RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.82
CCNT1-203ENST00000550457 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
CCNT1-203ENST00000550457 KIF12Q96FN5 646 aa9.93□□□□□ -0.82
CCNT1-203ENST00000550457 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
CCNT1-203ENST00000550457 POTEB2H3BUK9 544 aa9.9□□□□□ -0.82
CCNT1-203ENST00000550457 ATMINO43313 823 aaPredicted RBP9.9□□□□□ -0.82
CCNT1-203ENST00000550457 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
CCNT1-203ENST00000550457 NUBP1P53384 320 aa9.89□□□□□ -0.83
CCNT1-203ENST00000550457 MAP3K13O43283 966 aa9.87□□□□□ -0.83
CCNT1-203ENST00000550457 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
CCNT1-203ENST00000550457 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
CCNT1-203ENST00000550457 ATN1P54259 1190 aaPredicted RBP9.83□□□□□ -0.84
CCNT1-203ENST00000550457 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
CCNT1-203ENST00000550457 BMP2KQ9NSY1 1161 aaPredicted RBP9.82□□□□□ -0.84
CCNT1-203ENST00000550457 METRNQ9UJH8 293 aa9.82□□□□□ -0.84
CCNT1-203ENST00000550457 SLC39A7Q92504 469 aa9.8□□□□□ -0.84
CCNT1-203ENST00000550457 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
CCNT1-203ENST00000550457 C7P10643 843 aa9.79□□□□□ -0.84
CCNT1-203ENST00000550457 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
CCNT1-203ENST00000550457 TIE1P35590 1138 aa9.76□□□□□ -0.85
CCNT1-203ENST00000550457 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
CCNT1-203ENST00000550457 PCDHB13Q9Y5F0 798 aa9.76□□□□□ -0.85
CCNT1-203ENST00000550457 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
CCNT1-203ENST00000550457 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
CCNT1-203ENST00000550457 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
CCNT1-203ENST00000550457 SGIP1Q9BQI5 828 aa9.74□□□□□ -0.85
CCNT1-203ENST00000550457 IFNL1Q8IU54 200 aa9.73□□□□□ -0.85
CCNT1-203ENST00000550457 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
CCNT1-203ENST00000550457 PYGBP11216 843 aa9.67□□□□□ -0.86
CCNT1-203ENST00000550457 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
CCNT1-203ENST00000550457 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
CCNT1-203ENST00000550457 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
CCNT1-203ENST00000550457 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
CCNT1-203ENST00000550457 PCDHB8Q9UN66 801 aa9.62□□□□□ -0.87
CCNT1-203ENST00000550457 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
CCNT1-203ENST00000550457 POTEMA6NI47 508 aa9.6□□□□□ -0.87
CCNT1-203ENST00000550457 IER5LQ5T953 404 aa9.6□□□□□ -0.87
CCNT1-203ENST00000550457 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
CCNT1-203ENST00000550457 SEC24BO95487 1268 aa9.59□□□□□ -0.87
CCNT1-203ENST00000550457 GSE1Q14687 1217 aa9.57□□□□□ -0.88
CCNT1-203ENST00000550457 SCUBE2Q9NQ36 999 aa9.57□□□□□ -0.88
CCNT1-203ENST00000550457 POTEGQ6S5H5 508 aa9.55□□□□□ -0.88
CCNT1-203ENST00000550457 CHRM1P11229 460 aaPredicted RBP9.53□□□□□ -0.88
CCNT1-203ENST00000550457 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
CCNT1-203ENST00000550457 SPOCK2Q92563 424 aa9.53□□□□□ -0.88
CCNT1-203ENST00000550457 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
CCNT1-203ENST00000550457 PLCG2P16885 1265 aa9.5□□□□□ -0.89
CCNT1-203ENST00000550457 ZNF467Q7Z7K2 595 aaPredicted RBP9.49□□□□□ -0.89
CCNT1-203ENST00000550457 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
CCNT1-203ENST00000550457 OCEL1Q9H607 264 aa9.46□□□□□ -0.9
CCNT1-203ENST00000550457 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.9
CCNT1-203ENST00000550457 PSEN1P49768 467 aa9.44□□□□□ -0.9
CCNT1-203ENST00000550457 PCDH10Q9P2E7 1040 aa9.44□□□□□ -0.9
CCNT1-203ENST00000550457 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
CCNT1-203ENST00000550457 SLAIN1Q8ND83 568 aa9.41□□□□□ -0.9
CCNT1-203ENST00000550457 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
CCNT1-203ENST00000550457 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
CCNT1-203ENST00000550457 GOLGA2Q08379 1002 aa9.36□□□□□ -0.91
CCNT1-203ENST00000550457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCNT1-203ENST00000550457 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
CCNT1-203ENST00000550457 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
CCNT1-203ENST00000550457 ST18O60284 1047 aa9.31□□□□□ -0.92
CCNT1-203ENST00000550457 DPY19L2Q6NUT2 758 aa9.31□□□□□ -0.92
CCNT1-203ENST00000550457 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
CCNT1-203ENST00000550457 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
CCNT1-203ENST00000550457 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
CCNT1-203ENST00000550457 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
CCNT1-203ENST00000550457 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
CCNT1-203ENST00000550457 EFCAB3Q8N7B9 438 aa9.24□□□□□ -0.93
CCNT1-203ENST00000550457 RIOK3O14730 519 aaKnown RBP9.22□□□□□ -0.93
CCNT1-203ENST00000550457 CDAN1Q8IWY9 1227 aa9.21□□□□□ -0.94
CCNT1-203ENST00000550457 SNPHO15079 494 aa9.2□□□□□ -0.94
CCNT1-203ENST00000550457 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
CCNT1-203ENST00000550457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.19□□□□□ -0.94
CCNT1-203ENST00000550457 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
CCNT1-203ENST00000550457 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
CCNT1-203ENST00000550457 MARVELD3Q96A59 401 aa9.17□□□□□ -0.94
CCNT1-203ENST00000550457 VGFO15240 615 aaPredicted RBP9.16□□□□□ -0.94
CCNT1-203ENST00000550457 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
CCNT1-203ENST00000550457 G3V3G9 751 aa9.13□□□□□ -0.95
CCNT1-203ENST00000550457 PHF8Q9UPP1 1060 aa9.12□□□□□ -0.95
CCNT1-203ENST00000550457 SOX12O15370 315 aa9.11□□□□□ -0.95
CCNT1-203ENST00000550457 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
CCNT1-203ENST00000550457 TMEM92Q6UXU6 159 aa9.09□□□□□ -0.95
CCNT1-203ENST00000550457 MICALL2Q8IY33 904 aa9.09□□□□□ -0.95
CCNT1-203ENST00000550457 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
CCNT1-203ENST00000550457 EMP3P54852 163 aa9.08□□□□□ -0.96
CCNT1-203ENST00000550457 PKD2Q13563 968 aa9.08□□□□□ -0.96
CCNT1-203ENST00000550457 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
CCNT1-203ENST00000550457 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
CCNT1-203ENST00000550457 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
CCNT1-203ENST00000550457 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
CCNT1-203ENST00000550457 RGL2O15211 777 aa9.04□□□□□ -0.96
CCNT1-203ENST00000550457 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
CCNT1-203ENST00000550457 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
CCNT1-203ENST00000550457 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
CCNT1-203ENST00000550457 MFRPQ9BY79 579 aa9.02□□□□□ -0.97
CCNT1-203ENST00000550457 STK25O00506 426 aa9.01□□□□□ -0.97
CCNT1-203ENST00000550457 NLRP6P59044 892 aa9.01□□□□□ -0.97
CCNT1-203ENST00000550457 TAOK2Q9UL54 1235 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms