RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
FCF1-207ENST00000554973 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
FCF1-207ENST00000554973 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
FCF1-207ENST00000554973 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
FCF1-207ENST00000554973 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
FCF1-207ENST00000554973 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
FCF1-207ENST00000554973 ARXQ96QS3 562 aa11.85□□□□□ -0.51
FCF1-207ENST00000554973 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
FCF1-207ENST00000554973 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
FCF1-207ENST00000554973 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
FCF1-207ENST00000554973 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
FCF1-207ENST00000554973 NBR1Q14596 966 aa11.8□□□□□ -0.52
FCF1-207ENST00000554973 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
FCF1-207ENST00000554973 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
FCF1-207ENST00000554973 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
FCF1-207ENST00000554973 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
FCF1-207ENST00000554973 RGL2O15211 777 aa11.74□□□□□ -0.53
FCF1-207ENST00000554973 GABBR2O75899 941 aa11.72□□□□□ -0.53
FCF1-207ENST00000554973 CLCN6P51797 869 aa11.66□□□□□ -0.54
FCF1-207ENST00000554973 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
FCF1-207ENST00000554973 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
FCF1-207ENST00000554973 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
FCF1-207ENST00000554973 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
FCF1-207ENST00000554973 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
FCF1-207ENST00000554973 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
FCF1-207ENST00000554973 MNX1P50219 401 aaPredicted RBP11.57□□□□□ -0.56
FCF1-207ENST00000554973 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
FCF1-207ENST00000554973 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
FCF1-207ENST00000554973 MIER1Q8N108 512 aa11.53□□□□□ -0.56
FCF1-207ENST00000554973 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
FCF1-207ENST00000554973 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
FCF1-207ENST00000554973 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
FCF1-207ENST00000554973 CIZ1Q9ULV3 898 aaPredicted RBP11.47□□□□□ -0.57
FCF1-207ENST00000554973 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
FCF1-207ENST00000554973 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
FCF1-207ENST00000554973 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
FCF1-207ENST00000554973 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
FCF1-207ENST00000554973 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
FCF1-207ENST00000554973 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
FCF1-207ENST00000554973 LHX8Q68G74 356 aa11.37□□□□□ -0.59
FCF1-207ENST00000554973 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
FCF1-207ENST00000554973 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
FCF1-207ENST00000554973 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
FCF1-207ENST00000554973 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
FCF1-207ENST00000554973 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
FCF1-207ENST00000554973 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
FCF1-207ENST00000554973 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
FCF1-207ENST00000554973 GSE1Q14687 1217 aa11.24□□□□□ -0.61
FCF1-207ENST00000554973 NUBP1P53384 320 aa11.23□□□□□ -0.61
FCF1-207ENST00000554973 FAM212AQ96EL1 285 aa11.23□□□□□ -0.61
FCF1-207ENST00000554973 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
FCF1-207ENST00000554973 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
FCF1-207ENST00000554973 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
FCF1-207ENST00000554973 MAP3K13O43283 966 aa11.2□□□□□ -0.62
FCF1-207ENST00000554973 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
FCF1-207ENST00000554973 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
FCF1-207ENST00000554973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
FCF1-207ENST00000554973 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
FCF1-207ENST00000554973 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
FCF1-207ENST00000554973 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
FCF1-207ENST00000554973 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
FCF1-207ENST00000554973 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
FCF1-207ENST00000554973 STK25O00506 426 aa11.13□□□□□ -0.63
FCF1-207ENST00000554973 C7P10643 843 aa11.13□□□□□ -0.63
FCF1-207ENST00000554973 TIE1P35590 1138 aa11.13□□□□□ -0.63
FCF1-207ENST00000554973 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
FCF1-207ENST00000554973 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
FCF1-207ENST00000554973 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
FCF1-207ENST00000554973 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
FCF1-207ENST00000554973 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
FCF1-207ENST00000554973 ATN1P54259 1190 aaPredicted RBP11.1□□□□□ -0.63
FCF1-207ENST00000554973 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
FCF1-207ENST00000554973 TRPC6Q9Y210 931 aa11.09□□□□□ -0.63
FCF1-207ENST00000554973 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
FCF1-207ENST00000554973 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
FCF1-207ENST00000554973 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
FCF1-207ENST00000554973 WDR70Q9NW82 654 aa11.04□□□□□ -0.64
FCF1-207ENST00000554973 PYGBP11216 843 aa11.03□□□□□ -0.64
FCF1-207ENST00000554973 CHRM1P11229 460 aaPredicted RBP11.01□□□□□ -0.65
FCF1-207ENST00000554973 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
FCF1-207ENST00000554973 PODXL2Q9NZ53 605 aa11.01□□□□□ -0.65
FCF1-207ENST00000554973 OTUD5Q96G74 571 aa11□□□□□ -0.65
FCF1-207ENST00000554973 STK24Q9Y6E0 443 aa11□□□□□ -0.65
FCF1-207ENST00000554973 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
FCF1-207ENST00000554973 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
FCF1-207ENST00000554973 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
FCF1-207ENST00000554973 MAMSTRQ6ZN01 415 aa10.98□□□□□ -0.65
FCF1-207ENST00000554973 SEC24BO95487 1268 aa10.97□□□□□ -0.65
FCF1-207ENST00000554973 RANGAP1P46060 587 aaPredicted RBP10.97□□□□□ -0.65
FCF1-207ENST00000554973 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
FCF1-207ENST00000554973 ZC3H15Q8WU90 426 aaKnown RBP10.96□□□□□ -0.65
FCF1-207ENST00000554973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
FCF1-207ENST00000554973 IER5LQ5T953 404 aa10.95□□□□□ -0.66
FCF1-207ENST00000554973 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
FCF1-207ENST00000554973 SCUBE2Q9NQ36 999 aa10.93□□□□□ -0.66
FCF1-207ENST00000554973 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
FCF1-207ENST00000554973 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
FCF1-207ENST00000554973 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
FCF1-207ENST00000554973 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
FCF1-207ENST00000554973 CADPS2Q86UW7 1296 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms