RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
ATXN3-233ENST00000555816 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
ATXN3-233ENST00000555816 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
ATXN3-233ENST00000555816 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
ATXN3-233ENST00000555816 NUBP1P53384 320 aa13.53□□□□□ -0.24
ATXN3-233ENST00000555816 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
ATXN3-233ENST00000555816 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
ATXN3-233ENST00000555816 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
ATXN3-233ENST00000555816 MAP3K13O43283 966 aa13.44□□□□□ -0.26
ATXN3-233ENST00000555816 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
ATXN3-233ENST00000555816 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
ATXN3-233ENST00000555816 C7P10643 843 aa13.42□□□□□ -0.26
ATXN3-233ENST00000555816 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
ATXN3-233ENST00000555816 TIE1P35590 1138 aa13.4□□□□□ -0.26
ATXN3-233ENST00000555816 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
ATXN3-233ENST00000555816 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
ATXN3-233ENST00000555816 PCDHB13Q9Y5F0 798 aa13.36□□□□□ -0.27
ATXN3-233ENST00000555816 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
ATXN3-233ENST00000555816 ATN1P54259 1190 aaPredicted RBP13.33□□□□□ -0.28
ATXN3-233ENST00000555816 METRNQ9UJH8 293 aa13.33□□□□□ -0.28
ATXN3-233ENST00000555816 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
ATXN3-233ENST00000555816 GSE1Q14687 1217 aa13.31□□□□□ -0.28
ATXN3-233ENST00000555816 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
ATXN3-233ENST00000555816 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
ATXN3-233ENST00000555816 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
ATXN3-233ENST00000555816 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
ATXN3-233ENST00000555816 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
ATXN3-233ENST00000555816 IER5LQ5T953 404 aa13.23□□□□□ -0.29
ATXN3-233ENST00000555816 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
ATXN3-233ENST00000555816 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-233ENST00000555816 PYGBP11216 843 aa13.19□□□□□ -0.3
ATXN3-233ENST00000555816 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
ATXN3-233ENST00000555816 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-233ENST00000555816 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
ATXN3-233ENST00000555816 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
ATXN3-233ENST00000555816 SEC24BO95487 1268 aa13.15□□□□□ -0.3
ATXN3-233ENST00000555816 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
ATXN3-233ENST00000555816 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
ATXN3-233ENST00000555816 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
ATXN3-233ENST00000555816 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
ATXN3-233ENST00000555816 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
ATXN3-233ENST00000555816 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
ATXN3-233ENST00000555816 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
ATXN3-233ENST00000555816 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
ATXN3-233ENST00000555816 PLCG2P16885 1265 aa13.01□□□□□ -0.33
ATXN3-233ENST00000555816 IRX5P78411 483 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-233ENST00000555816 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
ATXN3-233ENST00000555816 PSEN1P49768 467 aa12.95□□□□□ -0.34
ATXN3-233ENST00000555816 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
ATXN3-233ENST00000555816 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
ATXN3-233ENST00000555816 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
ATXN3-233ENST00000555816 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
ATXN3-233ENST00000555816 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
ATXN3-233ENST00000555816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■■□□□ 13.5
ATXN3-233ENST00000555816 POTEMA6NI47 508 aa12.8□□□□□ -0.36
ATXN3-233ENST00000555816 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
ATXN3-233ENST00000555816 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
ATXN3-233ENST00000555816 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
ATXN3-233ENST00000555816 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
ATXN3-233ENST00000555816 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
ATXN3-233ENST00000555816 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
ATXN3-233ENST00000555816 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
ATXN3-233ENST00000555816 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
ATXN3-233ENST00000555816 SNPHO15079 494 aa12.73□□□□□ -0.37
ATXN3-233ENST00000555816 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
ATXN3-233ENST00000555816 LCE2DQ5TA82 110 aaPredicted RBP12.71□□□□□ -0.37
ATXN3-233ENST00000555816 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
ATXN3-233ENST00000555816 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
ATXN3-233ENST00000555816 G3V3G9 751 aa12.66□□□□□ -0.38
ATXN3-233ENST00000555816 SOX12O15370 315 aa12.65□□□□□ -0.38
ATXN3-233ENST00000555816 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-233ENST00000555816 EFCAB3Q8N7B9 438 aa12.62□□□□□ -0.39
ATXN3-233ENST00000555816 TMEM121BQ9BXQ6 578 aaPredicted RBP12.62□□□□□ -0.39
ATXN3-233ENST00000555816 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
ATXN3-233ENST00000555816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.6□□□□□ -0.39
ATXN3-233ENST00000555816 ST18O60284 1047 aa12.6□□□□□ -0.39
ATXN3-233ENST00000555816 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
ATXN3-233ENST00000555816 ZFP91Q96JP5 570 aaPredicted RBP12.6□□□□□ -0.39
ATXN3-233ENST00000555816 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
ATXN3-233ENST00000555816 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
ATXN3-233ENST00000555816 PKD2Q13563 968 aa12.49□□□□□ -0.41
ATXN3-233ENST00000555816 NLRP6P59044 892 aa12.48□□□□□ -0.41
ATXN3-233ENST00000555816 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
ATXN3-233ENST00000555816 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
ATXN3-233ENST00000555816 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
ATXN3-233ENST00000555816 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
ATXN3-233ENST00000555816 STK25O00506 426 aa12.43□□□□□ -0.42
ATXN3-233ENST00000555816 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
ATXN3-233ENST00000555816 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
ATXN3-233ENST00000555816 RGL2O15211 777 aa12.39□□□□□ -0.43
ATXN3-233ENST00000555816 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
ATXN3-233ENST00000555816 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
ATXN3-233ENST00000555816 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
ATXN3-233ENST00000555816 HOXB3P14651 431 aaPredicted RBP12.35□□□□□ -0.43
ATXN3-233ENST00000555816 EMP3P54852 163 aa12.35□□□□□ -0.43
ATXN3-233ENST00000555816 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
ATXN3-233ENST00000555816 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
ATXN3-233ENST00000555816 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
ATXN3-233ENST00000555816 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
ATXN3-233ENST00000555816 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms