RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 RNF25Q96BH1 459 aaPredicted RBP14.66□□□□□ -0.06
COPA-206ENST00000545266 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
COPA-206ENST00000545266 TSPYL2Q9H2G4 693 aaPredicted RBP14.61□□□□□ -0.07
COPA-206ENST00000545266 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
COPA-206ENST00000545266 RIOK3O14730 519 aaKnown RBP14.57□□□□□ -0.08
COPA-206ENST00000545266 PYGBP11216 843 aa14.56□□□□□ -0.08
COPA-206ENST00000545266 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
COPA-206ENST00000545266 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
COPA-206ENST00000545266 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
COPA-206ENST00000545266 TAOK2Q9UL54 1235 aa14.51□□□□□ -0.09
COPA-206ENST00000545266 BBXQ8WY36 941 aaPredicted RBP14.5□□□□□ -0.09
COPA-206ENST00000545266 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
COPA-206ENST00000545266 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
COPA-206ENST00000545266 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
COPA-206ENST00000545266 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
COPA-206ENST00000545266 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
COPA-206ENST00000545266 ZNF467Q7Z7K2 595 aaPredicted RBP14.45□□□□□ -0.1
COPA-206ENST00000545266 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
COPA-206ENST00000545266 CHGAP10645 457 aaKnown RBP14.44□□□□□ -0.1
COPA-206ENST00000545266 PLCB2Q00722 1185 aa14.44□□□□□ -0.1
COPA-206ENST00000545266 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
COPA-206ENST00000545266 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
COPA-206ENST00000545266 MAP3K13O43283 966 aa14.38□□□□□ -0.11
COPA-206ENST00000545266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
COPA-206ENST00000545266 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
COPA-206ENST00000545266 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
COPA-206ENST00000545266 PCDHB8Q9UN66 801 aa14.36□□□□□ -0.11
COPA-206ENST00000545266 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
COPA-206ENST00000545266 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
COPA-206ENST00000545266 PDAP1Q13442 181 aaKnown RBP14.34□□□□□ -0.11
COPA-206ENST00000545266 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
COPA-206ENST00000545266 STK25O00506 426 aa14.32□□□□□ -0.12
COPA-206ENST00000545266 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
COPA-206ENST00000545266 NKX1-1Q15270 411 aaPredicted RBP14.28□□□□□ -0.12
COPA-206ENST00000545266 PSEN1P49768 467 aa14.27□□□□□ -0.13
COPA-206ENST00000545266 HAX1O00165 279 aa14.26□□□□□ -0.13
COPA-206ENST00000545266 EVX2Q03828 476 aa14.25□□□□□ -0.13
COPA-206ENST00000545266 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
COPA-206ENST00000545266 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
COPA-206ENST00000545266 CLCN6P51797 869 aa14.23□□□□□ -0.13
COPA-206ENST00000545266 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
COPA-206ENST00000545266 POTEHQ6S545 545 aa14.21□□□□□ -0.13
COPA-206ENST00000545266 MS4A3Q96HJ5 214 aa14.2□□□□□ -0.14
COPA-206ENST00000545266 GTPBP6O43824 516 aaPredicted RBP14.17□□□□□ -0.14
COPA-206ENST00000545266 CFAP44Q96MT7 982 aa14.15□□□□□ -0.14
COPA-206ENST00000545266 RYDENQ9NUL5 291 aaKnown RBP14.11□□□□□ -0.15
COPA-206ENST00000545266 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
COPA-206ENST00000545266 TIE1P35590 1138 aa14.1□□□□□ -0.15
COPA-206ENST00000545266 HAP1P54257 671 aaPredicted RBP14.1□□□□□ -0.15
COPA-206ENST00000545266 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
COPA-206ENST00000545266 TMEM106CQ9BVX2 250 aa14.06□□□□□ -0.16
COPA-206ENST00000545266 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
COPA-206ENST00000545266 SOX12O15370 315 aa14.04□□□□□ -0.16
COPA-206ENST00000545266 VSIG10Q8N0Z9 540 aa14.04□□□□□ -0.16
COPA-206ENST00000545266 MFRPQ9BY79 579 aa14.04□□□□□ -0.16
COPA-206ENST00000545266 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
COPA-206ENST00000545266 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.17
COPA-206ENST00000545266 TSHZ2Q9NRE2 1034 aa14.02□□□□□ -0.17
COPA-206ENST00000545266 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
COPA-206ENST00000545266 FBXO22Q8NEZ5 403 aa14.01□□□□□ -0.17
COPA-206ENST00000545266 GABBR2O75899 941 aa13.99□□□□□ -0.17
COPA-206ENST00000545266 NLRP6P59044 892 aa13.96□□□□□ -0.17
COPA-206ENST00000545266 ILDR1Q86SU0 546 aaPredicted RBP13.96□□□□□ -0.17
COPA-206ENST00000545266 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
COPA-206ENST00000545266 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
COPA-206ENST00000545266 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
COPA-206ENST00000545266 ATMINO43313 823 aaPredicted RBP13.91□□□□□ -0.18
COPA-206ENST00000545266 GOLGA2Q08379 1002 aa13.9□□□□□ -0.18
COPA-206ENST00000545266 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
COPA-206ENST00000545266 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
COPA-206ENST00000545266 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
COPA-206ENST00000545266 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
COPA-206ENST00000545266 PPP1R37O75864 691 aa13.85□□□□□ -0.19
COPA-206ENST00000545266 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
COPA-206ENST00000545266 IER5LQ5T953 404 aa13.83□□□□□ -0.2
COPA-206ENST00000545266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.2
COPA-206ENST00000545266 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
COPA-206ENST00000545266 CADPS2Q86UW7 1296 aa13.76□□□□□ -0.21
COPA-206ENST00000545266 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
COPA-206ENST00000545266 DCBLD2Q96PD2 775 aa13.76□□□□□ -0.21
COPA-206ENST00000545266 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
COPA-206ENST00000545266 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
COPA-206ENST00000545266 OCEL1Q9H607 264 aa13.72□□□□□ -0.21
COPA-206ENST00000545266 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
COPA-206ENST00000545266 C7P10643 843 aa13.66□□□□□ -0.22
COPA-206ENST00000545266 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
COPA-206ENST00000545266 TMEM121BQ9BXQ6 578 aaPredicted RBP13.65□□□□□ -0.22
COPA-206ENST00000545266 COLQQ9Y215 455 aaPredicted RBP13.62□□□□□ -0.23
COPA-206ENST00000545266 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
COPA-206ENST00000545266 POTEFA5A3E0 1075 aa13.61□□□□□ -0.23
COPA-206ENST00000545266 PLCG2P16885 1265 aa13.61□□□□□ -0.23
COPA-206ENST00000545266 CRISPLD2Q9H0B8 497 aa13.61□□□□□ -0.23
COPA-206ENST00000545266 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
COPA-206ENST00000545266 MFSD10Q14728 455 aa13.57□□□□□ -0.24
COPA-206ENST00000545266 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
COPA-206ENST00000545266 PDE4AP27815 886 aa13.56□□□□□ -0.24
COPA-206ENST00000545266 BOLA1Q9Y3E2 137 aa13.56□□□□□ -0.24
COPA-206ENST00000545266 SEC24BO95487 1268 aa13.55□□□□□ -0.24
COPA-206ENST00000545266 BCANQ96GW7 911 aa13.55□□□□□ -0.24
COPA-206ENST00000545266 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms