RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
VTI1B-203ENST00000554636 FAM212AQ96EL1 285 aa9.99□□□□□ -0.81
VTI1B-203ENST00000554636 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
VTI1B-203ENST00000554636 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
VTI1B-203ENST00000554636 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
VTI1B-203ENST00000554636 SPOCK2Q92563 424 aa9.95□□□□□ -0.82
VTI1B-203ENST00000554636 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
VTI1B-203ENST00000554636 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
VTI1B-203ENST00000554636 PYGBP11216 843 aa9.89□□□□□ -0.83
VTI1B-203ENST00000554636 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
VTI1B-203ENST00000554636 MAP3K13O43283 966 aa9.88□□□□□ -0.83
VTI1B-203ENST00000554636 CLCN6P51797 869 aa9.88□□□□□ -0.83
VTI1B-203ENST00000554636 GSE1Q14687 1217 aa9.86□□□□□ -0.83
VTI1B-203ENST00000554636 DCBLD2Q96PD2 775 aa9.86□□□□□ -0.83
VTI1B-203ENST00000554636 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
VTI1B-203ENST00000554636 POTEIP0CG38 1075 aa9.82□□□□□ -0.84
VTI1B-203ENST00000554636 TRPC6Q9Y210 931 aa9.82□□□□□ -0.84
VTI1B-203ENST00000554636 IFNL1Q8IU54 200 aa9.79□□□□□ -0.84
VTI1B-203ENST00000554636 PCDHB8Q9UN66 801 aa9.77□□□□□ -0.85
VTI1B-203ENST00000554636 SGIP1Q9BQI5 828 aa9.73□□□□□ -0.85
VTI1B-203ENST00000554636 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
VTI1B-203ENST00000554636 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
VTI1B-203ENST00000554636 ATN1P54259 1190 aaPredicted RBP9.71□□□□□ -0.86
VTI1B-203ENST00000554636 PELP1Q8IZL8 1130 aaKnown RBP9.71□□□□□ -0.86
VTI1B-203ENST00000554636 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
VTI1B-203ENST00000554636 TTLL13PA6NNM8 815 aa9.69□□□□□ -0.86
VTI1B-203ENST00000554636 TIE1P35590 1138 aa9.69□□□□□ -0.86
VTI1B-203ENST00000554636 TMEM106CQ9BVX2 250 aa9.69□□□□□ -0.86
VTI1B-203ENST00000554636 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
VTI1B-203ENST00000554636 ZNF467Q7Z7K2 595 aaPredicted RBP9.68□□□□□ -0.86
VTI1B-203ENST00000554636 TRIM41Q8WV44 630 aa9.65□□□□□ -0.86
VTI1B-203ENST00000554636 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
VTI1B-203ENST00000554636 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
VTI1B-203ENST00000554636 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
VTI1B-203ENST00000554636 PKD2Q13563 968 aa9.62□□□□□ -0.87
VTI1B-203ENST00000554636 PSEN1P49768 467 aa9.61□□□□□ -0.87
VTI1B-203ENST00000554636 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
VTI1B-203ENST00000554636 SLC39A7Q92504 469 aa9.6□□□□□ -0.87
VTI1B-203ENST00000554636 PDAP1Q13442 181 aaKnown RBP9.59□□□□□ -0.87
VTI1B-203ENST00000554636 RIOK3O14730 519 aaKnown RBP9.58□□□□□ -0.88
VTI1B-203ENST00000554636 C7P10643 843 aa9.58□□□□□ -0.88
VTI1B-203ENST00000554636 LHX8Q68G74 356 aa9.58□□□□□ -0.88
VTI1B-203ENST00000554636 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
VTI1B-203ENST00000554636 SEC24BO95487 1268 aa9.55□□□□□ -0.88
VTI1B-203ENST00000554636 RGL2O15211 777 aa9.54□□□□□ -0.88
VTI1B-203ENST00000554636 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
VTI1B-203ENST00000554636 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
VTI1B-203ENST00000554636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
VTI1B-203ENST00000554636 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
VTI1B-203ENST00000554636 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
VTI1B-203ENST00000554636 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
VTI1B-203ENST00000554636 VGFO15240 615 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-203ENST00000554636 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
VTI1B-203ENST00000554636 IER5LQ5T953 404 aa9.5□□□□□ -0.89
VTI1B-203ENST00000554636 PLCG2P16885 1265 aa9.48□□□□□ -0.89
VTI1B-203ENST00000554636 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
VTI1B-203ENST00000554636 STK25O00506 426 aa9.45□□□□□ -0.9
VTI1B-203ENST00000554636 POTEJP0CG39 1038 aa9.45□□□□□ -0.9
VTI1B-203ENST00000554636 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
VTI1B-203ENST00000554636 BCL11BQ9C0K0 894 aaPredicted RBP9.45□□□□□ -0.9
VTI1B-203ENST00000554636 STK24Q9Y6E0 443 aa9.45□□□□□ -0.9
VTI1B-203ENST00000554636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.44□□□□□ -0.92e-7■□□□□ 9.4
VTI1B-203ENST00000554636 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
VTI1B-203ENST00000554636 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
VTI1B-203ENST00000554636 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
VTI1B-203ENST00000554636 OTUD5Q96G74 571 aa9.4□□□□□ -0.9
VTI1B-203ENST00000554636 PDCD7Q8N8D1 485 aaKnown RBP9.39□□□□□ -0.91
VTI1B-203ENST00000554636 DPY19L2Q6NUT2 758 aa9.37□□□□□ -0.91
VTI1B-203ENST00000554636 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
VTI1B-203ENST00000554636 SCUBE2Q9NQ36 999 aa9.36□□□□□ -0.91
VTI1B-203ENST00000554636 RTN4Q9NQC3 1192 aaKnown RBP9.36□□□□□ -0.91
VTI1B-203ENST00000554636 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
VTI1B-203ENST00000554636 MAMSTRQ6ZN01 415 aa9.34□□□□□ -0.91
VTI1B-203ENST00000554636 AMER1Q5JTC6 1135 aaPredicted RBP9.33□□□□□ -0.92
VTI1B-203ENST00000554636 G3V3G9 751 aa9.3□□□□□ -0.92
VTI1B-203ENST00000554636 SOX12O15370 315 aa9.3□□□□□ -0.92
VTI1B-203ENST00000554636 ILDR1Q86SU0 546 aaPredicted RBP9.3□□□□□ -0.92
VTI1B-203ENST00000554636 HS6ST3Q8IZP7 471 aa9.3□□□□□ -0.92
VTI1B-203ENST00000554636 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
VTI1B-203ENST00000554636 L3MBTL3Q96JM7 780 aaPredicted RBP9.29□□□□□ -0.92
VTI1B-203ENST00000554636 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
VTI1B-203ENST00000554636 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
VTI1B-203ENST00000554636 NLRP6P59044 892 aa9.27□□□□□ -0.93
VTI1B-203ENST00000554636 SLAIN1Q8ND83 568 aa9.27□□□□□ -0.93
VTI1B-203ENST00000554636 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
VTI1B-203ENST00000554636 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
VTI1B-203ENST00000554636 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
VTI1B-203ENST00000554636 MICALL2Q8IY33 904 aa9.21□□□□□ -0.94
VTI1B-203ENST00000554636 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
VTI1B-203ENST00000554636 CCDC180Q9P1Z9 1646 aa9.19□□□□□ -0.94
VTI1B-203ENST00000554636 PPP1R37O75864 691 aa9.16□□□□□ -0.94
VTI1B-203ENST00000554636 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
VTI1B-203ENST00000554636 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
VTI1B-203ENST00000554636 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
VTI1B-203ENST00000554636 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
VTI1B-203ENST00000554636 GTPBP6O43824 516 aaPredicted RBP9.07□□□□□ -0.96
VTI1B-203ENST00000554636 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
VTI1B-203ENST00000554636 SNPHO15079 494 aa9.05□□□□□ -0.96
VTI1B-203ENST00000554636 ST18O60284 1047 aa9.05□□□□□ -0.96
VTI1B-203ENST00000554636 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms