RNA–Protein interactions for RNA: ENST00000548512.1

LINC02424-201, Transcript of long intergenic non-protein coding RNA 2424, humanhuman

TSL 1 (best) BASIC

Gene LINC02424, Length 1,264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02424-201ENST00000548512 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
LINC02424-201ENST00000548512 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
LINC02424-201ENST00000548512 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
LINC02424-201ENST00000548512 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
LINC02424-201ENST00000548512 EVX2Q03828 476 aa18.03■□□□□ 0.48
LINC02424-201ENST00000548512 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
LINC02424-201ENST00000548512 HAX1O00165 279 aa18.01■□□□□ 0.47
LINC02424-201ENST00000548512 CHRM1P11229 460 aaPredicted RBP18.01■□□□□ 0.47
LINC02424-201ENST00000548512 PYGBP11216 843 aa17.99■□□□□ 0.47
LINC02424-201ENST00000548512 RGL2O15211 777 aa17.96■□□□□ 0.47
LINC02424-201ENST00000548512 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
LINC02424-201ENST00000548512 RNF25Q96BH1 459 aaPredicted RBP17.95■□□□□ 0.46
LINC02424-201ENST00000548512 PHF12Q96QT6 1004 aa17.92■□□□□ 0.46
LINC02424-201ENST00000548512 KIF12Q96FN5 646 aa17.9■□□□□ 0.46
LINC02424-201ENST00000548512 MAP3K13O43283 966 aa17.84■□□□□ 0.45
LINC02424-201ENST00000548512 SGIP1Q9BQI5 828 aa17.79■□□□□ 0.44
LINC02424-201ENST00000548512 RIOK3O14730 519 aaKnown RBP17.78■□□□□ 0.44
LINC02424-201ENST00000548512 PCDHB13Q9Y5F0 798 aa17.77■□□□□ 0.44
LINC02424-201ENST00000548512 IFNL1Q8IU54 200 aa17.75■□□□□ 0.43
LINC02424-201ENST00000548512 PCDHB8Q9UN66 801 aa17.75■□□□□ 0.43
LINC02424-201ENST00000548512 ZNF467Q7Z7K2 595 aaPredicted RBP17.72■□□□□ 0.43
LINC02424-201ENST00000548512 MS4A3Q96HJ5 214 aa17.72■□□□□ 0.43
LINC02424-201ENST00000548512 VGFO15240 615 aaPredicted RBP17.67■□□□□ 0.42
LINC02424-201ENST00000548512 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
LINC02424-201ENST00000548512 GALR2O43603 387 aaPredicted RBP17.65■□□□□ 0.42
LINC02424-201ENST00000548512 TRPC6Q9Y210 931 aa17.64■□□□□ 0.41
LINC02424-201ENST00000548512 CLCN6P51797 869 aa17.63■□□□□ 0.41
LINC02424-201ENST00000548512 GABBR2O75899 941 aa17.62■□□□□ 0.41
LINC02424-201ENST00000548512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
LINC02424-201ENST00000548512 PDAP1Q13442 181 aaKnown RBP17.6■□□□□ 0.41
LINC02424-201ENST00000548512 ZFP91Q96JP5 570 aaPredicted RBP17.6■□□□□ 0.41
LINC02424-201ENST00000548512 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
LINC02424-201ENST00000548512 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.4
LINC02424-201ENST00000548512 PSEN1P49768 467 aa17.56■□□□□ 0.4
LINC02424-201ENST00000548512 HS6ST3Q8IZP7 471 aa17.56■□□□□ 0.4
LINC02424-201ENST00000548512 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
LINC02424-201ENST00000548512 STK25O00506 426 aa17.49■□□□□ 0.39
LINC02424-201ENST00000548512 TIE1P35590 1138 aa17.48■□□□□ 0.39
LINC02424-201ENST00000548512 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
LINC02424-201ENST00000548512 BMP2KQ9NSY1 1161 aaPredicted RBP17.47■□□□□ 0.39
LINC02424-201ENST00000548512 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
LINC02424-201ENST00000548512 TTLL13PA6NNM8 815 aa17.43■□□□□ 0.38
LINC02424-201ENST00000548512 TMEM106CQ9BVX2 250 aa17.43■□□□□ 0.38
LINC02424-201ENST00000548512 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
LINC02424-201ENST00000548512 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
LINC02424-201ENST00000548512 NKX1-1Q15270 411 aaPredicted RBP17.37■□□□□ 0.37
LINC02424-201ENST00000548512 ASTLQ6HA08 431 aaPredicted RBP17.37■□□□□ 0.37
LINC02424-201ENST00000548512 ATMINO43313 823 aaPredicted RBP17.36■□□□□ 0.37
LINC02424-201ENST00000548512 CABP2Q9NPB3 220 aa17.34■□□□□ 0.37
LINC02424-201ENST00000548512 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
LINC02424-201ENST00000548512 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
LINC02424-201ENST00000548512 EFCAB3Q8N7B9 438 aa17.29■□□□□ 0.36
LINC02424-201ENST00000548512 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
LINC02424-201ENST00000548512 DCBLD2Q96PD2 775 aa17.27■□□□□ 0.36
LINC02424-201ENST00000548512 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
LINC02424-201ENST00000548512 MFRPQ9BY79 579 aa17.21■□□□□ 0.35
LINC02424-201ENST00000548512 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.2■□□□□ 0.34
LINC02424-201ENST00000548512 SOX12O15370 315 aa17.18■□□□□ 0.34
LINC02424-201ENST00000548512 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
LINC02424-201ENST00000548512 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
LINC02424-201ENST00000548512 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
LINC02424-201ENST00000548512 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
LINC02424-201ENST00000548512 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
LINC02424-201ENST00000548512 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
LINC02424-201ENST00000548512 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
LINC02424-201ENST00000548512 PAXIP1Q6ZW49 1069 aaPredicted RBP17.13■□□□□ 0.33
LINC02424-201ENST00000548512 IER5LQ5T953 404 aa17.11■□□□□ 0.33
LINC02424-201ENST00000548512 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
LINC02424-201ENST00000548512 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
LINC02424-201ENST00000548512 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
LINC02424-201ENST00000548512 NLRP6P59044 892 aa17.08■□□□□ 0.32
LINC02424-201ENST00000548512 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
LINC02424-201ENST00000548512 SLC39A7Q92504 469 aa17.06■□□□□ 0.32
LINC02424-201ENST00000548512 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
LINC02424-201ENST00000548512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
LINC02424-201ENST00000548512 PDCD7Q8N8D1 485 aaKnown RBP17.04■□□□□ 0.32
LINC02424-201ENST00000548512 C7P10643 843 aa17.02■□□□□ 0.32
LINC02424-201ENST00000548512 RYDENQ9NUL5 291 aaKnown RBP17.02■□□□□ 0.32
LINC02424-201ENST00000548512 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
LINC02424-201ENST00000548512 PPP1R37O75864 691 aa17■□□□□ 0.31
LINC02424-201ENST00000548512 METRNQ9UJH8 293 aa17■□□□□ 0.31
LINC02424-201ENST00000548512 OCEL1Q9H607 264 aa16.98■□□□□ 0.31
LINC02424-201ENST00000548512 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
LINC02424-201ENST00000548512 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
LINC02424-201ENST00000548512 PLCG2P16885 1265 aa16.92■□□□□ 0.3
LINC02424-201ENST00000548512 SEC24BO95487 1268 aa16.89■□□□□ 0.29
LINC02424-201ENST00000548512 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
LINC02424-201ENST00000548512 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
LINC02424-201ENST00000548512 TMEM121BQ9BXQ6 578 aaPredicted RBP16.8■□□□□ 0.28
LINC02424-201ENST00000548512 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
LINC02424-201ENST00000548512 MICALL2Q8IY33 904 aa16.78■□□□□ 0.28
LINC02424-201ENST00000548512 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.28
LINC02424-201ENST00000548512 BOLA1Q9Y3E2 137 aa16.77■□□□□ 0.28
LINC02424-201ENST00000548512 POTEJP0CG39 1038 aa16.75■□□□□ 0.27
LINC02424-201ENST00000548512 L3MBTL3Q96JM7 780 aaPredicted RBP16.74■□□□□ 0.27
LINC02424-201ENST00000548512 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
LINC02424-201ENST00000548512 NCKAP5LQ9HCH0 1330 aa16.63■□□□□ 0.25
LINC02424-201ENST00000548512 G3V3G9 751 aa16.61■□□□□ 0.25
LINC02424-201ENST00000548512 TMEM92Q6UXU6 159 aa16.61■□□□□ 0.25
LINC02424-201ENST00000548512 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms