RNA–Protein interactions for RNA: ENST00000556559.5

KLHDC2-209, Transcript of kelch domain containing 2, humanhuman

TSL 5

Gene KLHDC2, Length 751 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-209ENST00000556559 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
KLHDC2-209ENST00000556559 LHX8Q68G74 356 aa11.85□□□□□ -0.51
KLHDC2-209ENST00000556559 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
KLHDC2-209ENST00000556559 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
KLHDC2-209ENST00000556559 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
KLHDC2-209ENST00000556559 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
KLHDC2-209ENST00000556559 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
KLHDC2-209ENST00000556559 NUBP1P53384 320 aa11.72□□□□□ -0.53
KLHDC2-209ENST00000556559 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
KLHDC2-209ENST00000556559 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
KLHDC2-209ENST00000556559 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
KLHDC2-209ENST00000556559 MAP3K13O43283 966 aa11.66□□□□□ -0.54
KLHDC2-209ENST00000556559 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
KLHDC2-209ENST00000556559 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
KLHDC2-209ENST00000556559 C7P10643 843 aa11.63□□□□□ -0.55
KLHDC2-209ENST00000556559 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
KLHDC2-209ENST00000556559 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
KLHDC2-209ENST00000556559 TIE1P35590 1138 aa11.61□□□□□ -0.55
KLHDC2-209ENST00000556559 METRNQ9UJH8 293 aa11.58□□□□□ -0.56
KLHDC2-209ENST00000556559 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
KLHDC2-209ENST00000556559 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
KLHDC2-209ENST00000556559 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
KLHDC2-209ENST00000556559 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
KLHDC2-209ENST00000556559 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
KLHDC2-209ENST00000556559 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
KLHDC2-209ENST00000556559 TTLL13PA6NNM8 815 aa11.51□□□□□ -0.57
KLHDC2-209ENST00000556559 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
KLHDC2-209ENST00000556559 GSE1Q14687 1217 aa11.51□□□□□ -0.57
KLHDC2-209ENST00000556559 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
KLHDC2-209ENST00000556559 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
KLHDC2-209ENST00000556559 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
KLHDC2-209ENST00000556559 IER5LQ5T953 404 aa11.46□□□□□ -0.57
KLHDC2-209ENST00000556559 PYGBP11216 843 aa11.45□□□□□ -0.58
KLHDC2-209ENST00000556559 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
KLHDC2-209ENST00000556559 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
KLHDC2-209ENST00000556559 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
KLHDC2-209ENST00000556559 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
KLHDC2-209ENST00000556559 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
KLHDC2-209ENST00000556559 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
KLHDC2-209ENST00000556559 SEC24BO95487 1268 aa11.4□□□□□ -0.58
KLHDC2-209ENST00000556559 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
KLHDC2-209ENST00000556559 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
KLHDC2-209ENST00000556559 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
KLHDC2-209ENST00000556559 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
KLHDC2-209ENST00000556559 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
KLHDC2-209ENST00000556559 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
KLHDC2-209ENST00000556559 PLCG2P16885 1265 aa11.29□□□□□ -0.6
KLHDC2-209ENST00000556559 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
KLHDC2-209ENST00000556559 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
KLHDC2-209ENST00000556559 TRIM41Q8WV44 630 aa11.26□□□□□ -0.61
KLHDC2-209ENST00000556559 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
KLHDC2-209ENST00000556559 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
KLHDC2-209ENST00000556559 PSEN1P49768 467 aa11.22□□□□□ -0.61
KLHDC2-209ENST00000556559 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
KLHDC2-209ENST00000556559 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
KLHDC2-209ENST00000556559 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
KLHDC2-209ENST00000556559 BCANQ96GW7 911 aa11.2□□□□□ -0.62
KLHDC2-209ENST00000556559 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
KLHDC2-209ENST00000556559 POTEMA6NI47 508 aa11.13□□□□□ -0.63
KLHDC2-209ENST00000556559 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
KLHDC2-209ENST00000556559 PKD2Q13563 968 aa11.11□□□□□ -0.63
KLHDC2-209ENST00000556559 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
KLHDC2-209ENST00000556559 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
KLHDC2-209ENST00000556559 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
KLHDC2-209ENST00000556559 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
KLHDC2-209ENST00000556559 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
KLHDC2-209ENST00000556559 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
KLHDC2-209ENST00000556559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.633e-9■■■□□ 15.3
KLHDC2-209ENST00000556559 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
KLHDC2-209ENST00000556559 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
KLHDC2-209ENST00000556559 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
KLHDC2-209ENST00000556559 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
KLHDC2-209ENST00000556559 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
KLHDC2-209ENST00000556559 LCE2DQ5TA82 110 aaPredicted RBP11.04□□□□□ -0.64
KLHDC2-209ENST00000556559 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
KLHDC2-209ENST00000556559 C3orf67Q6ZVT6 689 aa11.03□□□□□ -0.64
KLHDC2-209ENST00000556559 SNPHO15079 494 aa11.02□□□□□ -0.65
KLHDC2-209ENST00000556559 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
KLHDC2-209ENST00000556559 G3V3G9 751 aa10.97□□□□□ -0.65
KLHDC2-209ENST00000556559 RNF25Q96BH1 459 aaPredicted RBP10.96□□□□□ -0.65
KLHDC2-209ENST00000556559 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
KLHDC2-209ENST00000556559 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
KLHDC2-209ENST00000556559 ST18O60284 1047 aa10.94□□□□□ -0.66
KLHDC2-209ENST00000556559 EFCAB3Q8N7B9 438 aa10.94□□□□□ -0.66
KLHDC2-209ENST00000556559 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
KLHDC2-209ENST00000556559 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
KLHDC2-209ENST00000556559 SOX12O15370 315 aa10.93□□□□□ -0.66
KLHDC2-209ENST00000556559 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
KLHDC2-209ENST00000556559 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
KLHDC2-209ENST00000556559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
KLHDC2-209ENST00000556559 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
KLHDC2-209ENST00000556559 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
KLHDC2-209ENST00000556559 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
KLHDC2-209ENST00000556559 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
KLHDC2-209ENST00000556559 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
KLHDC2-209ENST00000556559 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
KLHDC2-209ENST00000556559 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
KLHDC2-209ENST00000556559 NLRP6P59044 892 aa10.8□□□□□ -0.68
KLHDC2-209ENST00000556559 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
KLHDC2-209ENST00000556559 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms