RNA–Protein interactions for RNA: ENST00000548858.1

AC025260.1-201, humanhuman

BASIC

Gene AC025260.1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025260.1-201ENST00000548858 NUBP1P53384 320 aa10.12□□□□□ -0.79
AC025260.1-201ENST00000548858 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
AC025260.1-201ENST00000548858 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
AC025260.1-201ENST00000548858 GTPBP6O43824 516 aaPredicted RBP10.04□□□□□ -0.8
AC025260.1-201ENST00000548858 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
AC025260.1-201ENST00000548858 VGFO15240 615 aaPredicted RBP10.03□□□□□ -0.8
AC025260.1-201ENST00000548858 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
AC025260.1-201ENST00000548858 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
AC025260.1-201ENST00000548858 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
AC025260.1-201ENST00000548858 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
AC025260.1-201ENST00000548858 STK25O00506 426 aa9.99□□□□□ -0.81
AC025260.1-201ENST00000548858 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
AC025260.1-201ENST00000548858 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
AC025260.1-201ENST00000548858 AKT1S1Q96B36 256 aa9.97□□□□□ -0.81
AC025260.1-201ENST00000548858 CREBZFQ9NS37 354 aa9.97□□□□□ -0.81
AC025260.1-201ENST00000548858 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
AC025260.1-201ENST00000548858 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
AC025260.1-201ENST00000548858 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
AC025260.1-201ENST00000548858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
AC025260.1-201ENST00000548858 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
AC025260.1-201ENST00000548858 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
AC025260.1-201ENST00000548858 BCL11BQ9C0K0 894 aaPredicted RBP9.9□□□□□ -0.82
AC025260.1-201ENST00000548858 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
AC025260.1-201ENST00000548858 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
AC025260.1-201ENST00000548858 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
AC025260.1-201ENST00000548858 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
AC025260.1-201ENST00000548858 PYGBP11216 843 aa9.83□□□□□ -0.84
AC025260.1-201ENST00000548858 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.85
AC025260.1-201ENST00000548858 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
AC025260.1-201ENST00000548858 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
AC025260.1-201ENST00000548858 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
AC025260.1-201ENST00000548858 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
AC025260.1-201ENST00000548858 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
AC025260.1-201ENST00000548858 PDAP1Q13442 181 aaKnown RBP9.71□□□□□ -0.86
AC025260.1-201ENST00000548858 TIMELESSQ9UNS1 1208 aa9.71□□□□□ -0.86
AC025260.1-201ENST00000548858 KCNV2Q8TDN2 545 aa9.7□□□□□ -0.86
AC025260.1-201ENST00000548858 TULP1O00294 542 aaPredicted RBP9.69□□□□□ -0.86
AC025260.1-201ENST00000548858 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
AC025260.1-201ENST00000548858 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
AC025260.1-201ENST00000548858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.66□□□□□ -0.86
AC025260.1-201ENST00000548858 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
AC025260.1-201ENST00000548858 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
AC025260.1-201ENST00000548858 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
AC025260.1-201ENST00000548858 PSEN1P49768 467 aa9.61□□□□□ -0.87
AC025260.1-201ENST00000548858 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
AC025260.1-201ENST00000548858 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
AC025260.1-201ENST00000548858 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
AC025260.1-201ENST00000548858 PCDHB13Q9Y5F0 798 aa9.6□□□□□ -0.87
AC025260.1-201ENST00000548858 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
AC025260.1-201ENST00000548858 CHADLQ6NUI6 762 aa9.59□□□□□ -0.87
AC025260.1-201ENST00000548858 E2F4Q16254 413 aa9.55□□□□□ -0.88
AC025260.1-201ENST00000548858 SOX12O15370 315 aa9.54□□□□□ -0.88
AC025260.1-201ENST00000548858 NLRP6P59044 892 aa9.54□□□□□ -0.88
AC025260.1-201ENST00000548858 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
AC025260.1-201ENST00000548858 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
AC025260.1-201ENST00000548858 PPP1R37O75864 691 aa9.51□□□□□ -0.89
AC025260.1-201ENST00000548858 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
AC025260.1-201ENST00000548858 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
AC025260.1-201ENST00000548858 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
AC025260.1-201ENST00000548858 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
AC025260.1-201ENST00000548858 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
AC025260.1-201ENST00000548858 ARXQ96QS3 562 aa9.48□□□□□ -0.89
AC025260.1-201ENST00000548858 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
AC025260.1-201ENST00000548858 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
AC025260.1-201ENST00000548858 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
AC025260.1-201ENST00000548858 SEMA3EO15041 775 aa9.46□□□□□ -0.9
AC025260.1-201ENST00000548858 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
AC025260.1-201ENST00000548858 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
AC025260.1-201ENST00000548858 MAP3K13O43283 966 aa9.44□□□□□ -0.9
AC025260.1-201ENST00000548858 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
AC025260.1-201ENST00000548858 NCKAP5LQ9HCH0 1330 aa9.43□□□□□ -0.9
AC025260.1-201ENST00000548858 PDE4AP27815 886 aa9.43□□□□□ -0.9
AC025260.1-201ENST00000548858 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
AC025260.1-201ENST00000548858 MFSD10Q14728 455 aa9.43□□□□□ -0.9
AC025260.1-201ENST00000548858 SMYD5Q6GMV2 418 aa9.43□□□□□ -0.9
AC025260.1-201ENST00000548858 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
AC025260.1-201ENST00000548858 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
AC025260.1-201ENST00000548858 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
AC025260.1-201ENST00000548858 SLC24A3Q9HC58 644 aa9.4□□□□□ -0.9
AC025260.1-201ENST00000548858 ZMYND10O75800 440 aa9.39□□□□□ -0.91
AC025260.1-201ENST00000548858 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
AC025260.1-201ENST00000548858 MS4A4AQ96JQ5 239 aa9.37□□□□□ -0.91
AC025260.1-201ENST00000548858 CAMK2BQ13554 666 aa9.36□□□□□ -0.91
AC025260.1-201ENST00000548858 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
AC025260.1-201ENST00000548858 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
AC025260.1-201ENST00000548858 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
AC025260.1-201ENST00000548858 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
AC025260.1-201ENST00000548858 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
AC025260.1-201ENST00000548858 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
AC025260.1-201ENST00000548858 AK7Q96M32 723 aa9.27□□□□□ -0.93
AC025260.1-201ENST00000548858 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
AC025260.1-201ENST00000548858 MKRN3Q13064 507 aaKnown RBP9.25□□□□□ -0.93
AC025260.1-201ENST00000548858 GPIHBP1Q8IV16 184 aa9.25□□□□□ -0.93
AC025260.1-201ENST00000548858 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
AC025260.1-201ENST00000548858 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
AC025260.1-201ENST00000548858 PHF12Q96QT6 1004 aa9.24□□□□□ -0.93
AC025260.1-201ENST00000548858 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
AC025260.1-201ENST00000548858 ILDR1Q86SU0 546 aaPredicted RBP9.23□□□□□ -0.93
AC025260.1-201ENST00000548858 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
AC025260.1-201ENST00000548858 MLLT3P42568 568 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms