RNA–Protein interactions for RNA: ENST00000542443.5

TRDN-204, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-204ENST00000542443 VASPP50552 380 aaPredicted RBP14.49□□□□□ -0.09
TRDN-204ENST00000542443 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
TRDN-204ENST00000542443 NUBP1P53384 320 aa14.46□□□□□ -0.09
TRDN-204ENST00000542443 MS4A3Q96HJ5 214 aa14.44□□□□□ -0.1
TRDN-204ENST00000542443 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
TRDN-204ENST00000542443 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
TRDN-204ENST00000542443 FAM212AQ96EL1 285 aa14.38□□□□□ -0.11
TRDN-204ENST00000542443 MAP3K13O43283 966 aa14.35□□□□□ -0.11
TRDN-204ENST00000542443 DCAF8Q5TAQ9 597 aa14.33□□□□□ -0.12
TRDN-204ENST00000542443 LHX8Q68G74 356 aa14.29□□□□□ -0.12
TRDN-204ENST00000542443 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
TRDN-204ENST00000542443 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
TRDN-204ENST00000542443 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
TRDN-204ENST00000542443 ATMINO43313 823 aaPredicted RBP14.23□□□□□ -0.13
TRDN-204ENST00000542443 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
TRDN-204ENST00000542443 ASTLQ6HA08 431 aaPredicted RBP14.22□□□□□ -0.13
TRDN-204ENST00000542443 PYGBP11216 843 aa14.21□□□□□ -0.13
TRDN-204ENST00000542443 SGIP1Q9BQI5 828 aa14.19□□□□□ -0.14
TRDN-204ENST00000542443 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
TRDN-204ENST00000542443 BMP2KQ9NSY1 1161 aaPredicted RBP14.18□□□□□ -0.14
TRDN-204ENST00000542443 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
TRDN-204ENST00000542443 GSE1Q14687 1217 aa14.17□□□□□ -0.14
TRDN-204ENST00000542443 IFNL1Q8IU54 200 aa14.16□□□□□ -0.14
TRDN-204ENST00000542443 TIE1P35590 1138 aa14.14□□□□□ -0.15
TRDN-204ENST00000542443 SLC39A7Q92504 469 aa14.12□□□□□ -0.15
TRDN-204ENST00000542443 METRNQ9UJH8 293 aa14.12□□□□□ -0.15
TRDN-204ENST00000542443 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
TRDN-204ENST00000542443 C7P10643 843 aa14.1□□□□□ -0.15
TRDN-204ENST00000542443 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
TRDN-204ENST00000542443 PCDHB8Q9UN66 801 aa14.07□□□□□ -0.16
TRDN-204ENST00000542443 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
TRDN-204ENST00000542443 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
TRDN-204ENST00000542443 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.17
TRDN-204ENST00000542443 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
TRDN-204ENST00000542443 ZNF467Q7Z7K2 595 aaPredicted RBP13.97□□□□□ -0.17
TRDN-204ENST00000542443 SEC24BO95487 1268 aa13.95□□□□□ -0.18
TRDN-204ENST00000542443 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
TRDN-204ENST00000542443 POTEFA5A3E0 1075 aa13.92□□□□□ -0.18
TRDN-204ENST00000542443 IER5LQ5T953 404 aa13.91□□□□□ -0.18
TRDN-204ENST00000542443 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
TRDN-204ENST00000542443 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
TRDN-204ENST00000542443 PSEN1P49768 467 aa13.86□□□□□ -0.19
TRDN-204ENST00000542443 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
TRDN-204ENST00000542443 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
TRDN-204ENST00000542443 PLCG2P16885 1265 aa13.82□□□□□ -0.2
TRDN-204ENST00000542443 PDAP1Q13442 181 aaKnown RBP13.82□□□□□ -0.2
TRDN-204ENST00000542443 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
TRDN-204ENST00000542443 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
TRDN-204ENST00000542443 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
TRDN-204ENST00000542443 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
TRDN-204ENST00000542443 OCEL1Q9H607 264 aa13.75□□□□□ -0.21
TRDN-204ENST00000542443 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
TRDN-204ENST00000542443 RIOK3O14730 519 aaKnown RBP13.67□□□□□ -0.22
TRDN-204ENST00000542443 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
TRDN-204ENST00000542443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRDN-204ENST00000542443 PDCD7Q8N8D1 485 aaKnown RBP13.62□□□□□ -0.23
TRDN-204ENST00000542443 ECM2O94769 699 aaPredicted RBP13.61□□□□□ -0.23
TRDN-204ENST00000542443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
TRDN-204ENST00000542443 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
TRDN-204ENST00000542443 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
TRDN-204ENST00000542443 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
TRDN-204ENST00000542443 EFCAB3Q8N7B9 438 aa13.57□□□□□ -0.24
TRDN-204ENST00000542443 PKD2Q13563 968 aa13.56□□□□□ -0.24
TRDN-204ENST00000542443 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
TRDN-204ENST00000542443 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
TRDN-204ENST00000542443 L3MBTL3Q96JM7 780 aaPredicted RBP13.54□□□□□ -0.24
TRDN-204ENST00000542443 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
TRDN-204ENST00000542443 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
TRDN-204ENST00000542443 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
TRDN-204ENST00000542443 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
TRDN-204ENST00000542443 RGL2O15211 777 aa13.48□□□□□ -0.25
TRDN-204ENST00000542443 G3V3G9 751 aa13.47□□□□□ -0.25
TRDN-204ENST00000542443 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
TRDN-204ENST00000542443 POTEMA6NI47 508 aa13.45□□□□□ -0.26
TRDN-204ENST00000542443 STK24Q9Y6E0 443 aa13.45□□□□□ -0.26
TRDN-204ENST00000542443 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
TRDN-204ENST00000542443 STK25O00506 426 aa13.43□□□□□ -0.26
TRDN-204ENST00000542443 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
TRDN-204ENST00000542443 SOX12O15370 315 aa13.42□□□□□ -0.26
TRDN-204ENST00000542443 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
TRDN-204ENST00000542443 LCE2DQ5TA82 110 aaPredicted RBP13.41□□□□□ -0.26
TRDN-204ENST00000542443 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
TRDN-204ENST00000542443 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
TRDN-204ENST00000542443 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
TRDN-204ENST00000542443 SNPHO15079 494 aa13.32□□□□□ -0.28
TRDN-204ENST00000542443 ST18O60284 1047 aa13.32□□□□□ -0.28
TRDN-204ENST00000542443 NLRP6P59044 892 aa13.32□□□□□ -0.28
TRDN-204ENST00000542443 MICALL2Q8IY33 904 aa13.29□□□□□ -0.28
TRDN-204ENST00000542443 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
TRDN-204ENST00000542443 FBXO22Q8NEZ5 403 aa13.27□□□□□ -0.29
TRDN-204ENST00000542443 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
TRDN-204ENST00000542443 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
TRDN-204ENST00000542443 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
TRDN-204ENST00000542443 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
TRDN-204ENST00000542443 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
TRDN-204ENST00000542443 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
TRDN-204ENST00000542443 PCDH10Q9P2E7 1040 aa13.16□□□□□ -0.3
TRDN-204ENST00000542443 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
TRDN-204ENST00000542443 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
TRDN-204ENST00000542443 DOK7Q18PE1 504 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms