RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 TRIM44Q96DX7 344 aaPredicted RBP26.55■■□□□ 1.84
BPTF-208ENST00000544778 NPHP1O15259 732 aa26.52■■□□□ 1.84
BPTF-208ENST00000544778 IRX6P78412 446 aaPredicted RBP26.51■■□□□ 1.83
BPTF-208ENST00000544778 PPP1R15AO75807 674 aaPredicted RBP26.5■■□□□ 1.83
BPTF-208ENST00000544778 PTMAP06454 111 aaKnown RBP26.45■■□□□ 1.82
BPTF-208ENST00000544778 DNTTIP2Q5QJE6 756 aaKnown RBP26.42■■□□□ 1.82
BPTF-208ENST00000544778 MRS2Q9HD23 443 aa26.42■■□□□ 1.82
BPTF-208ENST00000544778 BECN1Q14457 450 aa26.42■■□□□ 1.82
BPTF-208ENST00000544778 GOLGA6L22H0YM25 854 aa26.4■■□□□ 1.82
BPTF-208ENST00000544778 PPM1GO15355 546 aaPredicted RBP26.36■■□□□ 1.81
BPTF-208ENST00000544778 CASC1Q6TDU7 716 aa26.36■■□□□ 1.81
BPTF-208ENST00000544778 TNNT2P45379 298 aaPredicted RBP26.34■■□□□ 1.81
BPTF-208ENST00000544778 ARID4BQ4LE39 1312 aaPredicted RBP26.33■■□□□ 1.81
BPTF-208ENST00000544778 CSRNP3Q8WYN3 585 aa26.33■■□□□ 1.81
BPTF-208ENST00000544778 TSPY4P0CV99 314 aa26.32■■□□□ 1.8
BPTF-208ENST00000544778 TSPY10P0CW01 314 aa26.32■■□□□ 1.8
BPTF-208ENST00000544778 CLSTN1O94985 981 aa26.31■■□□□ 1.8
BPTF-208ENST00000544778 LAS1LQ9Y4W2 734 aaKnown RBP26.3■■□□□ 1.8
BPTF-208ENST00000544778 DDRGK1Q96HY6 314 aa26.28■■□□□ 1.8
BPTF-208ENST00000544778 LMOD2Q6P5Q4 547 aa26.28■■□□□ 1.8
BPTF-208ENST00000544778 HIRIP3Q9BW71 556 aaPredicted RBP26.27■■□□□ 1.8
BPTF-208ENST00000544778 PLCB2Q00722 1185 aa26.25■■□□□ 1.79
BPTF-208ENST00000544778 SENP3-EIF4A1A0A087X0R7 540 aa26.24■■□□□ 1.79
BPTF-208ENST00000544778 NAP1L2Q9ULW6 460 aaPredicted RBP26.23■■□□□ 1.79
BPTF-208ENST00000544778 FTSJ3Q8IY81 847 aaKnown RBP26.21■■□□□ 1.79
BPTF-208ENST00000544778 GOLGA2Q08379 1002 aa26.19■■□□□ 1.78
BPTF-208ENST00000544778 KCNH8Q96L42 1107 aa26.17■■□□□ 1.78
BPTF-208ENST00000544778 ANP32EQ9BTT0 268 aa26.17■■□□□ 1.78
BPTF-208ENST00000544778 FGD1P98174 961 aa26.15■■□□□ 1.78
BPTF-208ENST00000544778 OS9Q13438 667 aaPredicted RBP26.13■■□□□ 1.77
BPTF-208ENST00000544778 CFAP53Q96M91 514 aa26.13■■□□□ 1.77
BPTF-208ENST00000544778 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
BPTF-208ENST00000544778 GOLGA6L6A8MZA4 724 aa26.1■■□□□ 1.77
BPTF-208ENST00000544778 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
BPTF-208ENST00000544778 ISY1Q9ULR0 285 aaKnown RBP26.08■■□□□ 1.76
BPTF-208ENST00000544778 NEUROD2Q15784 382 aa26.07■■□□□ 1.76
BPTF-208ENST00000544778 KCNJ4P48050 445 aa26.05■■□□□ 1.76
BPTF-208ENST00000544778 NAP1L5Q96NT1 182 aaPredicted RBP26.04■■□□□ 1.76
BPTF-208ENST00000544778 RRP7BPQ9NSQ0 103 aa26.03■■□□□ 1.76
BPTF-208ENST00000544778 MTUS2Q5JR59 1369 aa26.02■■□□□ 1.76
BPTF-208ENST00000544778 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.75
BPTF-208ENST00000544778 MAPK8IP3Q9UPT6 1336 aa25.99■■□□□ 1.75
BPTF-208ENST00000544778 KNSTRNQ9Y448 316 aa25.98■■□□□ 1.75
BPTF-208ENST00000544778 HSP90AB1P08238 724 aaKnown RBP25.97■■□□□ 1.75
BPTF-208ENST00000544778 PRM3Q9NNZ6 103 aa25.94■■□□□ 1.74
BPTF-208ENST00000544778 AMER1Q5JTC6 1135 aaPredicted RBP25.92■■□□□ 1.74
BPTF-208ENST00000544778 FRAT1Q92837 279 aaPredicted RBP25.92■■□□□ 1.74
BPTF-208ENST00000544778 POGKQ9P215 609 aa25.91■■□□□ 1.74
BPTF-208ENST00000544778 NRDCO43847 1150 aa25.89■■□□□ 1.73
BPTF-208ENST00000544778 RTN4Q9NQC3 1192 aaKnown RBP25.88■■□□□ 1.73
BPTF-208ENST00000544778 GOLGA6L4A6NEF3 574 aa25.87■■□□□ 1.73
BPTF-208ENST00000544778 RGS3P49796 1198 aa25.87■■□□□ 1.73
BPTF-208ENST00000544778 DRC7Q8IY82 874 aa25.85■■□□□ 1.73
BPTF-208ENST00000544778 NUDCQ9Y266 331 aa25.83■■□□□ 1.73
BPTF-208ENST00000544778 SOX12O15370 315 aa25.83■■□□□ 1.73
BPTF-208ENST00000544778 CDCA8Q53HL2 280 aa25.82■■□□□ 1.72
BPTF-208ENST00000544778 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
BPTF-208ENST00000544778 MIER1Q8N108 512 aa25.82■■□□□ 1.72
BPTF-208ENST00000544778 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
BPTF-208ENST00000544778 GNL2Q13823 731 aaKnown RBP25.79■■□□□ 1.72
BPTF-208ENST00000544778 CHAF1AQ13111 956 aaPredicted RBP25.77■■□□□ 1.72
BPTF-208ENST00000544778 ERICH6BQ5W0A0 696 aa25.77■■□□□ 1.72
BPTF-208ENST00000544778 KIAA2012Q0VF49 1180 aa25.74■■□□□ 1.71
BPTF-208ENST00000544778 NOC3LQ8WTT2 800 aaKnown RBP25.74■■□□□ 1.71
BPTF-208ENST00000544778 SUPT16HQ9Y5B9 1047 aaKnown RBP25.74■■□□□ 1.71
BPTF-208ENST00000544778 CC2D1BQ5T0F9 858 aaKnown RBP25.73■■□□□ 1.71
BPTF-208ENST00000544778 PLEKHD1A6NEE1 506 aa25.73■■□□□ 1.71
BPTF-208ENST00000544778 PNNQ9H307 717 aaKnown RBP25.73■■□□□ 1.71
BPTF-208ENST00000544778 CARD11Q9BXL7 1154 aa25.72■■□□□ 1.71
BPTF-208ENST00000544778 SPRYD3Q8NCJ5 442 aa25.72■■□□□ 1.71
BPTF-208ENST00000544778 CHMP4BQ9H444 224 aaKnown RBP25.69■■□□□ 1.7
BPTF-208ENST00000544778 PDE4CQ08493 712 aa25.69■■□□□ 1.7
BPTF-208ENST00000544778 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
BPTF-208ENST00000544778 L1TD1Q5T7N2 865 aaKnown RBP25.67■■□□□ 1.7
BPTF-208ENST00000544778 MCCP23508 829 aa25.65■■□□□ 1.7
BPTF-208ENST00000544778 HSCBQ8IWL3 235 aa25.65■■□□□ 1.7
BPTF-208ENST00000544778 MSNP26038 577 aaKnown RBP25.64■■□□□ 1.69
BPTF-208ENST00000544778 ZNF330Q9Y3S2 320 aaPredicted RBP25.63■■□□□ 1.69
BPTF-208ENST00000544778 MLECQ14165 292 aa25.6■■□□□ 1.69
BPTF-208ENST00000544778 TMX4Q9H1E5 349 aaPredicted RBP25.6■■□□□ 1.69
BPTF-208ENST00000544778 MS4A1P11836 297 aa25.58■■□□□ 1.69
BPTF-208ENST00000544778 APBB1O00213 710 aa25.57■■□□□ 1.68
BPTF-208ENST00000544778 RTF1Q92541 710 aaKnown RBP25.55■■□□□ 1.68
BPTF-208ENST00000544778 ANO8Q9HCE9 1232 aaPredicted RBP25.54■■□□□ 1.68
BPTF-208ENST00000544778 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
BPTF-208ENST00000544778 SRPK2P78362 688 aaKnown RBP25.52■■□□□ 1.68
BPTF-208ENST00000544778 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
BPTF-208ENST00000544778 SAFB2Q14151 953 aaKnown RBP eCLIP25.52■■□□□ 1.68
BPTF-208ENST00000544778 PAK3O75914 559 aaPredicted RBP25.5■■□□□ 1.67
BPTF-208ENST00000544778 NOP58Q9Y2X3 529 aaKnown RBP25.5■■□□□ 1.67
BPTF-208ENST00000544778 A0A0U1RQG5 324 aaPredicted RBP25.5■■□□□ 1.67
BPTF-208ENST00000544778 KIAA1211Q6ZU35 1233 aa25.49■■□□□ 1.67
BPTF-208ENST00000544778 ARID3AQ99856 593 aa25.48■■□□□ 1.67
BPTF-208ENST00000544778 CCDC9Q9Y3X0 531 aaKnown RBP25.47■■□□□ 1.67
BPTF-208ENST00000544778 G3V3G9 751 aa25.47■■□□□ 1.67
BPTF-208ENST00000544778 DCAF8Q5TAQ9 597 aa25.47■■□□□ 1.67
BPTF-208ENST00000544778 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.67
BPTF-208ENST00000544778 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.45■■□□□ 1.66
BPTF-208ENST00000544778 CSB-PGBD3P0DP91 1061 aa25.44■■□□□ 1.66
BPTF-208ENST00000544778 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms