RNA–Protein interactions for RNA: ENST00000543702.1

SMG1P4-206, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-206ENST00000543702 PLCB2Q00722 1185 aa15.4■□□□□ 0.06
SMG1P4-206ENST00000543702 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
SMG1P4-206ENST00000543702 TSPYL2Q9H2G4 693 aaPredicted RBP15.38■□□□□ 0.05
SMG1P4-206ENST00000543702 CHGAP10645 457 aaKnown RBP15.37■□□□□ 0.05
SMG1P4-206ENST00000543702 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
SMG1P4-206ENST00000543702 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
SMG1P4-206ENST00000543702 PYGBP11216 843 aa15.35■□□□□ 0.05
SMG1P4-206ENST00000543702 RNF25Q96BH1 459 aaPredicted RBP15.35■□□□□ 0.05
SMG1P4-206ENST00000543702 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
SMG1P4-206ENST00000543702 CHRM1P11229 460 aaPredicted RBP15.32■□□□□ 0.04
SMG1P4-206ENST00000543702 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
SMG1P4-206ENST00000543702 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
SMG1P4-206ENST00000543702 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
SMG1P4-206ENST00000543702 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
SMG1P4-206ENST00000543702 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
SMG1P4-206ENST00000543702 VGFO15240 615 aaPredicted RBP15.22■□□□□ 0.03
SMG1P4-206ENST00000543702 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
SMG1P4-206ENST00000543702 STK25O00506 426 aa15.17■□□□□ 0.02
SMG1P4-206ENST00000543702 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
SMG1P4-206ENST00000543702 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
SMG1P4-206ENST00000543702 ZNF467Q7Z7K2 595 aaPredicted RBP15.13■□□□□ 0.01
SMG1P4-206ENST00000543702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
SMG1P4-206ENST00000543702 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
SMG1P4-206ENST00000543702 STK24Q9Y6E0 443 aa15.1■□□□□ 0.01
SMG1P4-206ENST00000543702 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
SMG1P4-206ENST00000543702 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
SMG1P4-206ENST00000543702 SGIP1Q9BQI5 828 aa15.08■□□□□ 0
SMG1P4-206ENST00000543702 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
SMG1P4-206ENST00000543702 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
SMG1P4-206ENST00000543702 PCDHB13Q9Y5F0 798 aa15.08■□□□□ 0
SMG1P4-206ENST00000543702 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
SMG1P4-206ENST00000543702 PDAP1Q13442 181 aaKnown RBP15.02■□□□□ -0
SMG1P4-206ENST00000543702 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
SMG1P4-206ENST00000543702 MAP3K13O43283 966 aa15.01□□□□□ -0.01
SMG1P4-206ENST00000543702 KIF12Q96FN5 646 aa15.01□□□□□ -0.01
SMG1P4-206ENST00000543702 NKX1-1Q15270 411 aaPredicted RBP14.99□□□□□ -0.01
SMG1P4-206ENST00000543702 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
SMG1P4-206ENST00000543702 PSEN1P49768 467 aa14.96□□□□□ -0.01
SMG1P4-206ENST00000543702 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
SMG1P4-206ENST00000543702 VSIG10Q8N0Z9 540 aa14.95□□□□□ -0.02
SMG1P4-206ENST00000543702 C19orf67A6NJJ6 358 aa14.93□□□□□ -0.02
SMG1P4-206ENST00000543702 TSHZ2Q9NRE2 1034 aa14.92□□□□□ -0.02
SMG1P4-206ENST00000543702 GTPBP6O43824 516 aaPredicted RBP14.89□□□□□ -0.03
SMG1P4-206ENST00000543702 RYDENQ9NUL5 291 aaKnown RBP14.88□□□□□ -0.03
SMG1P4-206ENST00000543702 HAX1O00165 279 aa14.85□□□□□ -0.03
SMG1P4-206ENST00000543702 KDM2AQ9Y2K7 1162 aa14.82□□□□□ -0.04
SMG1P4-206ENST00000543702 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
SMG1P4-206ENST00000543702 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
SMG1P4-206ENST00000543702 EFCAB3Q8N7B9 438 aa14.75□□□□□ -0.05
SMG1P4-206ENST00000543702 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
SMG1P4-206ENST00000543702 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
SMG1P4-206ENST00000543702 TRPC6Q9Y210 931 aa14.71□□□□□ -0.05
SMG1P4-206ENST00000543702 MFRPQ9BY79 579 aa14.7□□□□□ -0.06
SMG1P4-206ENST00000543702 SOX12O15370 315 aa14.68□□□□□ -0.06
SMG1P4-206ENST00000543702 EVX2Q03828 476 aa14.67□□□□□ -0.06
SMG1P4-206ENST00000543702 NLRP6P59044 892 aa14.66□□□□□ -0.06
SMG1P4-206ENST00000543702 PHF8Q9UPP1 1060 aa14.65□□□□□ -0.06
SMG1P4-206ENST00000543702 GALR2O43603 387 aaPredicted RBP14.63□□□□□ -0.07
SMG1P4-206ENST00000543702 TIE1P35590 1138 aa14.62□□□□□ -0.07
SMG1P4-206ENST00000543702 CLCN6P51797 869 aa14.61□□□□□ -0.07
SMG1P4-206ENST00000543702 MKRN3Q13064 507 aaKnown RBP14.61□□□□□ -0.07
SMG1P4-206ENST00000543702 BCANQ96GW7 911 aa14.61□□□□□ -0.07
SMG1P4-206ENST00000543702 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
SMG1P4-206ENST00000543702 FBXO22Q8NEZ5 403 aa14.58□□□□□ -0.08
SMG1P4-206ENST00000543702 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
SMG1P4-206ENST00000543702 PPP1R37O75864 691 aa14.55□□□□□ -0.08
SMG1P4-206ENST00000543702 POTEHQ6S545 545 aa14.54□□□□□ -0.08
SMG1P4-206ENST00000543702 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
SMG1P4-206ENST00000543702 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
SMG1P4-206ENST00000543702 MS4A4AQ96JQ5 239 aa14.47□□□□□ -0.09
SMG1P4-206ENST00000543702 WDR70Q9NW82 654 aa14.47□□□□□ -0.09
SMG1P4-206ENST00000543702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.09
SMG1P4-206ENST00000543702 GABBR2O75899 941 aa14.44□□□□□ -0.1
SMG1P4-206ENST00000543702 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
SMG1P4-206ENST00000543702 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
SMG1P4-206ENST00000543702 NBR1Q14596 966 aa14.4□□□□□ -0.1
SMG1P4-206ENST00000543702 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
SMG1P4-206ENST00000543702 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
SMG1P4-206ENST00000543702 ILDR1Q86SU0 546 aaPredicted RBP14.33□□□□□ -0.12
SMG1P4-206ENST00000543702 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
SMG1P4-206ENST00000543702 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
SMG1P4-206ENST00000543702 PDE4AP27815 886 aa14.3□□□□□ -0.12
SMG1P4-206ENST00000543702 IER5LQ5T953 404 aa14.3□□□□□ -0.12
SMG1P4-206ENST00000543702 OCEL1Q9H607 264 aa14.29□□□□□ -0.12
SMG1P4-206ENST00000543702 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
SMG1P4-206ENST00000543702 PLCG2P16885 1265 aa14.27□□□□□ -0.13
SMG1P4-206ENST00000543702 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
SMG1P4-206ENST00000543702 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
SMG1P4-206ENST00000543702 NCKAP5LQ9HCH0 1330 aa14.26□□□□□ -0.13
SMG1P4-206ENST00000543702 G3V3G9 751 aa14.25□□□□□ -0.13
SMG1P4-206ENST00000543702 SEC24BO95487 1268 aa14.24□□□□□ -0.13
SMG1P4-206ENST00000543702 KCNV2Q8TDN2 545 aa14.24□□□□□ -0.13
SMG1P4-206ENST00000543702 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
SMG1P4-206ENST00000543702 E2F4Q16254 413 aa14.21□□□□□ -0.13
SMG1P4-206ENST00000543702 MICALL2Q8IY33 904 aa14.21□□□□□ -0.13
SMG1P4-206ENST00000543702 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
SMG1P4-206ENST00000543702 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
SMG1P4-206ENST00000543702 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
SMG1P4-206ENST00000543702 BOLA1Q9Y3E2 137 aa14.19□□□□□ -0.14
SMG1P4-206ENST00000543702 SLC39A7Q92504 469 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms