RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
PSMA3-212ENST00000557290 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
PSMA3-212ENST00000557290 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
PSMA3-212ENST00000557290 GSE1Q14687 1217 aa12.08□□□□□ -0.48
PSMA3-212ENST00000557290 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
PSMA3-212ENST00000557290 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
PSMA3-212ENST00000557290 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
PSMA3-212ENST00000557290 CLCN6P51797 869 aa12.05□□□□□ -0.48
PSMA3-212ENST00000557290 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
PSMA3-212ENST00000557290 RGL2O15211 777 aa12□□□□□ -0.49
PSMA3-212ENST00000557290 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
PSMA3-212ENST00000557290 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
PSMA3-212ENST00000557290 PYGBP11216 843 aa11.97□□□□□ -0.49
PSMA3-212ENST00000557290 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
PSMA3-212ENST00000557290 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
PSMA3-212ENST00000557290 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
PSMA3-212ENST00000557290 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
PSMA3-212ENST00000557290 GALR2O43603 387 aaPredicted RBP11.91□□□□□ -0.5
PSMA3-212ENST00000557290 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
PSMA3-212ENST00000557290 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
PSMA3-212ENST00000557290 RIOK3O14730 519 aaKnown RBP11.84□□□□□ -0.51
PSMA3-212ENST00000557290 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
PSMA3-212ENST00000557290 MAP3K13O43283 966 aa11.79□□□□□ -0.52
PSMA3-212ENST00000557290 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
PSMA3-212ENST00000557290 PCDHB13Q9Y5F0 798 aa11.79□□□□□ -0.52
PSMA3-212ENST00000557290 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
PSMA3-212ENST00000557290 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
PSMA3-212ENST00000557290 LHX8Q68G74 356 aa11.77□□□□□ -0.53
PSMA3-212ENST00000557290 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
PSMA3-212ENST00000557290 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
PSMA3-212ENST00000557290 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
PSMA3-212ENST00000557290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
PSMA3-212ENST00000557290 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
PSMA3-212ENST00000557290 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
PSMA3-212ENST00000557290 STK25O00506 426 aa11.7□□□□□ -0.54
PSMA3-212ENST00000557290 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
PSMA3-212ENST00000557290 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
PSMA3-212ENST00000557290 SGIP1Q9BQI5 828 aa11.69□□□□□ -0.54
PSMA3-212ENST00000557290 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
PSMA3-212ENST00000557290 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
PSMA3-212ENST00000557290 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
PSMA3-212ENST00000557290 PSEN1P49768 467 aa11.66□□□□□ -0.54
PSMA3-212ENST00000557290 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
PSMA3-212ENST00000557290 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
PSMA3-212ENST00000557290 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
PSMA3-212ENST00000557290 TRPC6Q9Y210 931 aa11.64□□□□□ -0.55
PSMA3-212ENST00000557290 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
PSMA3-212ENST00000557290 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
PSMA3-212ENST00000557290 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
PSMA3-212ENST00000557290 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
PSMA3-212ENST00000557290 BMP2KQ9NSY1 1161 aaPredicted RBP11.58□□□□□ -0.56
PSMA3-212ENST00000557290 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
PSMA3-212ENST00000557290 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
PSMA3-212ENST00000557290 TIE1P35590 1138 aa11.56□□□□□ -0.56
PSMA3-212ENST00000557290 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
PSMA3-212ENST00000557290 C7P10643 843 aa11.55□□□□□ -0.56
PSMA3-212ENST00000557290 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
PSMA3-212ENST00000557290 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
PSMA3-212ENST00000557290 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
PSMA3-212ENST00000557290 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
PSMA3-212ENST00000557290 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
PSMA3-212ENST00000557290 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
PSMA3-212ENST00000557290 TTLL13PA6NNM8 815 aa11.51□□□□□ -0.57
PSMA3-212ENST00000557290 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
PSMA3-212ENST00000557290 EFCAB3Q8N7B9 438 aa11.48□□□□□ -0.57
PSMA3-212ENST00000557290 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
PSMA3-212ENST00000557290 POTEFA5A3E0 1075 aa11.46□□□□□ -0.57
PSMA3-212ENST00000557290 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
PSMA3-212ENST00000557290 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
PSMA3-212ENST00000557290 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
PSMA3-212ENST00000557290 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
PSMA3-212ENST00000557290 MFRPQ9BY79 579 aa11.43□□□□□ -0.58
PSMA3-212ENST00000557290 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
PSMA3-212ENST00000557290 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
PSMA3-212ENST00000557290 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
PSMA3-212ENST00000557290 IER5LQ5T953 404 aa11.38□□□□□ -0.59
PSMA3-212ENST00000557290 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
PSMA3-212ENST00000557290 SOX12O15370 315 aa11.37□□□□□ -0.59
PSMA3-212ENST00000557290 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
PSMA3-212ENST00000557290 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
PSMA3-212ENST00000557290 NLRP6P59044 892 aa11.35□□□□□ -0.59
PSMA3-212ENST00000557290 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
PSMA3-212ENST00000557290 SEC24BO95487 1268 aa11.32□□□□□ -0.6
PSMA3-212ENST00000557290 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
PSMA3-212ENST00000557290 PPP1R37O75864 691 aa11.31□□□□□ -0.6
PSMA3-212ENST00000557290 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
PSMA3-212ENST00000557290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.63e-6■■□□□ 13.8
PSMA3-212ENST00000557290 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
PSMA3-212ENST00000557290 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
PSMA3-212ENST00000557290 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
PSMA3-212ENST00000557290 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
PSMA3-212ENST00000557290 PLCG2P16885 1265 aa11.23□□□□□ -0.61
PSMA3-212ENST00000557290 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
PSMA3-212ENST00000557290 KDM2AQ9Y2K7 1162 aa11.23□□□□□ -0.61
PSMA3-212ENST00000557290 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
PSMA3-212ENST00000557290 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
PSMA3-212ENST00000557290 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
PSMA3-212ENST00000557290 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
PSMA3-212ENST00000557290 LCE2DQ5TA82 110 aaPredicted RBP11.1□□□□□ -0.63
PSMA3-212ENST00000557290 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms