RNA–Protein interactions for RNA: ENST00000554207.1

PSMA3-205, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-205ENST00000554207 PKD2Q13563 968 aa13.48□□□□□ -0.25
PSMA3-205ENST00000554207 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
PSMA3-205ENST00000554207 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
PSMA3-205ENST00000554207 POTEMA6NI47 508 aa13.46□□□□□ -0.25
PSMA3-205ENST00000554207 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
PSMA3-205ENST00000554207 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
PSMA3-205ENST00000554207 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
PSMA3-205ENST00000554207 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
PSMA3-205ENST00000554207 PHF12Q96QT6 1004 aa13.38□□□□□ -0.27
PSMA3-205ENST00000554207 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
PSMA3-205ENST00000554207 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
PSMA3-205ENST00000554207 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
PSMA3-205ENST00000554207 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
PSMA3-205ENST00000554207 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
PSMA3-205ENST00000554207 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
PSMA3-205ENST00000554207 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
PSMA3-205ENST00000554207 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
PSMA3-205ENST00000554207 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
PSMA3-205ENST00000554207 NUBP1P53384 320 aa13.23□□□□□ -0.29
PSMA3-205ENST00000554207 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
PSMA3-205ENST00000554207 RGL2O15211 777 aa13.22□□□□□ -0.29
PSMA3-205ENST00000554207 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
PSMA3-205ENST00000554207 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
PSMA3-205ENST00000554207 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
PSMA3-205ENST00000554207 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
PSMA3-205ENST00000554207 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
PSMA3-205ENST00000554207 SLC39A7Q92504 469 aa13.12□□□□□ -0.31
PSMA3-205ENST00000554207 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
PSMA3-205ENST00000554207 MAP3K13O43283 966 aa13.09□□□□□ -0.31
PSMA3-205ENST00000554207 C7P10643 843 aa13.09□□□□□ -0.31
PSMA3-205ENST00000554207 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
PSMA3-205ENST00000554207 RNF25Q96BH1 459 aaPredicted RBP13.07□□□□□ -0.32
PSMA3-205ENST00000554207 ATMINO43313 823 aaPredicted RBP13.05□□□□□ -0.32
PSMA3-205ENST00000554207 GSE1Q14687 1217 aa13.05□□□□□ -0.32
PSMA3-205ENST00000554207 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
PSMA3-205ENST00000554207 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
PSMA3-205ENST00000554207 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
PSMA3-205ENST00000554207 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
PSMA3-205ENST00000554207 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
PSMA3-205ENST00000554207 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
PSMA3-205ENST00000554207 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
PSMA3-205ENST00000554207 ATN1P54259 1190 aaPredicted RBP12.97□□□□□ -0.33
PSMA3-205ENST00000554207 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
PSMA3-205ENST00000554207 SGIP1Q9BQI5 828 aa12.97□□□□□ -0.33
PSMA3-205ENST00000554207 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
PSMA3-205ENST00000554207 PYGBP11216 843 aa12.95□□□□□ -0.34
PSMA3-205ENST00000554207 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
PSMA3-205ENST00000554207 TIE1P35590 1138 aa12.94□□□□□ -0.34
PSMA3-205ENST00000554207 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
PSMA3-205ENST00000554207 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
PSMA3-205ENST00000554207 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
PSMA3-205ENST00000554207 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
PSMA3-205ENST00000554207 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
PSMA3-205ENST00000554207 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
PSMA3-205ENST00000554207 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
PSMA3-205ENST00000554207 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
PSMA3-205ENST00000554207 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
PSMA3-205ENST00000554207 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
PSMA3-205ENST00000554207 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
PSMA3-205ENST00000554207 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
PSMA3-205ENST00000554207 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
PSMA3-205ENST00000554207 CDAN1Q8IWY9 1227 aa12.79□□□□□ -0.36
PSMA3-205ENST00000554207 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
PSMA3-205ENST00000554207 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
PSMA3-205ENST00000554207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
PSMA3-205ENST00000554207 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
PSMA3-205ENST00000554207 STK25O00506 426 aa12.76□□□□□ -0.37
PSMA3-205ENST00000554207 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
PSMA3-205ENST00000554207 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
PSMA3-205ENST00000554207 SEC24BO95487 1268 aa12.74□□□□□ -0.37
PSMA3-205ENST00000554207 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
PSMA3-205ENST00000554207 IER5LQ5T953 404 aa12.72□□□□□ -0.37
PSMA3-205ENST00000554207 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
PSMA3-205ENST00000554207 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
PSMA3-205ENST00000554207 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
PSMA3-205ENST00000554207 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
PSMA3-205ENST00000554207 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
PSMA3-205ENST00000554207 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
PSMA3-205ENST00000554207 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
PSMA3-205ENST00000554207 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
PSMA3-205ENST00000554207 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
PSMA3-205ENST00000554207 PLCG2P16885 1265 aa12.61□□□□□ -0.39
PSMA3-205ENST00000554207 PSEN1P49768 467 aa12.6□□□□□ -0.39
PSMA3-205ENST00000554207 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
PSMA3-205ENST00000554207 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
PSMA3-205ENST00000554207 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
PSMA3-205ENST00000554207 ST18O60284 1047 aa12.56□□□□□ -0.4
PSMA3-205ENST00000554207 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
PSMA3-205ENST00000554207 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
PSMA3-205ENST00000554207 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
PSMA3-205ENST00000554207 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
PSMA3-205ENST00000554207 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
PSMA3-205ENST00000554207 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
PSMA3-205ENST00000554207 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
PSMA3-205ENST00000554207 MFRPQ9BY79 579 aa12.45□□□□□ -0.42
PSMA3-205ENST00000554207 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
PSMA3-205ENST00000554207 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
PSMA3-205ENST00000554207 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
PSMA3-205ENST00000554207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
PSMA3-205ENST00000554207 SNPHO15079 494 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms