RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 NUBP1P53384 320 aa13.55□□□□□ -0.24
KTN1-225ENST00000557267 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
KTN1-225ENST00000557267 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
KTN1-225ENST00000557267 KIF12Q96FN5 646 aa13.49□□□□□ -0.25
KTN1-225ENST00000557267 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
KTN1-225ENST00000557267 MAP3K13O43283 966 aa13.41□□□□□ -0.26
KTN1-225ENST00000557267 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
KTN1-225ENST00000557267 LHX8Q68G74 356 aa13.39□□□□□ -0.27
KTN1-225ENST00000557267 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
KTN1-225ENST00000557267 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
KTN1-225ENST00000557267 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
KTN1-225ENST00000557267 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
KTN1-225ENST00000557267 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
KTN1-225ENST00000557267 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
KTN1-225ENST00000557267 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
KTN1-225ENST00000557267 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
KTN1-225ENST00000557267 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
KTN1-225ENST00000557267 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
KTN1-225ENST00000557267 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
KTN1-225ENST00000557267 TIE1P35590 1138 aa13.25□□□□□ -0.29
KTN1-225ENST00000557267 GSE1Q14687 1217 aa13.24□□□□□ -0.29
KTN1-225ENST00000557267 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
KTN1-225ENST00000557267 PYGBP11216 843 aa13.23□□□□□ -0.29
KTN1-225ENST00000557267 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
KTN1-225ENST00000557267 C7P10643 843 aa13.21□□□□□ -0.29
KTN1-225ENST00000557267 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
KTN1-225ENST00000557267 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
KTN1-225ENST00000557267 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
KTN1-225ENST00000557267 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
KTN1-225ENST00000557267 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
KTN1-225ENST00000557267 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
KTN1-225ENST00000557267 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
KTN1-225ENST00000557267 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
KTN1-225ENST00000557267 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
KTN1-225ENST00000557267 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
KTN1-225ENST00000557267 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
KTN1-225ENST00000557267 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
KTN1-225ENST00000557267 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
KTN1-225ENST00000557267 IER5LQ5T953 404 aa13.04□□□□□ -0.32
KTN1-225ENST00000557267 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
KTN1-225ENST00000557267 SEC24BO95487 1268 aa12.99□□□□□ -0.33
KTN1-225ENST00000557267 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
KTN1-225ENST00000557267 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
KTN1-225ENST00000557267 PSEN1P49768 467 aa12.93□□□□□ -0.34
KTN1-225ENST00000557267 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
KTN1-225ENST00000557267 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
KTN1-225ENST00000557267 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
KTN1-225ENST00000557267 PLCG2P16885 1265 aa12.87□□□□□ -0.35
KTN1-225ENST00000557267 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
KTN1-225ENST00000557267 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
KTN1-225ENST00000557267 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
KTN1-225ENST00000557267 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
KTN1-225ENST00000557267 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
KTN1-225ENST00000557267 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
KTN1-225ENST00000557267 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
KTN1-225ENST00000557267 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
KTN1-225ENST00000557267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.375e-10■■■■□ 19.6
KTN1-225ENST00000557267 PKD2Q13563 968 aa12.7□□□□□ -0.38
KTN1-225ENST00000557267 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
KTN1-225ENST00000557267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
KTN1-225ENST00000557267 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
KTN1-225ENST00000557267 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
KTN1-225ENST00000557267 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
KTN1-225ENST00000557267 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
KTN1-225ENST00000557267 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
KTN1-225ENST00000557267 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
KTN1-225ENST00000557267 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
KTN1-225ENST00000557267 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.62□□□□□ -0.39
KTN1-225ENST00000557267 LCE2DQ5TA82 110 aaPredicted RBP12.61□□□□□ -0.39
KTN1-225ENST00000557267 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
KTN1-225ENST00000557267 SOX12O15370 315 aa12.58□□□□□ -0.4
KTN1-225ENST00000557267 POTEMA6NI47 508 aa12.57□□□□□ -0.4
KTN1-225ENST00000557267 RGL2O15211 777 aa12.57□□□□□ -0.4
KTN1-225ENST00000557267 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
KTN1-225ENST00000557267 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
KTN1-225ENST00000557267 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
KTN1-225ENST00000557267 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
KTN1-225ENST00000557267 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
KTN1-225ENST00000557267 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
KTN1-225ENST00000557267 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
KTN1-225ENST00000557267 STK25O00506 426 aa12.49□□□□□ -0.41
KTN1-225ENST00000557267 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
KTN1-225ENST00000557267 G3V3G9 751 aa12.48□□□□□ -0.41
KTN1-225ENST00000557267 ST18O60284 1047 aa12.47□□□□□ -0.41
KTN1-225ENST00000557267 SNPHO15079 494 aa12.46□□□□□ -0.41
KTN1-225ENST00000557267 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
KTN1-225ENST00000557267 NLRP6P59044 892 aa12.43□□□□□ -0.42
KTN1-225ENST00000557267 MFRPQ9BY79 579 aa12.42□□□□□ -0.42
KTN1-225ENST00000557267 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
KTN1-225ENST00000557267 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
KTN1-225ENST00000557267 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
KTN1-225ENST00000557267 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
KTN1-225ENST00000557267 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
KTN1-225ENST00000557267 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
KTN1-225ENST00000557267 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
KTN1-225ENST00000557267 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
KTN1-225ENST00000557267 PPP1R37O75864 691 aa12.23□□□□□ -0.45
KTN1-225ENST00000557267 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
KTN1-225ENST00000557267 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
KTN1-225ENST00000557267 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms