RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
XRCC4-206ENST00000542685 GALR2O43603 387 aaPredicted RBP15.31■□□□□ 0.04
XRCC4-206ENST00000542685 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
XRCC4-206ENST00000542685 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
XRCC4-206ENST00000542685 DCBLD2Q96PD2 775 aa15.23■□□□□ 0.03
XRCC4-206ENST00000542685 DCAF8Q5TAQ9 597 aa15.22■□□□□ 0.03
XRCC4-206ENST00000542685 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
XRCC4-206ENST00000542685 MS4A3Q96HJ5 214 aa15.21■□□□□ 0.03
XRCC4-206ENST00000542685 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
XRCC4-206ENST00000542685 MAP3K13O43283 966 aa15.16■□□□□ 0.02
XRCC4-206ENST00000542685 SPOCK2Q92563 424 aa15.15■□□□□ 0.02
XRCC4-206ENST00000542685 PYGBP11216 843 aa15.08■□□□□ 0
XRCC4-206ENST00000542685 GSE1Q14687 1217 aa15.08■□□□□ 0
XRCC4-206ENST00000542685 PCDHB13Q9Y5F0 798 aa15.08■□□□□ 0
XRCC4-206ENST00000542685 CIZ1Q9ULV3 898 aaPredicted RBP15.03■□□□□ -0
XRCC4-206ENST00000542685 TRPC6Q9Y210 931 aa15.02■□□□□ -0
XRCC4-206ENST00000542685 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
XRCC4-206ENST00000542685 IFNL1Q8IU54 200 aa15□□□□□ -0.01
XRCC4-206ENST00000542685 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
XRCC4-206ENST00000542685 ASTLQ6HA08 431 aaPredicted RBP14.97□□□□□ -0.01
XRCC4-206ENST00000542685 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
XRCC4-206ENST00000542685 BMP2KQ9NSY1 1161 aaPredicted RBP14.95□□□□□ -0.02
XRCC4-206ENST00000542685 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
XRCC4-206ENST00000542685 TIE1P35590 1138 aa14.92□□□□□ -0.02
XRCC4-206ENST00000542685 PCDHB8Q9UN66 801 aa14.91□□□□□ -0.02
XRCC4-206ENST00000542685 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
XRCC4-206ENST00000542685 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
XRCC4-206ENST00000542685 LHX8Q68G74 356 aa14.88□□□□□ -0.03
XRCC4-206ENST00000542685 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
XRCC4-206ENST00000542685 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
XRCC4-206ENST00000542685 SLC39A7Q92504 469 aa14.83□□□□□ -0.04
XRCC4-206ENST00000542685 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
XRCC4-206ENST00000542685 C7P10643 843 aa14.8□□□□□ -0.04
XRCC4-206ENST00000542685 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
XRCC4-206ENST00000542685 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
XRCC4-206ENST00000542685 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
XRCC4-206ENST00000542685 PSEN1P49768 467 aa14.71□□□□□ -0.05
XRCC4-206ENST00000542685 SEC24BO95487 1268 aa14.68□□□□□ -0.06
XRCC4-206ENST00000542685 PDAP1Q13442 181 aaKnown RBP14.67□□□□□ -0.06
XRCC4-206ENST00000542685 IER5LQ5T953 404 aa14.66□□□□□ -0.06
XRCC4-206ENST00000542685 POTEFA5A3E0 1075 aa14.65□□□□□ -0.06
XRCC4-206ENST00000542685 COLQQ9Y215 455 aaPredicted RBP14.65□□□□□ -0.06
XRCC4-206ENST00000542685 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
XRCC4-206ENST00000542685 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
XRCC4-206ENST00000542685 ECM2O94769 699 aaPredicted RBP14.6□□□□□ -0.07
XRCC4-206ENST00000542685 RIOK3O14730 519 aaKnown RBP14.59□□□□□ -0.07
XRCC4-206ENST00000542685 PKD2Q13563 968 aa14.58□□□□□ -0.08
XRCC4-206ENST00000542685 POTEJP0CG39 1038 aa14.57□□□□□ -0.08
XRCC4-206ENST00000542685 PLCG2P16885 1265 aa14.56□□□□□ -0.08
XRCC4-206ENST00000542685 MKRN3Q13064 507 aaKnown RBP14.56□□□□□ -0.08
XRCC4-206ENST00000542685 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
XRCC4-206ENST00000542685 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
XRCC4-206ENST00000542685 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
XRCC4-206ENST00000542685 OCEL1Q9H607 264 aa14.52□□□□□ -0.09
XRCC4-206ENST00000542685 VGFO15240 615 aaPredicted RBP14.51□□□□□ -0.09
XRCC4-206ENST00000542685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.49□□□□□ -0.09
XRCC4-206ENST00000542685 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
XRCC4-206ENST00000542685 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
XRCC4-206ENST00000542685 RGL2O15211 777 aa14.46□□□□□ -0.09
XRCC4-206ENST00000542685 SCUBE2Q9NQ36 999 aa14.46□□□□□ -0.09
XRCC4-206ENST00000542685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.09
XRCC4-206ENST00000542685 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
XRCC4-206ENST00000542685 PDCD7Q8N8D1 485 aaKnown RBP14.42□□□□□ -0.1
XRCC4-206ENST00000542685 EFCAB3Q8N7B9 438 aa14.41□□□□□ -0.1
XRCC4-206ENST00000542685 BCL11BQ9C0K0 894 aaPredicted RBP14.37□□□□□ -0.11
XRCC4-206ENST00000542685 STK25O00506 426 aa14.35□□□□□ -0.11
XRCC4-206ENST00000542685 STK24Q9Y6E0 443 aa14.35□□□□□ -0.11
XRCC4-206ENST00000542685 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
XRCC4-206ENST00000542685 DPY19L2Q6NUT2 758 aa14.33□□□□□ -0.12
XRCC4-206ENST00000542685 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
XRCC4-206ENST00000542685 SOX12O15370 315 aa14.28□□□□□ -0.12
XRCC4-206ENST00000542685 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
XRCC4-206ENST00000542685 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
XRCC4-206ENST00000542685 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.24□□□□□ -0.13
XRCC4-206ENST00000542685 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
XRCC4-206ENST00000542685 G3V3G9 751 aa14.22□□□□□ -0.13
XRCC4-206ENST00000542685 BOLA1Q9Y3E2 137 aa14.21□□□□□ -0.13
XRCC4-206ENST00000542685 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
XRCC4-206ENST00000542685 NLRP6P59044 892 aa14.17□□□□□ -0.14
XRCC4-206ENST00000542685 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
XRCC4-206ENST00000542685 MFRPQ9BY79 579 aa14.15□□□□□ -0.14
XRCC4-206ENST00000542685 FAM163AQ96GL9 167 aaPredicted RBP14.14□□□□□ -0.15
XRCC4-206ENST00000542685 FBXO22Q8NEZ5 403 aa14.13□□□□□ -0.15
XRCC4-206ENST00000542685 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
XRCC4-206ENST00000542685 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
XRCC4-206ENST00000542685 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
XRCC4-206ENST00000542685 TMEM121BQ9BXQ6 578 aaPredicted RBP14.09□□□□□ -0.15
XRCC4-206ENST00000542685 LCE2DQ5TA82 110 aaPredicted RBP14.03□□□□□ -0.16
XRCC4-206ENST00000542685 SNPHO15079 494 aa14□□□□□ -0.17
XRCC4-206ENST00000542685 POTEMA6NI47 508 aa13.99□□□□□ -0.17
XRCC4-206ENST00000542685 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
XRCC4-206ENST00000542685 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
XRCC4-206ENST00000542685 ST18O60284 1047 aa13.96□□□□□ -0.17
XRCC4-206ENST00000542685 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
XRCC4-206ENST00000542685 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
XRCC4-206ENST00000542685 PPP1R37O75864 691 aa13.95□□□□□ -0.18
XRCC4-206ENST00000542685 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
XRCC4-206ENST00000542685 DNAJC5Q9H3Z4 198 aa13.92□□□□□ -0.18
XRCC4-206ENST00000542685 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
XRCC4-206ENST00000542685 RYDENQ9NUL5 291 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms