RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
MRPS35-204ENST00000542199 PIP4P2Q8N4L2 257 aa19.21■□□□□ 0.67
MRPS35-204ENST00000542199 RNF25Q96BH1 459 aaPredicted RBP19.19■□□□□ 0.66
MRPS35-204ENST00000542199 TSPYL2Q9H2G4 693 aaPredicted RBP19.09■□□□□ 0.65
MRPS35-204ENST00000542199 PYGBP11216 843 aa19.07■□□□□ 0.64
MRPS35-204ENST00000542199 PLCB2Q00722 1185 aa19.07■□□□□ 0.64
MRPS35-204ENST00000542199 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
MRPS35-204ENST00000542199 CHRM1P11229 460 aaPredicted RBP19.02■□□□□ 0.64
MRPS35-204ENST00000542199 RIOK3O14730 519 aaKnown RBP19.01■□□□□ 0.63
MRPS35-204ENST00000542199 BBXQ8WY36 941 aaPredicted RBP18.98■□□□□ 0.63
MRPS35-204ENST00000542199 HS6ST3Q8IZP7 471 aa18.91■□□□□ 0.62
MRPS35-204ENST00000542199 CCDC61Q9Y6R9 512 aa18.91■□□□□ 0.62
MRPS35-204ENST00000542199 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.88■□□□□ 0.61
MRPS35-204ENST00000542199 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
MRPS35-204ENST00000542199 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.6
MRPS35-204ENST00000542199 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
MRPS35-204ENST00000542199 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
MRPS35-204ENST00000542199 TAOK2Q9UL54 1235 aa18.81■□□□□ 0.6
MRPS35-204ENST00000542199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.8■□□□□ 0.6
MRPS35-204ENST00000542199 ZFP91Q96JP5 570 aaPredicted RBP18.8■□□□□ 0.6
MRPS35-204ENST00000542199 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
MRPS35-204ENST00000542199 STK25O00506 426 aa18.79■□□□□ 0.6
MRPS35-204ENST00000542199 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
MRPS35-204ENST00000542199 PCDHB8Q9UN66 801 aa18.77■□□□□ 0.6
MRPS35-204ENST00000542199 PCDHB13Q9Y5F0 798 aa18.77■□□□□ 0.6
MRPS35-204ENST00000542199 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
MRPS35-204ENST00000542199 ZNF467Q7Z7K2 595 aaPredicted RBP18.73■□□□□ 0.59
MRPS35-204ENST00000542199 SGIP1Q9BQI5 828 aa18.73■□□□□ 0.59
MRPS35-204ENST00000542199 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
MRPS35-204ENST00000542199 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
MRPS35-204ENST00000542199 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
MRPS35-204ENST00000542199 SPRYD3Q8NCJ5 442 aa18.7■□□□□ 0.58
MRPS35-204ENST00000542199 STK24Q9Y6E0 443 aa18.7■□□□□ 0.58
MRPS35-204ENST00000542199 MAP3K13O43283 966 aa18.69■□□□□ 0.58
MRPS35-204ENST00000542199 KIF12Q96FN5 646 aa18.69■□□□□ 0.58
MRPS35-204ENST00000542199 PHF12Q96QT6 1004 aa18.67■□□□□ 0.58
MRPS35-204ENST00000542199 IFNL1Q8IU54 200 aa18.65■□□□□ 0.58
MRPS35-204ENST00000542199 ZNF579Q8NAF0 562 aaKnown RBP18.65■□□□□ 0.58
MRPS35-204ENST00000542199 C19orf67A6NJJ6 358 aa18.63■□□□□ 0.57
MRPS35-204ENST00000542199 PDAP1Q13442 181 aaKnown RBP18.62■□□□□ 0.57
MRPS35-204ENST00000542199 PSEN1P49768 467 aa18.57■□□□□ 0.56
MRPS35-204ENST00000542199 GTPBP6O43824 516 aaPredicted RBP18.53■□□□□ 0.56
MRPS35-204ENST00000542199 TSHZ2Q9NRE2 1034 aa18.53■□□□□ 0.56
MRPS35-204ENST00000542199 MS4A3Q96HJ5 214 aa18.45■□□□□ 0.54
MRPS35-204ENST00000542199 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
MRPS35-204ENST00000542199 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
MRPS35-204ENST00000542199 HAX1O00165 279 aa18.42■□□□□ 0.54
MRPS35-204ENST00000542199 TRPC6Q9Y210 931 aa18.42■□□□□ 0.54
MRPS35-204ENST00000542199 EVX2Q03828 476 aa18.41■□□□□ 0.54
MRPS35-204ENST00000542199 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
MRPS35-204ENST00000542199 EFCAB3Q8N7B9 438 aa18.32■□□□□ 0.52
MRPS35-204ENST00000542199 MFRPQ9BY79 579 aa18.32■□□□□ 0.52
MRPS35-204ENST00000542199 RYDENQ9NUL5 291 aaKnown RBP18.3■□□□□ 0.52
MRPS35-204ENST00000542199 TMEM106CQ9BVX2 250 aa18.29■□□□□ 0.52
MRPS35-204ENST00000542199 GALR2O43603 387 aaPredicted RBP18.27■□□□□ 0.52
MRPS35-204ENST00000542199 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
MRPS35-204ENST00000542199 FBXO22Q8NEZ5 403 aa18.2■□□□□ 0.5
MRPS35-204ENST00000542199 TTLL13PA6NNM8 815 aa18.17■□□□□ 0.5
MRPS35-204ENST00000542199 TIE1P35590 1138 aa18.17■□□□□ 0.5
MRPS35-204ENST00000542199 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
MRPS35-204ENST00000542199 SOX12O15370 315 aa18.16■□□□□ 0.5
MRPS35-204ENST00000542199 POTEHQ6S545 545 aa18.16■□□□□ 0.5
MRPS35-204ENST00000542199 PPP1R37O75864 691 aa18.14■□□□□ 0.49
MRPS35-204ENST00000542199 NLRP6P59044 892 aa18.14■□□□□ 0.49
MRPS35-204ENST00000542199 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
MRPS35-204ENST00000542199 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
MRPS35-204ENST00000542199 CADPS2Q86UW7 1296 aa18.09■□□□□ 0.49
MRPS35-204ENST00000542199 MKRN3Q13064 507 aaKnown RBP18.06■□□□□ 0.48
MRPS35-204ENST00000542199 TRIM35Q9UPQ4 493 aa18.05■□□□□ 0.48
MRPS35-204ENST00000542199 CLCN6P51797 869 aa18.04■□□□□ 0.48
MRPS35-204ENST00000542199 GABBR2O75899 941 aa18■□□□□ 0.47
MRPS35-204ENST00000542199 ATN1P54259 1190 aaPredicted RBP18■□□□□ 0.47
MRPS35-204ENST00000542199 BCANQ96GW7 911 aa17.97■□□□□ 0.47
MRPS35-204ENST00000542199 ATMINO43313 823 aaPredicted RBP17.96■□□□□ 0.47
MRPS35-204ENST00000542199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.46
MRPS35-204ENST00000542199 ASTLQ6HA08 431 aaPredicted RBP17.92■□□□□ 0.46
MRPS35-204ENST00000542199 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
MRPS35-204ENST00000542199 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
MRPS35-204ENST00000542199 PDCD7Q8N8D1 485 aaKnown RBP17.82■□□□□ 0.44
MRPS35-204ENST00000542199 PELP1Q8IZL8 1130 aaKnown RBP17.81■□□□□ 0.44
MRPS35-204ENST00000542199 IRX5P78411 483 aaPredicted RBP17.8■□□□□ 0.44
MRPS35-204ENST00000542199 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
MRPS35-204ENST00000542199 DCBLD2Q96PD2 775 aa17.78■□□□□ 0.44
MRPS35-204ENST00000542199 WDR70Q9NW82 654 aa17.77■□□□□ 0.44
MRPS35-204ENST00000542199 IER5LQ5T953 404 aa17.75■□□□□ 0.43
MRPS35-204ENST00000542199 SP7Q8TDD2 431 aaPredicted RBP17.72■□□□□ 0.43
MRPS35-204ENST00000542199 KCNV2Q8TDN2 545 aa17.72■□□□□ 0.43
MRPS35-204ENST00000542199 OCEL1Q9H607 264 aa17.72■□□□□ 0.43
MRPS35-204ENST00000542199 NBR1Q14596 966 aa17.71■□□□□ 0.43
MRPS35-204ENST00000542199 CRISPLD2Q9H0B8 497 aa17.7■□□□□ 0.42
MRPS35-204ENST00000542199 POTEIP0CG38 1075 aa17.69■□□□□ 0.42
MRPS35-204ENST00000542199 MICALL2Q8IY33 904 aa17.68■□□□□ 0.42
MRPS35-204ENST00000542199 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
MRPS35-204ENST00000542199 PLCG2P16885 1265 aa17.67■□□□□ 0.42
MRPS35-204ENST00000542199 COLQQ9Y215 455 aaPredicted RBP17.66■□□□□ 0.42
MRPS35-204ENST00000542199 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
MRPS35-204ENST00000542199 PDE4AP27815 886 aa17.64■□□□□ 0.41
MRPS35-204ENST00000542199 MFSD10Q14728 455 aa17.62■□□□□ 0.41
MRPS35-204ENST00000542199 BOLA1Q9Y3E2 137 aa17.61■□□□□ 0.41
MRPS35-204ENST00000542199 POTEFA5A3E0 1075 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms