RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-206ENST00000554005 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
FOXN3-206ENST00000554005 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
FOXN3-206ENST00000554005 CHRM1P11229 460 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-206ENST00000554005 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
FOXN3-206ENST00000554005 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
FOXN3-206ENST00000554005 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
FOXN3-206ENST00000554005 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
FOXN3-206ENST00000554005 PYGBP11216 843 aa12.93□□□□□ -0.34
FOXN3-206ENST00000554005 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-206ENST00000554005 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
FOXN3-206ENST00000554005 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
FOXN3-206ENST00000554005 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-206ENST00000554005 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
FOXN3-206ENST00000554005 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-206ENST00000554005 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-206ENST00000554005 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-206ENST00000554005 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
FOXN3-206ENST00000554005 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
FOXN3-206ENST00000554005 STK25O00506 426 aa12.78□□□□□ -0.36
FOXN3-206ENST00000554005 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
FOXN3-206ENST00000554005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-206ENST00000554005 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-206ENST00000554005 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-206ENST00000554005 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
FOXN3-206ENST00000554005 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
FOXN3-206ENST00000554005 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-206ENST00000554005 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-206ENST00000554005 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
FOXN3-206ENST00000554005 PCDHB13Q9Y5F0 798 aa12.72□□□□□ -0.37
FOXN3-206ENST00000554005 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
FOXN3-206ENST00000554005 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
FOXN3-206ENST00000554005 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
FOXN3-206ENST00000554005 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
FOXN3-206ENST00000554005 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
FOXN3-206ENST00000554005 MAP3K13O43283 966 aa12.68□□□□□ -0.38
FOXN3-206ENST00000554005 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
FOXN3-206ENST00000554005 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
FOXN3-206ENST00000554005 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
FOXN3-206ENST00000554005 PSEN1P49768 467 aa12.63□□□□□ -0.39
FOXN3-206ENST00000554005 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-206ENST00000554005 VSIG10Q8N0Z9 540 aa12.62□□□□□ -0.39
FOXN3-206ENST00000554005 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
FOXN3-206ENST00000554005 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
FOXN3-206ENST00000554005 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.41
FOXN3-206ENST00000554005 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
FOXN3-206ENST00000554005 HAX1O00165 279 aa12.48□□□□□ -0.41
FOXN3-206ENST00000554005 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
FOXN3-206ENST00000554005 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
FOXN3-206ENST00000554005 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
FOXN3-206ENST00000554005 EVX2Q03828 476 aa12.44□□□□□ -0.42
FOXN3-206ENST00000554005 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
FOXN3-206ENST00000554005 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
FOXN3-206ENST00000554005 SOX12O15370 315 aa12.39□□□□□ -0.43
FOXN3-206ENST00000554005 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-206ENST00000554005 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
FOXN3-206ENST00000554005 TIE1P35590 1138 aa12.37□□□□□ -0.43
FOXN3-206ENST00000554005 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
FOXN3-206ENST00000554005 NLRP6P59044 892 aa12.36□□□□□ -0.43
FOXN3-206ENST00000554005 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
FOXN3-206ENST00000554005 CLCN6P51797 869 aa12.33□□□□□ -0.44
FOXN3-206ENST00000554005 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
FOXN3-206ENST00000554005 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-206ENST00000554005 PPP1R37O75864 691 aa12.31□□□□□ -0.44
FOXN3-206ENST00000554005 POTEHQ6S545 545 aa12.29□□□□□ -0.44
FOXN3-206ENST00000554005 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
FOXN3-206ENST00000554005 BCANQ96GW7 911 aa12.29□□□□□ -0.44
FOXN3-206ENST00000554005 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
FOXN3-206ENST00000554005 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
FOXN3-206ENST00000554005 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
FOXN3-206ENST00000554005 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
FOXN3-206ENST00000554005 GABBR2O75899 941 aa12.2□□□□□ -0.46
FOXN3-206ENST00000554005 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
FOXN3-206ENST00000554005 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
FOXN3-206ENST00000554005 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
FOXN3-206ENST00000554005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■□□□□ 10.6
FOXN3-206ENST00000554005 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
FOXN3-206ENST00000554005 IER5LQ5T953 404 aa12.1□□□□□ -0.47
FOXN3-206ENST00000554005 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
FOXN3-206ENST00000554005 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-206ENST00000554005 NBR1Q14596 966 aa12.09□□□□□ -0.47
FOXN3-206ENST00000554005 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
FOXN3-206ENST00000554005 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
FOXN3-206ENST00000554005 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
FOXN3-206ENST00000554005 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
FOXN3-206ENST00000554005 KCNV2Q8TDN2 545 aa12.06□□□□□ -0.48
FOXN3-206ENST00000554005 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
FOXN3-206ENST00000554005 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
FOXN3-206ENST00000554005 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
FOXN3-206ENST00000554005 PDE4AP27815 886 aa12.03□□□□□ -0.48
FOXN3-206ENST00000554005 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
FOXN3-206ENST00000554005 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
FOXN3-206ENST00000554005 PLCG2P16885 1265 aa12.01□□□□□ -0.49
FOXN3-206ENST00000554005 MFSD10Q14728 455 aa12.01□□□□□ -0.49
FOXN3-206ENST00000554005 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-206ENST00000554005 E2F4Q16254 413 aa11.98□□□□□ -0.49
FOXN3-206ENST00000554005 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
FOXN3-206ENST00000554005 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
FOXN3-206ENST00000554005 DDX27Q96GQ7 796 aaKnown RBP11.97□□□□□ -0.49
FOXN3-206ENST00000554005 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms