RNA–Protein interactions for RNA: ENST00000555554.1

CASC1-209, Transcript of cancer susceptibility 1, humanhuman

TSL 3

Gene CASC1, Length 403 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-209ENST00000555554 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
CASC1-209ENST00000555554 LHX8Q68G74 356 aa12.41□□□□□ -0.42
CASC1-209ENST00000555554 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
CASC1-209ENST00000555554 NUBP1P53384 320 aa12.37□□□□□ -0.43
CASC1-209ENST00000555554 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
CASC1-209ENST00000555554 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
CASC1-209ENST00000555554 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
CASC1-209ENST00000555554 MAP3K13O43283 966 aa12.3□□□□□ -0.44
CASC1-209ENST00000555554 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
CASC1-209ENST00000555554 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
CASC1-209ENST00000555554 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
CASC1-209ENST00000555554 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
CASC1-209ENST00000555554 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
CASC1-209ENST00000555554 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
CASC1-209ENST00000555554 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
CASC1-209ENST00000555554 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
CASC1-209ENST00000555554 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
CASC1-209ENST00000555554 PCDHB13Q9Y5F0 798 aa12.2□□□□□ -0.46
CASC1-209ENST00000555554 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
CASC1-209ENST00000555554 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
CASC1-209ENST00000555554 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
CASC1-209ENST00000555554 TIE1P35590 1138 aa12.17□□□□□ -0.46
CASC1-209ENST00000555554 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
CASC1-209ENST00000555554 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
CASC1-209ENST00000555554 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
CASC1-209ENST00000555554 C7P10643 843 aa12.14□□□□□ -0.47
CASC1-209ENST00000555554 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
CASC1-209ENST00000555554 PYGBP11216 843 aa12.13□□□□□ -0.47
CASC1-209ENST00000555554 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
CASC1-209ENST00000555554 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
CASC1-209ENST00000555554 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
CASC1-209ENST00000555554 GSE1Q14687 1217 aa12.06□□□□□ -0.48
CASC1-209ENST00000555554 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
CASC1-209ENST00000555554 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
CASC1-209ENST00000555554 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
CASC1-209ENST00000555554 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CASC1-209ENST00000555554 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
CASC1-209ENST00000555554 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
CASC1-209ENST00000555554 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
CASC1-209ENST00000555554 SEC24BO95487 1268 aa11.96□□□□□ -0.49
CASC1-209ENST00000555554 IER5LQ5T953 404 aa11.96□□□□□ -0.49
CASC1-209ENST00000555554 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
CASC1-209ENST00000555554 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
CASC1-209ENST00000555554 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
CASC1-209ENST00000555554 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
CASC1-209ENST00000555554 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
CASC1-209ENST00000555554 PLCG2P16885 1265 aa11.86□□□□□ -0.51
CASC1-209ENST00000555554 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
CASC1-209ENST00000555554 PSEN1P49768 467 aa11.83□□□□□ -0.52
CASC1-209ENST00000555554 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
CASC1-209ENST00000555554 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
CASC1-209ENST00000555554 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
CASC1-209ENST00000555554 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
CASC1-209ENST00000555554 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
CASC1-209ENST00000555554 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
CASC1-209ENST00000555554 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
CASC1-209ENST00000555554 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
CASC1-209ENST00000555554 POTEMA6NI47 508 aa11.69□□□□□ -0.54
CASC1-209ENST00000555554 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
CASC1-209ENST00000555554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.54
CASC1-209ENST00000555554 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
CASC1-209ENST00000555554 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CASC1-209ENST00000555554 RNF25Q96BH1 459 aaPredicted RBP11.66□□□□□ -0.54
CASC1-209ENST00000555554 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
CASC1-209ENST00000555554 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
CASC1-209ENST00000555554 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
CASC1-209ENST00000555554 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
CASC1-209ENST00000555554 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
CASC1-209ENST00000555554 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
CASC1-209ENST00000555554 EFCAB3Q8N7B9 438 aa11.58□□□□□ -0.56
CASC1-209ENST00000555554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
CASC1-209ENST00000555554 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
CASC1-209ENST00000555554 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
CASC1-209ENST00000555554 ST18O60284 1047 aa11.51□□□□□ -0.57
CASC1-209ENST00000555554 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
CASC1-209ENST00000555554 BOLA1Q9Y3E2 137 aa11.51□□□□□ -0.57
CASC1-209ENST00000555554 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
CASC1-209ENST00000555554 G3V3G9 751 aa11.48□□□□□ -0.57
CASC1-209ENST00000555554 PKD2Q13563 968 aa11.48□□□□□ -0.57
CASC1-209ENST00000555554 SNPHO15079 494 aa11.45□□□□□ -0.58
CASC1-209ENST00000555554 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
CASC1-209ENST00000555554 SOX12O15370 315 aa11.44□□□□□ -0.58
CASC1-209ENST00000555554 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
CASC1-209ENST00000555554 RGL2O15211 777 aa11.43□□□□□ -0.58
CASC1-209ENST00000555554 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
CASC1-209ENST00000555554 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
CASC1-209ENST00000555554 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
CASC1-209ENST00000555554 TMEM121BQ9BXQ6 578 aaPredicted RBP11.42□□□□□ -0.58
CASC1-209ENST00000555554 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
CASC1-209ENST00000555554 STK25O00506 426 aa11.39□□□□□ -0.59
CASC1-209ENST00000555554 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
CASC1-209ENST00000555554 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
CASC1-209ENST00000555554 CDAN1Q8IWY9 1227 aa11.35□□□□□ -0.59
CASC1-209ENST00000555554 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
CASC1-209ENST00000555554 NLRP6P59044 892 aa11.34□□□□□ -0.59
CASC1-209ENST00000555554 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
CASC1-209ENST00000555554 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
CASC1-209ENST00000555554 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
CASC1-209ENST00000555554 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
CASC1-209ENST00000555554 EMP3P54852 163 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms