RNA–Protein interactions for RNA: ENST00000557085.1

PSMC6-213, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-213ENST00000557085 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
PSMC6-213ENST00000557085 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSMC6-213ENST00000557085 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
PSMC6-213ENST00000557085 BCANQ96GW7 911 aa11.89□□□□□ -0.51
PSMC6-213ENST00000557085 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
PSMC6-213ENST00000557085 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
PSMC6-213ENST00000557085 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
PSMC6-213ENST00000557085 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
PSMC6-213ENST00000557085 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
PSMC6-213ENST00000557085 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
PSMC6-213ENST00000557085 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
PSMC6-213ENST00000557085 MIER1Q8N108 512 aa11.76□□□□□ -0.53
PSMC6-213ENST00000557085 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
PSMC6-213ENST00000557085 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
PSMC6-213ENST00000557085 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
PSMC6-213ENST00000557085 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
PSMC6-213ENST00000557085 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
PSMC6-213ENST00000557085 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
PSMC6-213ENST00000557085 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
PSMC6-213ENST00000557085 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
PSMC6-213ENST00000557085 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
PSMC6-213ENST00000557085 TSPYL2Q9H2G4 693 aaPredicted RBP11.68□□□□□ -0.54
PSMC6-213ENST00000557085 POTEMA6NI47 508 aa11.67□□□□□ -0.54
PSMC6-213ENST00000557085 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
PSMC6-213ENST00000557085 C7P10643 843 aa11.67□□□□□ -0.54
PSMC6-213ENST00000557085 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
PSMC6-213ENST00000557085 PRKCSHP14314 528 aaPredicted RBP11.66□□□□□ -0.54
PSMC6-213ENST00000557085 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
PSMC6-213ENST00000557085 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
PSMC6-213ENST00000557085 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
PSMC6-213ENST00000557085 POTEGQ6S5H5 508 aa11.63□□□□□ -0.55
PSMC6-213ENST00000557085 KDM2AQ9Y2K7 1162 aa11.63□□□□□ -0.55
PSMC6-213ENST00000557085 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
PSMC6-213ENST00000557085 PAXIP1Q6ZW49 1069 aaPredicted RBP11.6□□□□□ -0.55
PSMC6-213ENST00000557085 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
PSMC6-213ENST00000557085 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
PSMC6-213ENST00000557085 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
PSMC6-213ENST00000557085 RGL2O15211 777 aa11.55□□□□□ -0.56
PSMC6-213ENST00000557085 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
PSMC6-213ENST00000557085 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
PSMC6-213ENST00000557085 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
PSMC6-213ENST00000557085 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
PSMC6-213ENST00000557085 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
PSMC6-213ENST00000557085 MAP3K13O43283 966 aa11.5□□□□□ -0.57
PSMC6-213ENST00000557085 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
PSMC6-213ENST00000557085 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
PSMC6-213ENST00000557085 POTEFA5A3E0 1075 aa11.48□□□□□ -0.57
PSMC6-213ENST00000557085 PCDH10Q9P2E7 1040 aa11.48□□□□□ -0.57
PSMC6-213ENST00000557085 FAM163AQ96GL9 167 aaPredicted RBP11.47□□□□□ -0.57
PSMC6-213ENST00000557085 TIE1P35590 1138 aa11.46□□□□□ -0.57
PSMC6-213ENST00000557085 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
PSMC6-213ENST00000557085 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
PSMC6-213ENST00000557085 NUBP1P53384 320 aa11.42□□□□□ -0.58
PSMC6-213ENST00000557085 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
PSMC6-213ENST00000557085 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
PSMC6-213ENST00000557085 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
PSMC6-213ENST00000557085 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
PSMC6-213ENST00000557085 SEC24BO95487 1268 aa11.39□□□□□ -0.59
PSMC6-213ENST00000557085 CHGAP10645 457 aaKnown RBP11.39□□□□□ -0.59
PSMC6-213ENST00000557085 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
PSMC6-213ENST00000557085 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
PSMC6-213ENST00000557085 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
PSMC6-213ENST00000557085 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
PSMC6-213ENST00000557085 PCDHB13Q9Y5F0 798 aa11.34□□□□□ -0.59
PSMC6-213ENST00000557085 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
PSMC6-213ENST00000557085 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
PSMC6-213ENST00000557085 GSE1Q14687 1217 aa11.31□□□□□ -0.6
PSMC6-213ENST00000557085 IER5LQ5T953 404 aa11.31□□□□□ -0.6
PSMC6-213ENST00000557085 NBR1Q14596 966 aa11.28□□□□□ -0.6
PSMC6-213ENST00000557085 IFNL1Q8IU54 200 aa11.27□□□□□ -0.61
PSMC6-213ENST00000557085 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
PSMC6-213ENST00000557085 RNF25Q96BH1 459 aaPredicted RBP11.22□□□□□ -0.61
PSMC6-213ENST00000557085 PYGBP11216 843 aa11.21□□□□□ -0.61
PSMC6-213ENST00000557085 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
PSMC6-213ENST00000557085 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
PSMC6-213ENST00000557085 PLCG2P16885 1265 aa11.18□□□□□ -0.62
PSMC6-213ENST00000557085 ST18O60284 1047 aa11.16□□□□□ -0.62
PSMC6-213ENST00000557085 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
PSMC6-213ENST00000557085 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
PSMC6-213ENST00000557085 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
PSMC6-213ENST00000557085 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
PSMC6-213ENST00000557085 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
PSMC6-213ENST00000557085 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
PSMC6-213ENST00000557085 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
PSMC6-213ENST00000557085 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
PSMC6-213ENST00000557085 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
PSMC6-213ENST00000557085 STK25O00506 426 aa11.02□□□□□ -0.65
PSMC6-213ENST00000557085 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
PSMC6-213ENST00000557085 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
PSMC6-213ENST00000557085 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
PSMC6-213ENST00000557085 SNPHO15079 494 aa10.99□□□□□ -0.65
PSMC6-213ENST00000557085 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.65
PSMC6-213ENST00000557085 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
PSMC6-213ENST00000557085 PSEN1P49768 467 aa10.95□□□□□ -0.66
PSMC6-213ENST00000557085 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
PSMC6-213ENST00000557085 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
PSMC6-213ENST00000557085 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
PSMC6-213ENST00000557085 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
PSMC6-213ENST00000557085 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
PSMC6-213ENST00000557085 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms