RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
CRNDE-204ENST00000558031 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
CRNDE-204ENST00000558031 SPOCK2Q92563 424 aa11.14□□□□□ -0.63
CRNDE-204ENST00000558031 CLCN6P51797 869 aa11.13□□□□□ -0.63
CRNDE-204ENST00000558031 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
CRNDE-204ENST00000558031 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
CRNDE-204ENST00000558031 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
CRNDE-204ENST00000558031 GSE1Q14687 1217 aa11.05□□□□□ -0.64
CRNDE-204ENST00000558031 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
CRNDE-204ENST00000558031 MAP3K13O43283 966 aa11.02□□□□□ -0.65
CRNDE-204ENST00000558031 CIZ1Q9ULV3 898 aaPredicted RBP11.01□□□□□ -0.65
CRNDE-204ENST00000558031 PYGBP11216 843 aa11□□□□□ -0.65
CRNDE-204ENST00000558031 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
CRNDE-204ENST00000558031 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
CRNDE-204ENST00000558031 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
CRNDE-204ENST00000558031 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
CRNDE-204ENST00000558031 IFNL1Q8IU54 200 aa10.91□□□□□ -0.66
CRNDE-204ENST00000558031 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
CRNDE-204ENST00000558031 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
CRNDE-204ENST00000558031 PCDHB8Q9UN66 801 aa10.87□□□□□ -0.67
CRNDE-204ENST00000558031 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
CRNDE-204ENST00000558031 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
CRNDE-204ENST00000558031 ASTLQ6HA08 431 aaPredicted RBP10.85□□□□□ -0.67
CRNDE-204ENST00000558031 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
CRNDE-204ENST00000558031 TIE1P35590 1138 aa10.84□□□□□ -0.67
CRNDE-204ENST00000558031 ZNF467Q7Z7K2 595 aaPredicted RBP10.84□□□□□ -0.67
CRNDE-204ENST00000558031 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
CRNDE-204ENST00000558031 ATN1P54259 1190 aaPredicted RBP10.81□□□□□ -0.68
CRNDE-204ENST00000558031 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
CRNDE-204ENST00000558031 TMEM106CQ9BVX2 250 aa10.79□□□□□ -0.68
CRNDE-204ENST00000558031 PKD2Q13563 968 aa10.77□□□□□ -0.69
CRNDE-204ENST00000558031 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
CRNDE-204ENST00000558031 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
CRNDE-204ENST00000558031 PSEN1P49768 467 aa10.73□□□□□ -0.69
CRNDE-204ENST00000558031 SLC39A7Q92504 469 aa10.73□□□□□ -0.69
CRNDE-204ENST00000558031 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
CRNDE-204ENST00000558031 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
CRNDE-204ENST00000558031 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
CRNDE-204ENST00000558031 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
CRNDE-204ENST00000558031 C7P10643 843 aa10.7□□□□□ -0.7
CRNDE-204ENST00000558031 RGL2O15211 777 aa10.66□□□□□ -0.7
CRNDE-204ENST00000558031 LHX8Q68G74 356 aa10.66□□□□□ -0.7
CRNDE-204ENST00000558031 VGFO15240 615 aaPredicted RBP10.65□□□□□ -0.7
CRNDE-204ENST00000558031 IER5LQ5T953 404 aa10.64□□□□□ -0.71
CRNDE-204ENST00000558031 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
CRNDE-204ENST00000558031 SEC24BO95487 1268 aa10.62□□□□□ -0.71
CRNDE-204ENST00000558031 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
CRNDE-204ENST00000558031 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
CRNDE-204ENST00000558031 POTEFA5A3E0 1075 aa10.61□□□□□ -0.71
CRNDE-204ENST00000558031 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
CRNDE-204ENST00000558031 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
CRNDE-204ENST00000558031 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
CRNDE-204ENST00000558031 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
CRNDE-204ENST00000558031 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
CRNDE-204ENST00000558031 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
CRNDE-204ENST00000558031 PLCG2P16885 1265 aa10.57□□□□□ -0.72
CRNDE-204ENST00000558031 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
CRNDE-204ENST00000558031 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
CRNDE-204ENST00000558031 EFCAB3Q8N7B9 438 aa10.53□□□□□ -0.72
CRNDE-204ENST00000558031 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
CRNDE-204ENST00000558031 STK25O00506 426 aa10.52□□□□□ -0.73
CRNDE-204ENST00000558031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.73
CRNDE-204ENST00000558031 POTEJP0CG39 1038 aa10.51□□□□□ -0.73
CRNDE-204ENST00000558031 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
CRNDE-204ENST00000558031 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
CRNDE-204ENST00000558031 ILDR1Q86SU0 546 aaPredicted RBP10.47□□□□□ -0.73
CRNDE-204ENST00000558031 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
CRNDE-204ENST00000558031 SOX12O15370 315 aa10.45□□□□□ -0.74
CRNDE-204ENST00000558031 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
CRNDE-204ENST00000558031 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
CRNDE-204ENST00000558031 SCUBE2Q9NQ36 999 aa10.43□□□□□ -0.74
CRNDE-204ENST00000558031 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
CRNDE-204ENST00000558031 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
CRNDE-204ENST00000558031 PHF8Q9UPP1 1060 aa10.42□□□□□ -0.74
CRNDE-204ENST00000558031 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
CRNDE-204ENST00000558031 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
CRNDE-204ENST00000558031 L3MBTL3Q96JM7 780 aaPredicted RBP10.4□□□□□ -0.74
CRNDE-204ENST00000558031 NLRP6P59044 892 aa10.37□□□□□ -0.75
CRNDE-204ENST00000558031 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
CRNDE-204ENST00000558031 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
CRNDE-204ENST00000558031 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
CRNDE-204ENST00000558031 G3V3G9 751 aa10.34□□□□□ -0.75
CRNDE-204ENST00000558031 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
CRNDE-204ENST00000558031 C3orf67Q6ZVT6 689 aa10.32□□□□□ -0.76
CRNDE-204ENST00000558031 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.32□□□□□ -0.76
CRNDE-204ENST00000558031 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
CRNDE-204ENST00000558031 DNAJC5Q9H3Z4 198 aa10.29□□□□□ -0.76
CRNDE-204ENST00000558031 NKX1-1Q15270 411 aaPredicted RBP10.28□□□□□ -0.76
CRNDE-204ENST00000558031 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
CRNDE-204ENST00000558031 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
CRNDE-204ENST00000558031 PPP1R37O75864 691 aa10.22□□□□□ -0.77
CRNDE-204ENST00000558031 RYDENQ9NUL5 291 aaKnown RBP10.19□□□□□ -0.78
CRNDE-204ENST00000558031 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
CRNDE-204ENST00000558031 GTPBP6O43824 516 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-204ENST00000558031 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
CRNDE-204ENST00000558031 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.78
CRNDE-204ENST00000558031 SNPHO15079 494 aa10.12□□□□□ -0.79
CRNDE-204ENST00000558031 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
CRNDE-204ENST00000558031 ST18O60284 1047 aa10.07□□□□□ -0.8
CRNDE-204ENST00000558031 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms