RNA–Protein interactions for RNA: ENST00000554303.1

RPGRIP1-205, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-205ENST00000554303 MS4A3Q96HJ5 214 aa6.19□□□□□ -1.42
RPGRIP1-205ENST00000554303 PLEKHG5O94827 1062 aa6.18□□□□□ -1.42
RPGRIP1-205ENST00000554303 PELP1Q8IZL8 1130 aaKnown RBP6.18□□□□□ -1.42
RPGRIP1-205ENST00000554303 KIF12Q96FN5 646 aa6.18□□□□□ -1.42
RPGRIP1-205ENST00000554303 MAP3K13O43283 966 aa6.15□□□□□ -1.42
RPGRIP1-205ENST00000554303 FBXO3Q9UK99 471 aa6.15□□□□□ -1.42
RPGRIP1-205ENST00000554303 TRPC6Q9Y210 931 aa6.15□□□□□ -1.42
RPGRIP1-205ENST00000554303 POTEB2H3BUK9 544 aa6.13□□□□□ -1.43
RPGRIP1-205ENST00000554303 ASTLQ6HA08 431 aaPredicted RBP6.13□□□□□ -1.43
RPGRIP1-205ENST00000554303 ATMINO43313 823 aaPredicted RBP6.12□□□□□ -1.43
RPGRIP1-205ENST00000554303 VASPP50552 380 aaPredicted RBP6.12□□□□□ -1.43
RPGRIP1-205ENST00000554303 ZBTB47Q9UFB7 747 aaPredicted RBP6.12□□□□□ -1.43
RPGRIP1-205ENST00000554303 ATN1P54259 1190 aaPredicted RBP6.1□□□□□ -1.43
RPGRIP1-205ENST00000554303 BMP2KQ9NSY1 1161 aaPredicted RBP6.08□□□□□ -1.44
RPGRIP1-205ENST00000554303 IFNLR1Q8IU57 520 aaPredicted RBP6.07□□□□□ -1.44
RPGRIP1-205ENST00000554303 FAM212AQ96EL1 285 aa6.07□□□□□ -1.44
RPGRIP1-205ENST00000554303 POTEFA5A3E0 1075 aa6.06□□□□□ -1.44
RPGRIP1-205ENST00000554303 POTEJP0CG39 1038 aa6.06□□□□□ -1.44
RPGRIP1-205ENST00000554303 DCAF8Q5TAQ9 597 aa6.06□□□□□ -1.44
RPGRIP1-205ENST00000554303 IFNL1Q8IU54 200 aa6.06□□□□□ -1.44
RPGRIP1-205ENST00000554303 SGIP1Q9BQI5 828 aa6.06□□□□□ -1.44
RPGRIP1-205ENST00000554303 PCDHB13Q9Y5F0 798 aa6.06□□□□□ -1.44
RPGRIP1-205ENST00000554303 TIE1P35590 1138 aa6.05□□□□□ -1.44
RPGRIP1-205ENST00000554303 KLHL34Q8N239 644 aa6.05□□□□□ -1.44
RPGRIP1-205ENST00000554303 OTUD5Q96G74 571 aa6.05□□□□□ -1.44
RPGRIP1-205ENST00000554303 METRNQ9UJH8 293 aa6.05□□□□□ -1.44
RPGRIP1-205ENST00000554303 TTLL13PA6NNM8 815 aa6.04□□□□□ -1.44
RPGRIP1-205ENST00000554303 C7P10643 843 aa6.04□□□□□ -1.44
RPGRIP1-205ENST00000554303 PYGBP11216 843 aa6.04□□□□□ -1.44
RPGRIP1-205ENST00000554303 SLC39A7Q92504 469 aa6.03□□□□□ -1.44
RPGRIP1-205ENST00000554303 PCDHB8Q9UN66 801 aa6.01□□□□□ -1.45
RPGRIP1-205ENST00000554303 COLQQ9Y215 455 aaPredicted RBP6□□□□□ -1.45
RPGRIP1-205ENST00000554303 TRIM35Q9UPQ4 493 aa5.99□□□□□ -1.45
RPGRIP1-205ENST00000554303 GSE1Q14687 1217 aa5.98□□□□□ -1.45
RPGRIP1-205ENST00000554303 CHRM1P11229 460 aaPredicted RBP5.97□□□□□ -1.45
RPGRIP1-205ENST00000554303 SPOCK2Q92563 424 aa5.97□□□□□ -1.45
RPGRIP1-205ENST00000554303 TMEM106CQ9BVX2 250 aa5.97□□□□□ -1.45
RPGRIP1-205ENST00000554303 IER5LQ5T953 404 aa5.94□□□□□ -1.46
RPGRIP1-205ENST00000554303 SEC24BO95487 1268 aa5.92□□□□□ -1.46
RPGRIP1-205ENST00000554303 IRX5P78411 483 aaPredicted RBP5.92□□□□□ -1.46
RPGRIP1-205ENST00000554303 CIZ1Q9ULV3 898 aaPredicted RBP5.92□□□□□ -1.46
RPGRIP1-205ENST00000554303 ZNF467Q7Z7K2 595 aaPredicted RBP5.9□□□□□ -1.46
RPGRIP1-205ENST00000554303 PSEN1P49768 467 aa5.89□□□□□ -1.47
RPGRIP1-205ENST00000554303 MAMSTRQ6ZN01 415 aa5.89□□□□□ -1.47
RPGRIP1-205ENST00000554303 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
RPGRIP1-205ENST00000554303 OCEL1Q9H607 264 aa5.87□□□□□ -1.47
RPGRIP1-205ENST00000554303 SCUBE2Q9NQ36 999 aa5.87□□□□□ -1.47
RPGRIP1-205ENST00000554303 PLCG2P16885 1265 aa5.85□□□□□ -1.47
RPGRIP1-205ENST00000554303 PDAP1Q13442 181 aaKnown RBP5.85□□□□□ -1.47
RPGRIP1-205ENST00000554303 PDCD7Q8N8D1 485 aaKnown RBP5.85□□□□□ -1.47
RPGRIP1-205ENST00000554303 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.47
RPGRIP1-205ENST00000554303 ILDR1Q86SU0 546 aaPredicted RBP5.83□□□□□ -1.48
RPGRIP1-205ENST00000554303 DPY19L2Q6NUT2 758 aa5.82□□□□□ -1.48
RPGRIP1-205ENST00000554303 FAM163AQ96GL9 167 aaPredicted RBP5.82□□□□□ -1.48
RPGRIP1-205ENST00000554303 MKRN3Q13064 507 aaKnown RBP5.81□□□□□ -1.48
RPGRIP1-205ENST00000554303 TRIM41Q8WV44 630 aa5.81□□□□□ -1.48
RPGRIP1-205ENST00000554303 CABP2Q9NPB3 220 aa5.81□□□□□ -1.48
RPGRIP1-205ENST00000554303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.81□□□□□ -1.48
RPGRIP1-205ENST00000554303 POTEMA6NI47 508 aa5.8□□□□□ -1.48
RPGRIP1-205ENST00000554303 POTEGQ6S5H5 508 aa5.8□□□□□ -1.48
RPGRIP1-205ENST00000554303 SLAIN1Q8ND83 568 aa5.8□□□□□ -1.48
RPGRIP1-205ENST00000554303 GOLGA2Q08379 1002 aa5.79□□□□□ -1.48
RPGRIP1-205ENST00000554303 EFCAB3Q8N7B9 438 aa5.78□□□□□ -1.48
RPGRIP1-205ENST00000554303 RIOK3O14730 519 aaKnown RBP5.77□□□□□ -1.49
RPGRIP1-205ENST00000554303 PKD2Q13563 968 aa5.77□□□□□ -1.49
RPGRIP1-205ENST00000554303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.76□□□□□ -1.49
RPGRIP1-205ENST00000554303 ZFP91Q96JP5 570 aaPredicted RBP5.76□□□□□ -1.49
RPGRIP1-205ENST00000554303 ST18O60284 1047 aa5.75□□□□□ -1.49
RPGRIP1-205ENST00000554303 L3MBTL3Q96JM7 780 aaPredicted RBP5.75□□□□□ -1.49
RPGRIP1-205ENST00000554303 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.75□□□□□ -1.49
RPGRIP1-205ENST00000554303 VGFO15240 615 aaPredicted RBP5.73□□□□□ -1.49
RPGRIP1-205ENST00000554303 MS4A4AQ96JQ5 239 aa5.72□□□□□ -1.49
RPGRIP1-205ENST00000554303 RGL2O15211 777 aa5.71□□□□□ -1.5
RPGRIP1-205ENST00000554303 ECM2O94769 699 aaPredicted RBP5.71□□□□□ -1.5
RPGRIP1-205ENST00000554303 TMEM121BQ9BXQ6 578 aaPredicted RBP5.71□□□□□ -1.5
RPGRIP1-205ENST00000554303 BOLA1Q9Y3E2 137 aa5.71□□□□□ -1.5
RPGRIP1-205ENST00000554303 SOX12O15370 315 aa5.7□□□□□ -1.5
RPGRIP1-205ENST00000554303 C3orf67Q6ZVT6 689 aa5.7□□□□□ -1.5
RPGRIP1-205ENST00000554303 PHF8Q9UPP1 1060 aa5.7□□□□□ -1.5
RPGRIP1-205ENST00000554303 BCL11BQ9C0K0 894 aaPredicted RBP5.69□□□□□ -1.5
RPGRIP1-205ENST00000554303 FBXO22Q8NEZ5 403 aa5.68□□□□□ -1.5
RPGRIP1-205ENST00000554303 PLSCR2Q9NRY7 297 aa5.68□□□□□ -1.5
RPGRIP1-205ENST00000554303 TMEM92Q6UXU6 159 aa5.67□□□□□ -1.5
RPGRIP1-205ENST00000554303 PCDH10Q9P2E7 1040 aa5.67□□□□□ -1.5
RPGRIP1-205ENST00000554303 STK24Q9Y6E0 443 aa5.67□□□□□ -1.5
RPGRIP1-205ENST00000554303 SNPHO15079 494 aa5.66□□□□□ -1.5
RPGRIP1-205ENST00000554303 HOXB3P14651 431 aaPredicted RBP5.66□□□□□ -1.5
RPGRIP1-205ENST00000554303 MICALL2Q8IY33 904 aa5.66□□□□□ -1.5
RPGRIP1-205ENST00000554303 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
RPGRIP1-205ENST00000554303 STK25O00506 426 aa5.65□□□□□ -1.5
RPGRIP1-205ENST00000554303 CDAN1Q8IWY9 1227 aa5.65□□□□□ -1.5
RPGRIP1-205ENST00000554303 MARVELD3Q96A59 401 aa5.65□□□□□ -1.5
RPGRIP1-205ENST00000554303 POTEB3A0JP26 581 aa5.63□□□□□ -1.51
RPGRIP1-205ENST00000554303 G3V3G9 751 aa5.63□□□□□ -1.51
RPGRIP1-205ENST00000554303 NLRP6P59044 892 aa5.63□□□□□ -1.51
RPGRIP1-205ENST00000554303 POTEBQ6S5H4 581 aa5.63□□□□□ -1.51
RPGRIP1-205ENST00000554303 TAOK2Q9UL54 1235 aa5.63□□□□□ -1.51
RPGRIP1-205ENST00000554303 PPP1R37O75864 691 aa5.59□□□□□ -1.51
RPGRIP1-205ENST00000554303 FAM205CA6NFA0 338 aa5.57□□□□□ -1.52
RPGRIP1-205ENST00000554303 KIF3CO14782 793 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms