RNA–Protein interactions for RNA: ENST00000556787.5

PAPOLA-222, Transcript of poly(A) polymerase alpha, human

TSL 2

Gene PAPOLA, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-222	ENST00000556787	CD44	P16070	742 aa	Known RBP	13.52	□□□□□ -0.25
PAPOLA-222	ENST00000556787	TRIM41	Q8WV44	630 aa		13.51	□□□□□ -0.25
PAPOLA-222	ENST00000556787	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.49	□□□□□ -0.25
PAPOLA-222	ENST00000556787	RASEF	Q8IZ41	740 aa		13.47	□□□□□ -0.25
PAPOLA-222	ENST00000556787	RTN4	Q9NQC3	1192 aa	Known RBP	13.45	□□□□□ -0.26
PAPOLA-222	ENST00000556787	ECM2	O94769	699 aa	Predicted RBP	13.41	□□□□□ -0.26
PAPOLA-222	ENST00000556787	ZRANB1	Q9UGI0	708 aa		13.41	□□□□□ -0.26
PAPOLA-222	ENST00000556787	PKD2	Q13563	968 aa		13.34	□□□□□ -0.27
PAPOLA-222	ENST00000556787	CHRM1	P11229	460 aa	Predicted RBP	13.33	□□□□□ -0.28
PAPOLA-222	ENST00000556787	CLCN6	P51797	869 aa		13.33	□□□□□ -0.28
PAPOLA-222	ENST00000556787	TAOK2	Q9UL54	1235 aa		13.32	□□□□□ -0.28
PAPOLA-222	ENST00000556787	POTEI	P0CG38	1075 aa		13.31	□□□□□ -0.28
PAPOLA-222	ENST00000556787	ZNF579	Q8NAF0	562 aa	Known RBP	13.31	□□□□□ -0.28
PAPOLA-222	ENST00000556787	CCDC61	Q9Y6R9	512 aa		13.3	□□□□□ -0.28
PAPOLA-222	ENST00000556787	PYGB	P11216	843 aa		13.29	□□□□□ -0.28
PAPOLA-222	ENST00000556787	LHX8	Q68G74	356 aa		13.27	□□□□□ -0.29
PAPOLA-222	ENST00000556787	DCAF8L2	P0C7V8	631 aa		13.26	□□□□□ -0.29
PAPOLA-222	ENST00000556787	SGIP1	Q9BQI5	828 aa		13.24	□□□□□ -0.29
PAPOLA-222	ENST00000556787	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.23	□□□□□ -0.29
PAPOLA-222	ENST00000556787	PCDHB13	Q9Y5F0	798 aa		13.21	□□□□□ -0.29
PAPOLA-222	ENST00000556787	KIF12	Q96FN5	646 aa		13.19	□□□□□ -0.3
PAPOLA-222	ENST00000556787	DCBLD2	Q96PD2	775 aa		13.19	□□□□□ -0.3
PAPOLA-222	ENST00000556787	RIOK3	O14730	519 aa	Known RBP	13.18	□□□□□ -0.3
PAPOLA-222	ENST00000556787	PHF12	Q96QT6	1004 aa		13.18	□□□□□ -0.3
PAPOLA-222	ENST00000556787	MAP3K13	O43283	966 aa		13.16	□□□□□ -0.3
PAPOLA-222	ENST00000556787	GALR2	O43603	387 aa	Predicted RBP	13.16	□□□□□ -0.3
PAPOLA-222	ENST00000556787	RGL2	O15211	777 aa		13.14	□□□□□ -0.31
PAPOLA-222	ENST00000556787	VGF	O15240	615 aa	Predicted RBP	13.13	□□□□□ -0.31
PAPOLA-222	ENST00000556787	PDAP1	Q13442	181 aa	Known RBP	13.08	□□□□□ -0.32
PAPOLA-222	ENST00000556787	PCDHB8	Q9UN66	801 aa		13.08	□□□□□ -0.32
PAPOLA-222	ENST00000556787	IFNL1	Q8IU54	200 aa		13.06	□□□□□ -0.32
PAPOLA-222	ENST00000556787	RNF25	Q96BH1	459 aa	Predicted RBP	13.04	□□□□□ -0.32
PAPOLA-222	ENST00000556787	MS4A3	Q96HJ5	214 aa		13.04	□□□□□ -0.32
PAPOLA-222	ENST00000556787	PSEN1	P49768	467 aa		13.03	□□□□□ -0.32
PAPOLA-222	ENST00000556787	CHGA	P10645	457 aa	Known RBP	13.01	□□□□□ -0.33
PAPOLA-222	ENST00000556787	STK25	O00506	426 aa		13	□□□□□ -0.33
PAPOLA-222	ENST00000556787	GOLGA2	Q08379	1002 aa		12.98	□□□□□ -0.33
PAPOLA-222	ENST00000556787	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.97	□□□□□ -0.33
PAPOLA-222	ENST00000556787	TIE1	P35590	1138 aa		12.97	□□□□□ -0.33
PAPOLA-222	ENST00000556787	ZFP91	Q96JP5	570 aa	Predicted RBP	12.97	□□□□□ -0.33
PAPOLA-222	ENST00000556787	STK24	Q9Y6E0	443 aa		12.95	□□□□□ -0.34
PAPOLA-222	ENST00000556787	TMEM106C	Q9BVX2	250 aa		12.94	□□□□□ -0.34
PAPOLA-222	ENST00000556787	HS6ST3	Q8IZP7	471 aa		12.93	□□□□□ -0.34
PAPOLA-222	ENST00000556787	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.93	□□□□□ -0.34
PAPOLA-222	ENST00000556787	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.93	□□□□□ -0.34
PAPOLA-222	ENST00000556787	PELP1	Q8IZL8	1130 aa	Known RBP	12.91	□□□□□ -0.34
PAPOLA-222	ENST00000556787	ASTL	Q6HA08	431 aa	Predicted RBP	12.88	□□□□□ -0.35
PAPOLA-222	ENST00000556787	BBX	Q8WY36	941 aa	Predicted RBP	12.88	□□□□□ -0.35
PAPOLA-222	ENST00000556787	POTEB2	H3BUK9	544 aa		12.87	□□□□□ -0.35
PAPOLA-222	ENST00000556787	MKRN3	Q13064	507 aa	Known RBP	12.86	□□□□□ -0.35
PAPOLA-222	ENST00000556787	ATMIN	O43313	823 aa	Predicted RBP	12.85	□□□□□ -0.35
PAPOLA-222	ENST00000556787	CABP2	Q9NPB3	220 aa		12.85	□□□□□ -0.35
PAPOLA-222	ENST00000556787	RYDEN	Q9NUL5	291 aa	Known RBP	12.85	□□□□□ -0.35
PAPOLA-222	ENST00000556787	TTLL13P	A6NNM8	815 aa		12.84	□□□□□ -0.35
PAPOLA-222	ENST00000556787	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.84	□□□□□ -0.35
PAPOLA-222	ENST00000556787	TRPC6	Q9Y210	931 aa		12.84	□□□□□ -0.35
PAPOLA-222	ENST00000556787	OTUD5	Q96G74	571 aa		12.82	□□□□□ -0.36
PAPOLA-222	ENST00000556787	METRN	Q9UJH8	293 aa		12.8	□□□□□ -0.36
PAPOLA-222	ENST00000556787	TRIM35	Q9UPQ4	493 aa		12.8	□□□□□ -0.36
PAPOLA-222	ENST00000556787	SOX12	O15370	315 aa		12.79	□□□□□ -0.36
PAPOLA-222	ENST00000556787	DNAJC5	Q9H3Z4	198 aa		12.79	□□□□□ -0.36
PAPOLA-222	ENST00000556787	SLC39A7	Q92504	469 aa		12.78	□□□□□ -0.36
PAPOLA-222	ENST00000556787	C7	P10643	843 aa		12.76	□□□□□ -0.37
PAPOLA-222	ENST00000556787	ATN1	P54259	1190 aa	Predicted RBP	12.76	□□□□□ -0.37
PAPOLA-222	ENST00000556787	EFCAB3	Q8N7B9	438 aa		12.75	□□□□□ -0.37
PAPOLA-222	ENST00000556787	NLRP6	P59044	892 aa		12.74	□□□□□ -0.37
PAPOLA-222	ENST00000556787	IER5L	Q5T953	404 aa		12.74	□□□□□ -0.37
PAPOLA-222	ENST00000556787	SPRYD3	Q8NCJ5	442 aa		12.74	□□□□□ -0.37
PAPOLA-222	ENST00000556787	SEC24B	O95487	1268 aa		12.7	□□□□□ -0.38
PAPOLA-222	ENST00000556787	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.7	□□□□□ -0.38	8e-7	■■■□□ 16.2
PAPOLA-222	ENST00000556787	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.69	□□□□□ -0.38
PAPOLA-222	ENST00000556787	CFAP44	Q96MT7	982 aa		12.69	□□□□□ -0.38
PAPOLA-222	ENST00000556787	POTEJ	P0CG39	1038 aa		12.68	□□□□□ -0.38
PAPOLA-222	ENST00000556787	PLCG2	P16885	1265 aa		12.66	□□□□□ -0.38
PAPOLA-222	ENST00000556787	OCEL1	Q9H607	264 aa		12.66	□□□□□ -0.38
PAPOLA-222	ENST00000556787		G3V3G9	751 aa		12.64	□□□□□ -0.39
PAPOLA-222	ENST00000556787	PHF8	Q9UPP1	1060 aa		12.63	□□□□□ -0.39
PAPOLA-222	ENST00000556787	NKX1-1	Q15270	411 aa	Predicted RBP	12.62	□□□□□ -0.39
PAPOLA-222	ENST00000556787	POTEF	A5A3E0	1075 aa		12.61	□□□□□ -0.39
PAPOLA-222	ENST00000556787	PLCB2	Q00722	1185 aa		12.61	□□□□□ -0.39
PAPOLA-222	ENST00000556787	MFRP	Q9BY79	579 aa		12.61	□□□□□ -0.39
PAPOLA-222	ENST00000556787	MAMSTR	Q6ZN01	415 aa		12.59	□□□□□ -0.39
PAPOLA-222	ENST00000556787	GTPBP6	O43824	516 aa	Predicted RBP	12.58	□□□□□ -0.4
PAPOLA-222	ENST00000556787	IRX5	P78411	483 aa	Predicted RBP	12.57	□□□□□ -0.4
PAPOLA-222	ENST00000556787	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.57	□□□□□ -0.4
PAPOLA-222	ENST00000556787	FBXO22	Q8NEZ5	403 aa		12.55	□□□□□ -0.4
PAPOLA-222	ENST00000556787	SCUBE2	Q9NQ36	999 aa		12.53	□□□□□ -0.4
PAPOLA-222	ENST00000556787	ILDR1	Q86SU0	546 aa	Predicted RBP	12.52	□□□□□ -0.41
PAPOLA-222	ENST00000556787	COLQ	Q9Y215	455 aa	Predicted RBP	12.52	□□□□□ -0.41
PAPOLA-222	ENST00000556787	POTEM	A6NI47	508 aa		12.49	□□□□□ -0.41
PAPOLA-222	ENST00000556787	HAP1	P54257	671 aa	Predicted RBP	12.49	□□□□□ -0.41
PAPOLA-222	ENST00000556787	PDCD7	Q8N8D1	485 aa	Known RBP	12.48	□□□□□ -0.41
PAPOLA-222	ENST00000556787	MS4A4A	Q96JQ5	239 aa		12.47	□□□□□ -0.41
PAPOLA-222	ENST00000556787	POTEG	Q6S5H5	508 aa		12.46	□□□□□ -0.41
PAPOLA-222	ENST00000556787	BOLA1	Q9Y3E2	137 aa		12.46	□□□□□ -0.41
PAPOLA-222	ENST00000556787	PLSCR2	Q9NRY7	297 aa		12.44	□□□□□ -0.42
PAPOLA-222	ENST00000556787	DPY19L2	Q6NUT2	758 aa		12.43	□□□□□ -0.42
PAPOLA-222	ENST00000556787	PPP1R37	O75864	691 aa		12.41	□□□□□ -0.42
PAPOLA-222	ENST00000556787	C3orf67	Q6ZVT6	689 aa		12.41	□□□□□ -0.42
PAPOLA-222	ENST00000556787	LCE2D	Q5TA82	110 aa	Predicted RBP	12.4	□□□□□ -0.42

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