RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 DCAF1Q9Y4B6 1507 aa8.49□□□□□ -1.05
PCNX1-214ENST00000556849 HOMEZQ8IX15 550 aa8.49□□□□□ -1.05
PCNX1-214ENST00000556849 HS6ST3Q8IZP7 471 aa8.49□□□□□ -1.05
PCNX1-214ENST00000556849 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
PCNX1-214ENST00000556849 TRHP20396 242 aaPredicted RBP8.46□□□□□ -1.06
PCNX1-214ENST00000556849 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
PCNX1-214ENST00000556849 MIER1Q8N108 512 aa8.44□□□□□ -1.06
PCNX1-214ENST00000556849 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
PCNX1-214ENST00000556849 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
PCNX1-214ENST00000556849 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
PCNX1-214ENST00000556849 CHRDL2Q6WN34 429 aa8.41□□□□□ -1.06
PCNX1-214ENST00000556849 C14orf37Q86TY3 774 aa8.4□□□□□ -1.06
PCNX1-214ENST00000556849 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
PCNX1-214ENST00000556849 CCDC180Q9P1Z9 1646 aa8.38□□□□□ -1.07
PCNX1-214ENST00000556849 MYO15BQ96JP2 1530 aa8.35□□□□□ -1.07
PCNX1-214ENST00000556849 SPDYE2BA6NHP3 402 aa8.34□□□□□ -1.07
PCNX1-214ENST00000556849 SPDYE6P0CI01 402 aa8.34□□□□□ -1.07
PCNX1-214ENST00000556849 SPDYE2Q495Y8 402 aa8.34□□□□□ -1.07
PCNX1-214ENST00000556849 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
PCNX1-214ENST00000556849 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
PCNX1-214ENST00000556849 GSE1Q14687 1217 aa8.33□□□□□ -1.08
PCNX1-214ENST00000556849 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
PCNX1-214ENST00000556849 GTPBP6O43824 516 aaPredicted RBP8.32□□□□□ -1.08
PCNX1-214ENST00000556849 P3H3Q8IVL6 736 aa8.32□□□□□ -1.08
PCNX1-214ENST00000556849 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
PCNX1-214ENST00000556849 ABCB7O75027 752 aa8.31□□□□□ -1.08
PCNX1-214ENST00000556849 NKX1-1Q15270 411 aaPredicted RBP8.29□□□□□ -1.08
PCNX1-214ENST00000556849 PABPN1Q86U42 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
PCNX1-214ENST00000556849 RIOK3O14730 519 aaKnown RBP8.27□□□□□ -1.09
PCNX1-214ENST00000556849 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
PCNX1-214ENST00000556849 RBM42Q9BTD8 480 aaKnown RBP8.25□□□□□ -1.09
PCNX1-214ENST00000556849 VGFO15240 615 aaPredicted RBP8.22□□□□□ -1.09
PCNX1-214ENST00000556849 CENPBP07199 599 aaPredicted RBP8.22□□□□□ -1.09
PCNX1-214ENST00000556849 STK25O00506 426 aa8.2□□□□□ -1.1
PCNX1-214ENST00000556849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.2□□□□□ -1.1
PCNX1-214ENST00000556849 SGIP1Q9BQI5 828 aa8.2□□□□□ -1.1
PCNX1-214ENST00000556849 LMOD2Q6P5Q4 547 aa8.19□□□□□ -1.1
PCNX1-214ENST00000556849 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
PCNX1-214ENST00000556849 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-214ENST00000556849 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
PCNX1-214ENST00000556849 WDR70Q9NW82 654 aa8.15□□□□□ -1.1
PCNX1-214ENST00000556849 CHRM1P11229 460 aaPredicted RBP8.14□□□□□ -1.11
PCNX1-214ENST00000556849 NUBP1P53384 320 aa8.14□□□□□ -1.11
PCNX1-214ENST00000556849 DCAF8Q5TAQ9 597 aa8.14□□□□□ -1.11
PCNX1-214ENST00000556849 PLSCR2Q9NRY7 297 aa8.14□□□□□ -1.11
PCNX1-214ENST00000556849 SUPT5HO00267 1087 aaKnown RBP8.11□□□□□ -1.11
PCNX1-214ENST00000556849 FAM212AQ96EL1 285 aa8.11□□□□□ -1.11
PCNX1-214ENST00000556849 KCNV2Q8TDN2 545 aa8.1□□□□□ -1.11
PCNX1-214ENST00000556849 STK24Q9Y6E0 443 aa8.1□□□□□ -1.11
PCNX1-214ENST00000556849 HAX1O00165 279 aa8.09□□□□□ -1.11
PCNX1-214ENST00000556849 RANGAP1P46060 587 aaPredicted RBP8.09□□□□□ -1.11
PCNX1-214ENST00000556849 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
PCNX1-214ENST00000556849 BCL11AQ9H165 835 aa8.09□□□□□ -1.11
PCNX1-214ENST00000556849 CLSPNQ9HAW4 1339 aa8.07□□□□□ -1.12
PCNX1-214ENST00000556849 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
PCNX1-214ENST00000556849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.06□□□□□ -1.12
PCNX1-214ENST00000556849 ZFP91Q96JP5 570 aaPredicted RBP8.06□□□□□ -1.12
PCNX1-214ENST00000556849 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
PCNX1-214ENST00000556849 PIP4P2Q8N4L2 257 aa8.05□□□□□ -1.12
PCNX1-214ENST00000556849 ZC3H15Q8WU90 426 aaKnown RBP8.05□□□□□ -1.12
PCNX1-214ENST00000556849 ARHGEF1Q92888 912 aaKnown RBP8.04□□□□□ -1.12
PCNX1-214ENST00000556849 ANP32EQ9BTT0 268 aa8.02□□□□□ -1.13
PCNX1-214ENST00000556849 EVX2Q03828 476 aa7.99□□□□□ -1.13
PCNX1-214ENST00000556849 DIEXFQ68CQ4 756 aaKnown RBP7.98□□□□□ -1.13
PCNX1-214ENST00000556849 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
PCNX1-214ENST00000556849 LHX8Q68G74 356 aa7.97□□□□□ -1.13
PCNX1-214ENST00000556849 CADPS2Q86UW7 1296 aa7.97□□□□□ -1.13
PCNX1-214ENST00000556849 FAM9AQ8IZU1 332 aaPredicted RBP7.97□□□□□ -1.13
PCNX1-214ENST00000556849 SHROOM4Q9ULL8 1493 aa7.97□□□□□ -1.13
PCNX1-214ENST00000556849 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.14
PCNX1-214ENST00000556849 ZMYND10O75800 440 aa7.95□□□□□ -1.14
PCNX1-214ENST00000556849 SMYD5Q6GMV2 418 aa7.95□□□□□ -1.14
PCNX1-214ENST00000556849 ZCCHC6Q5VYS8 1495 aaKnown RBP7.94□□□□□ -1.14
PCNX1-214ENST00000556849 ZMYND15Q9H091 742 aa7.94□□□□□ -1.14
PCNX1-214ENST00000556849 LOC105371045A0A1W2PR82 267 aa7.93□□□□□ -1.14
PCNX1-214ENST00000556849 E2F4Q16254 413 aa7.93□□□□□ -1.14
PCNX1-214ENST00000556849 RSPH6AQ9H0K4 717 aa7.93□□□□□ -1.14
PCNX1-214ENST00000556849 UBTFP17480 764 aaKnown RBP7.91□□□□□ -1.14
PCNX1-214ENST00000556849 MNX1P50219 401 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-214ENST00000556849 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-214ENST00000556849 PYGBP11216 843 aa7.9□□□□□ -1.14
PCNX1-214ENST00000556849 ZNF467Q7Z7K2 595 aaPredicted RBP7.9□□□□□ -1.14
PCNX1-214ENST00000556849 RASEFQ8IZ41 740 aa7.9□□□□□ -1.14
PCNX1-214ENST00000556849 AKT1S1Q96B36 256 aa7.9□□□□□ -1.14
PCNX1-214ENST00000556849 SEMA3EO15041 775 aa7.89□□□□□ -1.15
PCNX1-214ENST00000556849 CREBZFQ9NS37 354 aa7.89□□□□□ -1.15
PCNX1-214ENST00000556849 BARGINQ6ZT62 677 aa7.88□□□□□ -1.15
PCNX1-214ENST00000556849 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.155e-8■■■■□ 20.5
PCNX1-214ENST00000556849 REM2Q8IYK8 340 aaPredicted RBP7.86□□□□□ -1.15
PCNX1-214ENST00000556849 AK7Q96M32 723 aa7.86□□□□□ -1.15
PCNX1-214ENST00000556849 PRR29P0C7W0 189 aa7.85□□□□□ -1.15
PCNX1-214ENST00000556849 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
PCNX1-214ENST00000556849 ZNF316A6NFI3 1004 aaPredicted RBP7.84□□□□□ -1.15
PCNX1-214ENST00000556849 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
PCNX1-214ENST00000556849 MFRPQ9BY79 579 aa7.83□□□□□ -1.16
PCNX1-214ENST00000556849 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
PCNX1-214ENST00000556849 MYT1LQ9UL68 1186 aa7.81□□□□□ -1.16
PCNX1-214ENST00000556849 PITPNM1O00562 1244 aa7.8□□□□□ -1.16
PCNX1-214ENST00000556849 CCER1Q8TC90 406 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-214ENST00000556849 NLRP6P59044 892 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms