RNA–Protein interactions for RNA: ENST00000558008.3

PCLAF-203, Transcript of PCNA clamp associated factor, humanhuman

TSL 3 BASIC

Gene PCLAF, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLAF-203ENST00000558008 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
PCLAF-203ENST00000558008 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
PCLAF-203ENST00000558008 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
PCLAF-203ENST00000558008 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
PCLAF-203ENST00000558008 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
PCLAF-203ENST00000558008 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
PCLAF-203ENST00000558008 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
PCLAF-203ENST00000558008 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
PCLAF-203ENST00000558008 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
PCLAF-203ENST00000558008 MAP3K13O43283 966 aa13.53□□□□□ -0.24
PCLAF-203ENST00000558008 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
PCLAF-203ENST00000558008 GSE1Q14687 1217 aa13.49□□□□□ -0.25
PCLAF-203ENST00000558008 PYGBP11216 843 aa13.47□□□□□ -0.25
PCLAF-203ENST00000558008 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
PCLAF-203ENST00000558008 CIZ1Q9ULV3 898 aaPredicted RBP13.45□□□□□ -0.26
PCLAF-203ENST00000558008 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
PCLAF-203ENST00000558008 TRPC6Q9Y210 931 aa13.41□□□□□ -0.26
PCLAF-203ENST00000558008 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
PCLAF-203ENST00000558008 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
PCLAF-203ENST00000558008 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
PCLAF-203ENST00000558008 TIE1P35590 1138 aa13.34□□□□□ -0.27
PCLAF-203ENST00000558008 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
PCLAF-203ENST00000558008 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
PCLAF-203ENST00000558008 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
PCLAF-203ENST00000558008 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
PCLAF-203ENST00000558008 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
PCLAF-203ENST00000558008 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
PCLAF-203ENST00000558008 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
PCLAF-203ENST00000558008 LHX8Q68G74 356 aa13.26□□□□□ -0.29
PCLAF-203ENST00000558008 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
PCLAF-203ENST00000558008 TMEM106CQ9BVX2 250 aa13.25□□□□□ -0.29
PCLAF-203ENST00000558008 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
PCLAF-203ENST00000558008 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
PCLAF-203ENST00000558008 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
PCLAF-203ENST00000558008 C7P10643 843 aa13.21□□□□□ -0.29
PCLAF-203ENST00000558008 PSEN1P49768 467 aa13.14□□□□□ -0.31
PCLAF-203ENST00000558008 PDAP1Q13442 181 aaKnown RBP13.12□□□□□ -0.31
PCLAF-203ENST00000558008 SEC24BO95487 1268 aa13.11□□□□□ -0.31
PCLAF-203ENST00000558008 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
PCLAF-203ENST00000558008 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
PCLAF-203ENST00000558008 IER5LQ5T953 404 aa13.09□□□□□ -0.31
PCLAF-203ENST00000558008 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
PCLAF-203ENST00000558008 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
PCLAF-203ENST00000558008 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
PCLAF-203ENST00000558008 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
PCLAF-203ENST00000558008 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
PCLAF-203ENST00000558008 PLCG2P16885 1265 aa13.02□□□□□ -0.33
PCLAF-203ENST00000558008 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
PCLAF-203ENST00000558008 PKD2Q13563 968 aa13.02□□□□□ -0.33
PCLAF-203ENST00000558008 CABP2Q9NPB3 220 aa13□□□□□ -0.33
PCLAF-203ENST00000558008 IRX5P78411 483 aaPredicted RBP12.99□□□□□ -0.33
PCLAF-203ENST00000558008 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
PCLAF-203ENST00000558008 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
PCLAF-203ENST00000558008 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
PCLAF-203ENST00000558008 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
PCLAF-203ENST00000558008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
PCLAF-203ENST00000558008 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
PCLAF-203ENST00000558008 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
PCLAF-203ENST00000558008 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
PCLAF-203ENST00000558008 RGL2O15211 777 aa12.92□□□□□ -0.34
PCLAF-203ENST00000558008 SCUBE2Q9NQ36 999 aa12.92□□□□□ -0.34
PCLAF-203ENST00000558008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.34
PCLAF-203ENST00000558008 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
PCLAF-203ENST00000558008 PDCD7Q8N8D1 485 aaKnown RBP12.86□□□□□ -0.35
PCLAF-203ENST00000558008 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
PCLAF-203ENST00000558008 STK25O00506 426 aa12.84□□□□□ -0.35
PCLAF-203ENST00000558008 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
PCLAF-203ENST00000558008 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
PCLAF-203ENST00000558008 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
PCLAF-203ENST00000558008 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
PCLAF-203ENST00000558008 G3V3G9 751 aa12.75□□□□□ -0.37
PCLAF-203ENST00000558008 SOX12O15370 315 aa12.75□□□□□ -0.37
PCLAF-203ENST00000558008 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
PCLAF-203ENST00000558008 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
PCLAF-203ENST00000558008 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
PCLAF-203ENST00000558008 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
PCLAF-203ENST00000558008 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
PCLAF-203ENST00000558008 NLRP6P59044 892 aa12.67□□□□□ -0.38
PCLAF-203ENST00000558008 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
PCLAF-203ENST00000558008 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
PCLAF-203ENST00000558008 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
PCLAF-203ENST00000558008 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
PCLAF-203ENST00000558008 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
PCLAF-203ENST00000558008 FBXO22Q8NEZ5 403 aa12.62□□□□□ -0.39
PCLAF-203ENST00000558008 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
PCLAF-203ENST00000558008 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
PCLAF-203ENST00000558008 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
PCLAF-203ENST00000558008 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
PCLAF-203ENST00000558008 SNPHO15079 494 aa12.51□□□□□ -0.41
PCLAF-203ENST00000558008 LCE2DQ5TA82 110 aaPredicted RBP12.49□□□□□ -0.41
PCLAF-203ENST00000558008 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
PCLAF-203ENST00000558008 POTEMA6NI47 508 aa12.47□□□□□ -0.41
PCLAF-203ENST00000558008 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
PCLAF-203ENST00000558008 ST18O60284 1047 aa12.45□□□□□ -0.42
PCLAF-203ENST00000558008 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
PCLAF-203ENST00000558008 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
PCLAF-203ENST00000558008 PPP1R37O75864 691 aa12.44□□□□□ -0.42
PCLAF-203ENST00000558008 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
PCLAF-203ENST00000558008 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
PCLAF-203ENST00000558008 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms