RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	PUS7	Q96PZ0	661 aa	Known RBP	5.6	□□□□□ -1.51
CNOT2-231	ENST00000551483	ZNF526	Q8TF50	670 aa	Predicted RBP	5.6	□□□□□ -1.51
CNOT2-231	ENST00000551483	ZNF592	Q92610	1267 aa		5.6	□□□□□ -1.51
CNOT2-231	ENST00000551483	RBM10	P98175	930 aa	Known RBP	5.59	□□□□□ -1.51
CNOT2-231	ENST00000551483	BRPF3	Q9ULD4	1205 aa		5.59	□□□□□ -1.52
CNOT2-231	ENST00000551483	SALL2	Q9Y467	1007 aa	Predicted RBP	5.59	□□□□□ -1.52
CNOT2-231	ENST00000551483	DEK	P35659	375 aa	Known RBP	5.58	□□□□□ -1.52
CNOT2-231	ENST00000551483	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.58	□□□□□ -1.52
CNOT2-231	ENST00000551483	ZFP91	Q96JP5	570 aa	Predicted RBP	5.58	□□□□□ -1.52
CNOT2-231	ENST00000551483	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.57	□□□□□ -1.52
CNOT2-231	ENST00000551483	RSPH6A	Q9H0K4	717 aa		5.56	□□□□□ -1.52
CNOT2-231	ENST00000551483	MSH5	O43196	834 aa		5.56	□□□□□ -1.52
CNOT2-231	ENST00000551483	PSMD1	Q99460	953 aa		5.56	□□□□□ -1.52
CNOT2-231	ENST00000551483	NCL	P19338	710 aa	Known RBP	5.56	□□□□□ -1.52
CNOT2-231	ENST00000551483	MYT1L	Q9UL68	1186 aa		5.56	□□□□□ -1.52
CNOT2-231	ENST00000551483	TICAM2	Q86XR7	235 aa		5.55	□□□□□ -1.52
CNOT2-231	ENST00000551483	USP35	Q9P2H5	1018 aa		5.55	□□□□□ -1.52
CNOT2-231	ENST00000551483	PRDM10	Q9NQV6	1147 aa		5.55	□□□□□ -1.52
CNOT2-231	ENST00000551483	PPP4R3CP	Q6ZMV5	832 aa		5.54	□□□□□ -1.52
CNOT2-231	ENST00000551483	ZNF428	Q96B54	188 aa		5.54	□□□□□ -1.52
CNOT2-231	ENST00000551483	RBM25	P49756	843 aa	Known RBP	5.53	□□□□□ -1.52
CNOT2-231	ENST00000551483	CLSTN1	O94985	981 aa		5.53	□□□□□ -1.52
CNOT2-231	ENST00000551483	ERICH6B	Q5W0A0	696 aa		5.53	□□□□□ -1.52
CNOT2-231	ENST00000551483	RAD21	O60216	631 aa		5.52	□□□□□ -1.53
CNOT2-231	ENST00000551483	NECTIN2	Q92692	538 aa		5.52	□□□□□ -1.53
CNOT2-231	ENST00000551483	CWC22	Q9HCG8	908 aa	Known RBP	5.52	□□□□□ -1.53
CNOT2-231	ENST00000551483	PPM1G	O15355	546 aa	Predicted RBP	5.52	□□□□□ -1.53
CNOT2-231	ENST00000551483	TSHZ2	Q9NRE2	1034 aa		5.52	□□□□□ -1.53
CNOT2-231	ENST00000551483	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.51	□□□□□ -1.53
CNOT2-231	ENST00000551483	TRH	P20396	242 aa	Predicted RBP	5.5	□□□□□ -1.53
CNOT2-231	ENST00000551483	TMED8	Q6PL24	325 aa	Predicted RBP	5.5	□□□□□ -1.53
CNOT2-231	ENST00000551483	KCTD17	Q8N5Z5	321 aa		5.5	□□□□□ -1.53
CNOT2-231	ENST00000551483	NPM3	O75607	178 aa	Known RBP	5.5	□□□□□ -1.53
CNOT2-231	ENST00000551483	CNPY4	Q8N129	248 aa		5.5	□□□□□ -1.53
CNOT2-231	ENST00000551483	PTMS	P20962	102 aa		5.5	□□□□□ -1.53
CNOT2-231	ENST00000551483	CERS3	Q8IU89	383 aa		5.48	□□□□□ -1.53
CNOT2-231	ENST00000551483	FOXD4L5	Q5VV16	416 aa	Predicted RBP	5.48	□□□□□ -1.53
CNOT2-231	ENST00000551483	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.48	□□□□□ -1.53
CNOT2-231	ENST00000551483	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.48	□□□□□ -1.53
CNOT2-231	ENST00000551483	ZMYND15	Q9H091	742 aa		5.48	□□□□□ -1.53
CNOT2-231	ENST00000551483	PLCD4	Q9BRC7	762 aa		5.47	□□□□□ -1.53
CNOT2-231	ENST00000551483	WWC1	Q8IX03	1113 aa		5.47	□□□□□ -1.53
CNOT2-231	ENST00000551483	ARID3C	A6NKF2	412 aa		5.46	□□□□□ -1.54
CNOT2-231	ENST00000551483	MTMR7	Q9Y216	660 aa		5.45	□□□□□ -1.54
CNOT2-231	ENST00000551483	ZNF692	Q9BU19	519 aa	Predicted RBP	5.44	□□□□□ -1.54
CNOT2-231	ENST00000551483	FAM177A1	Q8N128	213 aa	Predicted RBP	5.43	□□□□□ -1.54
CNOT2-231	ENST00000551483	RTL5	Q5HYW3	569 aa	Predicted RBP	5.42	□□□□□ -1.54
CNOT2-231	ENST00000551483	AEBP1	Q8IUX7	1158 aa		5.42	□□□□□ -1.54
CNOT2-231	ENST00000551483	NPM1	P06748	294 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
CNOT2-231	ENST00000551483	YTHDC1	Q96MU7	727 aa	Known RBP	5.42	□□□□□ -1.54
CNOT2-231	ENST00000551483	ACIN1	Q9UKV3	1341 aa	Known RBP	5.42	□□□□□ -1.54
CNOT2-231	ENST00000551483	CHMP4B	Q9H444	224 aa	Known RBP	5.4	□□□□□ -1.54
CNOT2-231	ENST00000551483	PRDM16	Q9HAZ2	1276 aa		5.4	□□□□□ -1.54
CNOT2-231	ENST00000551483	C1orf115	Q9H7X2	142 aa		5.4	□□□□□ -1.54
CNOT2-231	ENST00000551483	OS9	Q13438	667 aa	Predicted RBP	5.4	□□□□□ -1.55
CNOT2-231	ENST00000551483	SECISBP2L	Q93073	1101 aa	Known RBP	5.4	□□□□□ -1.55
CNOT2-231	ENST00000551483	TEX2	Q8IWB9	1127 aa		5.4	□□□□□ -1.55
CNOT2-231	ENST00000551483	KDM4A	O75164	1064 aa		5.39	□□□□□ -1.55
CNOT2-231	ENST00000551483	PATL2	C9JE40	543 aa	Known RBP	5.39	□□□□□ -1.55
CNOT2-231	ENST00000551483	BRPF1	P55201	1214 aa	Predicted RBP	5.38	□□□□□ -1.55
CNOT2-231	ENST00000551483	NEUROD2	Q15784	382 aa		5.38	□□□□□ -1.55
CNOT2-231	ENST00000551483	IPO4	Q8TEX9	1081 aa	Known RBP	5.38	□□□□□ -1.55
CNOT2-231	ENST00000551483	CCDC27	Q2M243	656 aa		5.38	□□□□□ -1.55
CNOT2-231	ENST00000551483	PTMA	P06454	111 aa	Known RBP	5.37	□□□□□ -1.55
CNOT2-231	ENST00000551483	ANAPC15	P60006	121 aa		5.37	□□□□□ -1.55
CNOT2-231	ENST00000551483	APBB1	O00213	710 aa		5.37	□□□□□ -1.55
CNOT2-231	ENST00000551483	BBX	Q8WY36	941 aa	Predicted RBP	5.36	□□□□□ -1.55
CNOT2-231	ENST00000551483	FAM50A	Q14320	339 aa	Known RBP	5.36	□□□□□ -1.55
CNOT2-231	ENST00000551483	GPATCH11	Q8N954	259 aa		5.35	□□□□□ -1.55
CNOT2-231	ENST00000551483	FTSJ3	Q8IY81	847 aa	Known RBP	5.35	□□□□□ -1.55
CNOT2-231	ENST00000551483	CC2D2B	Q6DHV5	1058 aa		5.35	□□□□□ -1.55
CNOT2-231	ENST00000551483	FAM9B	Q8IZU0	186 aa		5.35	□□□□□ -1.55
CNOT2-231	ENST00000551483	TMCO4	Q5TGY1	634 aa		5.34	□□□□□ -1.55
CNOT2-231	ENST00000551483	SET	Q01105	290 aa	Predicted RBP	5.34	□□□□□ -1.55
CNOT2-231	ENST00000551483	FAM43B	Q6ZT52	329 aa	Predicted RBP	5.34	□□□□□ -1.55
CNOT2-231	ENST00000551483	PPARGC1B	Q86YN6	1023 aa	Known RBP	5.34	□□□□□ -1.55
CNOT2-231	ENST00000551483	RGS22	Q8NE09	1264 aa		5.34	□□□□□ -1.55
CNOT2-231	ENST00000551483	SPRYD3	Q8NCJ5	442 aa		5.33	□□□□□ -1.56
CNOT2-231	ENST00000551483		E9PSI1	815 aa		5.33	□□□□□ -1.56
CNOT2-231	ENST00000551483	NEFM	P07197	916 aa		5.33	□□□□□ -1.56
CNOT2-231	ENST00000551483	FAM193A	P78312	1265 aa		5.33	□□□□□ -1.56
CNOT2-231	ENST00000551483	CANX	P27824	592 aa	Known RBP	5.32	□□□□□ -1.56
CNOT2-231	ENST00000551483	CNGB1	Q14028	1251 aa	Predicted RBP	5.32	□□□□□ -1.56
CNOT2-231	ENST00000551483	MCC	P23508	829 aa		5.32	□□□□□ -1.56
CNOT2-231	ENST00000551483	MFAP1	P55081	439 aa	Known RBP	5.31	□□□□□ -1.56
CNOT2-231	ENST00000551483	FOXD4L1	Q9NU39	408 aa		5.31	□□□□□ -1.56
CNOT2-231	ENST00000551483	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.3	□□□□□ -1.56	2e-6	■■□□□ 11.6
CNOT2-231	ENST00000551483	DNAJC2	Q99543	621 aa	Known RBP	5.3	□□□□□ -1.56
CNOT2-231	ENST00000551483	GZF1	Q9H116	711 aa	Predicted RBP	5.3	□□□□□ -1.56
CNOT2-231	ENST00000551483	KCNG1	Q9UIX4	513 aa		5.29	□□□□□ -1.56
CNOT2-231	ENST00000551483	GRIPAP1	Q4V328	841 aa		5.28	□□□□□ -1.56
CNOT2-231	ENST00000551483	RNF216	Q9NWF9	866 aa	Predicted RBP	5.28	□□□□□ -1.56
CNOT2-231	ENST00000551483	NEUROD1	Q13562	356 aa		5.28	□□□□□ -1.56
CNOT2-231	ENST00000551483	PKD2	Q13563	968 aa		5.27	□□□□□ -1.57
CNOT2-231	ENST00000551483	NOL8	Q76FK4	1167 aa	Known RBP	5.27	□□□□□ -1.57
CNOT2-231	ENST00000551483	DNAJC5B	Q9UF47	199 aa		5.27	□□□□□ -1.57
CNOT2-231	ENST00000551483	CHRM1	P11229	460 aa	Predicted RBP	5.27	□□□□□ -1.57
CNOT2-231	ENST00000551483	ZNF316	A6NFI3	1004 aa	Predicted RBP	5.26	□□□□□ -1.57
CNOT2-231	ENST00000551483	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	5.26	□□□□□ -1.57
CNOT2-231	ENST00000551483	FOXD4L3	Q6VB84	417 aa	Predicted RBP	5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms