RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
CEP290-206ENST00000552770 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
CEP290-206ENST00000552770 ATMINO43313 823 aaPredicted RBP15.06■□□□□ 0
CEP290-206ENST00000552770 KIF12Q96FN5 646 aa15.06■□□□□ 0
CEP290-206ENST00000552770 TRPC6Q9Y210 931 aa15.05■□□□□ -0
CEP290-206ENST00000552770 OTUD5Q96G74 571 aa15.04■□□□□ -0
CEP290-206ENST00000552770 PLCD3Q8N3E9 789 aa15.02■□□□□ -0
CEP290-206ENST00000552770 MAP3K13O43283 966 aa14.99□□□□□ -0.01
CEP290-206ENST00000552770 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
CEP290-206ENST00000552770 METRNQ9UJH8 293 aa14.98□□□□□ -0.01
CEP290-206ENST00000552770 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
CEP290-206ENST00000552770 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
CEP290-206ENST00000552770 NUBP1P53384 320 aa14.95□□□□□ -0.02
CEP290-206ENST00000552770 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
CEP290-206ENST00000552770 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
CEP290-206ENST00000552770 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
CEP290-206ENST00000552770 C7P10643 843 aa14.87□□□□□ -0.03
CEP290-206ENST00000552770 TIE1P35590 1138 aa14.81□□□□□ -0.04
CEP290-206ENST00000552770 TTLL13PA6NNM8 815 aa14.8□□□□□ -0.04
CEP290-206ENST00000552770 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
CEP290-206ENST00000552770 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
CEP290-206ENST00000552770 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
CEP290-206ENST00000552770 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
CEP290-206ENST00000552770 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
CEP290-206ENST00000552770 SGIP1Q9BQI5 828 aa14.71□□□□□ -0.05
CEP290-206ENST00000552770 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
CEP290-206ENST00000552770 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
CEP290-206ENST00000552770 PYGBP11216 843 aa14.64□□□□□ -0.07
CEP290-206ENST00000552770 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
CEP290-206ENST00000552770 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
CEP290-206ENST00000552770 LCE2DQ5TA82 110 aaPredicted RBP14.61□□□□□ -0.07
CEP290-206ENST00000552770 MAMSTRQ6ZN01 415 aa14.61□□□□□ -0.07
CEP290-206ENST00000552770 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
CEP290-206ENST00000552770 POTEMA6NI47 508 aa14.6□□□□□ -0.07
CEP290-206ENST00000552770 SEC24BO95487 1268 aa14.58□□□□□ -0.08
CEP290-206ENST00000552770 SCUBE2Q9NQ36 999 aa14.57□□□□□ -0.08
CEP290-206ENST00000552770 PCDHB8Q9UN66 801 aa14.57□□□□□ -0.08
CEP290-206ENST00000552770 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
CEP290-206ENST00000552770 IER5LQ5T953 404 aa14.55□□□□□ -0.08
CEP290-206ENST00000552770 KLHL34Q8N239 644 aa14.52□□□□□ -0.09
CEP290-206ENST00000552770 PLSCR2Q9NRY7 297 aa14.52□□□□□ -0.09
CEP290-206ENST00000552770 IRX5P78411 483 aaPredicted RBP14.48□□□□□ -0.09
CEP290-206ENST00000552770 FAM163AQ96GL9 167 aaPredicted RBP14.47□□□□□ -0.09
CEP290-206ENST00000552770 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
CEP290-206ENST00000552770 PLCG2P16885 1265 aa14.41□□□□□ -0.1
CEP290-206ENST00000552770 GSE1Q14687 1217 aa14.4□□□□□ -0.1
CEP290-206ENST00000552770 SLAIN1Q8ND83 568 aa14.34□□□□□ -0.11
CEP290-206ENST00000552770 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
CEP290-206ENST00000552770 OCEL1Q9H607 264 aa14.33□□□□□ -0.12
CEP290-206ENST00000552770 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
CEP290-206ENST00000552770 PDCD7Q8N8D1 485 aaKnown RBP14.3□□□□□ -0.12
CEP290-206ENST00000552770 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
CEP290-206ENST00000552770 PSEN1P49768 467 aa14.27□□□□□ -0.13
CEP290-206ENST00000552770 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
CEP290-206ENST00000552770 ST18O60284 1047 aa14.23□□□□□ -0.13
CEP290-206ENST00000552770 PCDH10Q9P2E7 1040 aa14.19□□□□□ -0.14
CEP290-206ENST00000552770 MKRN3Q13064 507 aaKnown RBP14.17□□□□□ -0.14
CEP290-206ENST00000552770 PDAP1Q13442 181 aaKnown RBP14.16□□□□□ -0.14
CEP290-206ENST00000552770 GOLGA2Q08379 1002 aa14.15□□□□□ -0.14
CEP290-206ENST00000552770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
CEP290-206ENST00000552770 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.14□□□□□ -0.15
CEP290-206ENST00000552770 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
CEP290-206ENST00000552770 ILDR1Q86SU0 546 aaPredicted RBP14.12□□□□□ -0.15
CEP290-206ENST00000552770 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
CEP290-206ENST00000552770 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
CEP290-206ENST00000552770 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
CEP290-206ENST00000552770 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
CEP290-206ENST00000552770 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
CEP290-206ENST00000552770 RNF25Q96BH1 459 aaPredicted RBP14□□□□□ -0.17
CEP290-206ENST00000552770 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
CEP290-206ENST00000552770 SNPHO15079 494 aa13.96□□□□□ -0.17
CEP290-206ENST00000552770 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
CEP290-206ENST00000552770 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
CEP290-206ENST00000552770 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
CEP290-206ENST00000552770 POTEB3A0JP26 581 aa13.88□□□□□ -0.19
CEP290-206ENST00000552770 POTEBQ6S5H4 581 aa13.88□□□□□ -0.19
CEP290-206ENST00000552770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
CEP290-206ENST00000552770 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
CEP290-206ENST00000552770 HOXB3P14651 431 aaPredicted RBP13.86□□□□□ -0.19
CEP290-206ENST00000552770 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
CEP290-206ENST00000552770 EMP3P54852 163 aa13.83□□□□□ -0.2
CEP290-206ENST00000552770 MS4A4AQ96JQ5 239 aa13.83□□□□□ -0.2
CEP290-206ENST00000552770 G3V3G9 751 aa13.8□□□□□ -0.2
CEP290-206ENST00000552770 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
CEP290-206ENST00000552770 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
CEP290-206ENST00000552770 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
CEP290-206ENST00000552770 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
CEP290-206ENST00000552770 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
CEP290-206ENST00000552770 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
CEP290-206ENST00000552770 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
CEP290-206ENST00000552770 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
CEP290-206ENST00000552770 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
CEP290-206ENST00000552770 MMRN1Q13201 1228 aa13.73□□□□□ -0.21
CEP290-206ENST00000552770 SOX12O15370 315 aa13.72□□□□□ -0.21
CEP290-206ENST00000552770 BCL11BQ9C0K0 894 aaPredicted RBP13.68□□□□□ -0.22
CEP290-206ENST00000552770 HOXB1P14653 301 aaPredicted RBP13.67□□□□□ -0.22
CEP290-206ENST00000552770 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
CEP290-206ENST00000552770 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
CEP290-206ENST00000552770 DOK7Q18PE1 504 aa13.63□□□□□ -0.23
CEP290-206ENST00000552770 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms