPS2-204ENST00000558545 BCL11BQ9C0K0 894 aaPredicted RBP14.12□□□□□ -0.15
COPS2-204ENST00000558545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.158e-8■■□□□ 12.4
COPS2-204ENST00000558545 STK25O00506 426 aa14.1□□□□□ -0.15
COPS2-204ENST00000558545 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
COPS2-204ENST00000558545 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
COPS2-204ENST00000558545 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
COPS2-204ENST00000558545 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
COPS2-204ENST00000558545 STK24Q9Y6E0 443 aa14.08□□□□□ -0.16
COPS2-204ENST00000558545 SOX12O15370 315 aa14.07□□□□□ -0.16
COPS2-204ENST00000558545 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
COPS2-204ENST00000558545 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
COPS2-204ENST00000558545 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
COPS2-204ENST00000558545 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
COPS2-204ENST00000558545 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
COPS2-204ENST00000558545 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
COPS2-204ENST00000558545 NLRP6P59044 892 aa13.95□□□□□ -0.18
COPS2-204ENST00000558545 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
COPS2-204ENST00000558545 FBXO22Q8NEZ5 403 aa13.94□□□□□ -0.18
COPS2-204ENST00000558545 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
COPS2-204ENST00000558545 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
COPS2-204ENST00000558545 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
COPS2-204ENST00000558545 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
COPS2-204ENST00000558545 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
COPS2-204ENST00000558545 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
COPS2-204ENST00000558545 G3V3G9 751 aa13.84□□□□□ -0.19
COPS2-204ENST00000558545 C3orf67Q6ZVT6 689 aa13.84□□□□□ -0.19
COPS2-204ENST00000558545 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
COPS2-204ENST00000558545 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
COPS2-204ENST00000558545 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
COPS2-204ENST00000558545 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
COPS2-204ENST00000558545 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
COPS2-204ENST00000558545 PPP1R37O75864 691 aa13.69□□□□□ -0.22
COPS2-204ENST00000558545 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
COPS2-204ENST00000558545 GTPBP6O43824 516 aaPredicted RBP13.65□□□□□ -0.22
COPS2-204ENST00000558545 TMEM92Q6UXU6 159 aa13.65□□□□□ -0.22
COPS2-204ENST00000558545 SNPHO15079 494 aa13.64□□□□□ -0.23
COPS2-204ENST00000558545 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
COPS2-204ENST00000558545 LCE2DQ5TA82 110 aaPredicted RBP13.6□□□□□ -0.23
COPS2-204ENST00000558545 KIF3CO14782 793 aa13.58□□□□□ -0.24
COPS2-204ENST00000558545 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms