RNA–Protein interactions for RNA: ENST00000549344.5

PPFIA2-215, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2

Gene PPFIA2, Length 383 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-215ENST00000549344 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
PPFIA2-215ENST00000549344 NUBP1P53384 320 aa13.23□□□□□ -0.29
PPFIA2-215ENST00000549344 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
PPFIA2-215ENST00000549344 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
PPFIA2-215ENST00000549344 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
PPFIA2-215ENST00000549344 LHX8Q68G74 356 aa13.15□□□□□ -0.3
PPFIA2-215ENST00000549344 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
PPFIA2-215ENST00000549344 MAP3K13O43283 966 aa13.1□□□□□ -0.31
PPFIA2-215ENST00000549344 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
PPFIA2-215ENST00000549344 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
PPFIA2-215ENST00000549344 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
PPFIA2-215ENST00000549344 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
PPFIA2-215ENST00000549344 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
PPFIA2-215ENST00000549344 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
PPFIA2-215ENST00000549344 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
PPFIA2-215ENST00000549344 TIE1P35590 1138 aa13□□□□□ -0.33
PPFIA2-215ENST00000549344 BMP2KQ9NSY1 1161 aaPredicted RBP12.99□□□□□ -0.33
PPFIA2-215ENST00000549344 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
PPFIA2-215ENST00000549344 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
PPFIA2-215ENST00000549344 ATN1P54259 1190 aaPredicted RBP12.97□□□□□ -0.33
PPFIA2-215ENST00000549344 C7P10643 843 aa12.96□□□□□ -0.33
PPFIA2-215ENST00000549344 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
PPFIA2-215ENST00000549344 GSE1Q14687 1217 aa12.95□□□□□ -0.34
PPFIA2-215ENST00000549344 IFNL1Q8IU54 200 aa12.94□□□□□ -0.34
PPFIA2-215ENST00000549344 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
PPFIA2-215ENST00000549344 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
PPFIA2-215ENST00000549344 PYGBP11216 843 aa12.91□□□□□ -0.34
PPFIA2-215ENST00000549344 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
PPFIA2-215ENST00000549344 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
PPFIA2-215ENST00000549344 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
PPFIA2-215ENST00000549344 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
PPFIA2-215ENST00000549344 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
PPFIA2-215ENST00000549344 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
PPFIA2-215ENST00000549344 IER5LQ5T953 404 aa12.8□□□□□ -0.36
PPFIA2-215ENST00000549344 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
PPFIA2-215ENST00000549344 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
PPFIA2-215ENST00000549344 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
PPFIA2-215ENST00000549344 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
PPFIA2-215ENST00000549344 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
PPFIA2-215ENST00000549344 SEC24BO95487 1268 aa12.73□□□□□ -0.37
PPFIA2-215ENST00000549344 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
PPFIA2-215ENST00000549344 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
PPFIA2-215ENST00000549344 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
PPFIA2-215ENST00000549344 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
PPFIA2-215ENST00000549344 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
PPFIA2-215ENST00000549344 PSEN1P49768 467 aa12.64□□□□□ -0.39
PPFIA2-215ENST00000549344 PLCG2P16885 1265 aa12.63□□□□□ -0.39
PPFIA2-215ENST00000549344 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
PPFIA2-215ENST00000549344 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
PPFIA2-215ENST00000549344 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
PPFIA2-215ENST00000549344 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-215ENST00000549344 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
PPFIA2-215ENST00000549344 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-215ENST00000549344 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
PPFIA2-215ENST00000549344 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
PPFIA2-215ENST00000549344 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
PPFIA2-215ENST00000549344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
PPFIA2-215ENST00000549344 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
PPFIA2-215ENST00000549344 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
PPFIA2-215ENST00000549344 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
PPFIA2-215ENST00000549344 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
PPFIA2-215ENST00000549344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-215ENST00000549344 POTEMA6NI47 508 aa12.36□□□□□ -0.43
PPFIA2-215ENST00000549344 LCE2DQ5TA82 110 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-215ENST00000549344 FAM163AQ96GL9 167 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-215ENST00000549344 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-215ENST00000549344 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
PPFIA2-215ENST00000549344 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
PPFIA2-215ENST00000549344 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
PPFIA2-215ENST00000549344 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
PPFIA2-215ENST00000549344 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
PPFIA2-215ENST00000549344 PKD2Q13563 968 aa12.32□□□□□ -0.44
PPFIA2-215ENST00000549344 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
PPFIA2-215ENST00000549344 SOX12O15370 315 aa12.29□□□□□ -0.44
PPFIA2-215ENST00000549344 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
PPFIA2-215ENST00000549344 G3V3G9 751 aa12.26□□□□□ -0.45
PPFIA2-215ENST00000549344 SNPHO15079 494 aa12.24□□□□□ -0.45
PPFIA2-215ENST00000549344 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
PPFIA2-215ENST00000549344 RGL2O15211 777 aa12.22□□□□□ -0.45
PPFIA2-215ENST00000549344 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
PPFIA2-215ENST00000549344 ST18O60284 1047 aa12.21□□□□□ -0.45
PPFIA2-215ENST00000549344 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
PPFIA2-215ENST00000549344 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
PPFIA2-215ENST00000549344 STK25O00506 426 aa12.19□□□□□ -0.46
PPFIA2-215ENST00000549344 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
PPFIA2-215ENST00000549344 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
PPFIA2-215ENST00000549344 NLRP6P59044 892 aa12.16□□□□□ -0.46
PPFIA2-215ENST00000549344 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
PPFIA2-215ENST00000549344 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
PPFIA2-215ENST00000549344 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
PPFIA2-215ENST00000549344 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
PPFIA2-215ENST00000549344 TMEM92Q6UXU6 159 aa12.04□□□□□ -0.48
PPFIA2-215ENST00000549344 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
PPFIA2-215ENST00000549344 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
PPFIA2-215ENST00000549344 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
PPFIA2-215ENST00000549344 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
PPFIA2-215ENST00000549344 DOK7Q18PE1 504 aa12□□□□□ -0.49
PPFIA2-215ENST00000549344 EMP3P54852 163 aa11.96□□□□□ -0.49
PPFIA2-215ENST00000549344 ZNF710Q8N1W2 664 aa11.95□□□□□ -0.5
PPFIA2-215ENST00000549344 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms