RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 LHX8Q68G74 356 aa9.94□□□□□ -0.82
MRPL48-211ENST00000543058 NUBP1P53384 320 aa9.93□□□□□ -0.82
MRPL48-211ENST00000543058 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
MRPL48-211ENST00000543058 KIF12Q96FN5 646 aa9.92□□□□□ -0.82
MRPL48-211ENST00000543058 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
MRPL48-211ENST00000543058 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
MRPL48-211ENST00000543058 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
MRPL48-211ENST00000543058 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
MRPL48-211ENST00000543058 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
MRPL48-211ENST00000543058 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
MRPL48-211ENST00000543058 MAP3K13O43283 966 aa9.82□□□□□ -0.84
MRPL48-211ENST00000543058 FAM212AQ96EL1 285 aa9.8□□□□□ -0.84
MRPL48-211ENST00000543058 TIE1P35590 1138 aa9.79□□□□□ -0.84
MRPL48-211ENST00000543058 C7P10643 843 aa9.77□□□□□ -0.85
MRPL48-211ENST00000543058 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
MRPL48-211ENST00000543058 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
MRPL48-211ENST00000543058 TRPC6Q9Y210 931 aa9.76□□□□□ -0.85
MRPL48-211ENST00000543058 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
MRPL48-211ENST00000543058 ATN1P54259 1190 aaPredicted RBP9.75□□□□□ -0.85
MRPL48-211ENST00000543058 METRNQ9UJH8 293 aa9.73□□□□□ -0.85
MRPL48-211ENST00000543058 PCDHB13Q9Y5F0 798 aa9.72□□□□□ -0.85
MRPL48-211ENST00000543058 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
MRPL48-211ENST00000543058 IFNL1Q8IU54 200 aa9.7□□□□□ -0.86
MRPL48-211ENST00000543058 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
MRPL48-211ENST00000543058 IFNLR1Q8IU57 520 aaPredicted RBP9.67□□□□□ -0.86
MRPL48-211ENST00000543058 POTEFA5A3E0 1075 aa9.66□□□□□ -0.86
MRPL48-211ENST00000543058 POTEJP0CG39 1038 aa9.66□□□□□ -0.86
MRPL48-211ENST00000543058 CHRM1P11229 460 aaPredicted RBP9.66□□□□□ -0.86
MRPL48-211ENST00000543058 GSE1Q14687 1217 aa9.66□□□□□ -0.86
MRPL48-211ENST00000543058 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
MRPL48-211ENST00000543058 IER5LQ5T953 404 aa9.65□□□□□ -0.86
MRPL48-211ENST00000543058 KLHL34Q8N239 644 aa9.65□□□□□ -0.86
MRPL48-211ENST00000543058 PYGBP11216 843 aa9.62□□□□□ -0.87
MRPL48-211ENST00000543058 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
MRPL48-211ENST00000543058 SPOCK2Q92563 424 aa9.61□□□□□ -0.87
MRPL48-211ENST00000543058 MAMSTRQ6ZN01 415 aa9.59□□□□□ -0.87
MRPL48-211ENST00000543058 TMEM106CQ9BVX2 250 aa9.59□□□□□ -0.87
MRPL48-211ENST00000543058 COLQQ9Y215 455 aaPredicted RBP9.57□□□□□ -0.88
MRPL48-211ENST00000543058 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
MRPL48-211ENST00000543058 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
MRPL48-211ENST00000543058 IRX5P78411 483 aaPredicted RBP9.54□□□□□ -0.88
MRPL48-211ENST00000543058 SEC24BO95487 1268 aa9.51□□□□□ -0.89
MRPL48-211ENST00000543058 SCUBE2Q9NQ36 999 aa9.51□□□□□ -0.89
MRPL48-211ENST00000543058 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
MRPL48-211ENST00000543058 OCEL1Q9H607 264 aa9.46□□□□□ -0.9
MRPL48-211ENST00000543058 PSEN1P49768 467 aa9.45□□□□□ -0.9
MRPL48-211ENST00000543058 ILDR1Q86SU0 546 aaPredicted RBP9.45□□□□□ -0.9
MRPL48-211ENST00000543058 PLCG2P16885 1265 aa9.44□□□□□ -0.9
MRPL48-211ENST00000543058 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
MRPL48-211ENST00000543058 CIZ1Q9ULV3 898 aaPredicted RBP9.44□□□□□ -0.9
MRPL48-211ENST00000543058 PDCD7Q8N8D1 485 aaKnown RBP9.42□□□□□ -0.9
MRPL48-211ENST00000543058 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
MRPL48-211ENST00000543058 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
MRPL48-211ENST00000543058 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
MRPL48-211ENST00000543058 POTEMA6NI47 508 aa9.33□□□□□ -0.92
MRPL48-211ENST00000543058 RNF25Q96BH1 459 aaPredicted RBP9.33□□□□□ -0.92
MRPL48-211ENST00000543058 POTEGQ6S5H5 508 aa9.31□□□□□ -0.92
MRPL48-211ENST00000543058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.92
MRPL48-211ENST00000543058 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
MRPL48-211ENST00000543058 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
MRPL48-211ENST00000543058 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
MRPL48-211ENST00000543058 CABP2Q9NPB3 220 aa9.29□□□□□ -0.92
MRPL48-211ENST00000543058 PCDH10Q9P2E7 1040 aa9.28□□□□□ -0.92
MRPL48-211ENST00000543058 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
MRPL48-211ENST00000543058 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
MRPL48-211ENST00000543058 FAM163AQ96GL9 167 aaPredicted RBP9.26□□□□□ -0.93
MRPL48-211ENST00000543058 TMEM121BQ9BXQ6 578 aaPredicted RBP9.23□□□□□ -0.93
MRPL48-211ENST00000543058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.22□□□□□ -0.93
MRPL48-211ENST00000543058 DPY19L2Q6NUT2 758 aa9.22□□□□□ -0.93
MRPL48-211ENST00000543058 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
MRPL48-211ENST00000543058 ZFP91Q96JP5 570 aaPredicted RBP9.22□□□□□ -0.93
MRPL48-211ENST00000543058 C3orf67Q6ZVT6 689 aa9.21□□□□□ -0.94
MRPL48-211ENST00000543058 SNPHO15079 494 aa9.2□□□□□ -0.94
MRPL48-211ENST00000543058 SOX12O15370 315 aa9.2□□□□□ -0.94
MRPL48-211ENST00000543058 ST18O60284 1047 aa9.2□□□□□ -0.94
MRPL48-211ENST00000543058 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
MRPL48-211ENST00000543058 PKD2Q13563 968 aa9.19□□□□□ -0.94
MRPL48-211ENST00000543058 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
MRPL48-211ENST00000543058 MS4A4AQ96JQ5 239 aa9.15□□□□□ -0.94
MRPL48-211ENST00000543058 ECM2O94769 699 aaPredicted RBP9.13□□□□□ -0.95
MRPL48-211ENST00000543058 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
MRPL48-211ENST00000543058 BCL11BQ9C0K0 894 aaPredicted RBP9.11□□□□□ -0.95
MRPL48-211ENST00000543058 G3V3G9 751 aa9.1□□□□□ -0.95
MRPL48-211ENST00000543058 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
MRPL48-211ENST00000543058 PHF8Q9UPP1 1060 aa9.1□□□□□ -0.95
MRPL48-211ENST00000543058 RGL2O15211 777 aa9.09□□□□□ -0.95
MRPL48-211ENST00000543058 HOXB3P14651 431 aaPredicted RBP9.08□□□□□ -0.96
MRPL48-211ENST00000543058 NLRP6P59044 892 aa9.07□□□□□ -0.96
MRPL48-211ENST00000543058 CDAN1Q8IWY9 1227 aa9.06□□□□□ -0.96
MRPL48-211ENST00000543058 MFRPQ9BY79 579 aa9.06□□□□□ -0.96
MRPL48-211ENST00000543058 PLSCR2Q9NRY7 297 aa9.06□□□□□ -0.96
MRPL48-211ENST00000543058 STK25O00506 426 aa9.05□□□□□ -0.96
MRPL48-211ENST00000543058 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
MRPL48-211ENST00000543058 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
MRPL48-211ENST00000543058 MARVELD3Q96A59 401 aa9□□□□□ -0.97
MRPL48-211ENST00000543058 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
MRPL48-211ENST00000543058 DOK7Q18PE1 504 aa8.99□□□□□ -0.97
MRPL48-211ENST00000543058 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
MRPL48-211ENST00000543058 EMP3P54852 163 aa8.97□□□□□ -0.97
MRPL48-211ENST00000543058 HS6ST3Q8IZP7 471 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms