RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
SNHG1-219ENST00000542112 DCAF8Q5TAQ9 597 aa7.16□□□□□ -1.26
SNHG1-219ENST00000542112 PAXIP1Q6ZW49 1069 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-219ENST00000542112 TAOK2Q9UL54 1235 aa7.16□□□□□ -1.26
SNHG1-219ENST00000542112 CHGAP10645 457 aaKnown RBP7.15□□□□□ -1.26
SNHG1-219ENST00000542112 PITPNM1O00562 1244 aa7.14□□□□□ -1.27
SNHG1-219ENST00000542112 MNX1P50219 401 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-219ENST00000542112 SPRYD3Q8NCJ5 442 aa7.14□□□□□ -1.27
SNHG1-219ENST00000542112 HS6ST3Q8IZP7 471 aa7.13□□□□□ -1.27
SNHG1-219ENST00000542112 CFAP44Q96MT7 982 aa7.13□□□□□ -1.27
SNHG1-219ENST00000542112 RIOK3O14730 519 aaKnown RBP7.11□□□□□ -1.27
SNHG1-219ENST00000542112 CHRM1P11229 460 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-219ENST00000542112 RNF25Q96BH1 459 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-219ENST00000542112 DNAJC5Q9H3Z4 198 aa7.1□□□□□ -1.27
SNHG1-219ENST00000542112 RASEFQ8IZ41 740 aa7.08□□□□□ -1.28
SNHG1-219ENST00000542112 VGFO15240 615 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-219ENST00000542112 BCANQ96GW7 911 aa7.06□□□□□ -1.28
SNHG1-219ENST00000542112 SGIP1Q9BQI5 828 aa7.04□□□□□ -1.28
SNHG1-219ENST00000542112 STK25O00506 426 aa7.02□□□□□ -1.29
SNHG1-219ENST00000542112 HRCP23327 699 aa7.02□□□□□ -1.29
SNHG1-219ENST00000542112 KDM2AQ9Y2K7 1162 aa7.02□□□□□ -1.29
SNHG1-219ENST00000542112 PYGBP11216 843 aa7.01□□□□□ -1.29
SNHG1-219ENST00000542112 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
SNHG1-219ENST00000542112 FARP1Q9Y4F1 1045 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-219ENST00000542112 CHADLQ6NUI6 762 aa7□□□□□ -1.29
SNHG1-219ENST00000542112 RYDENQ9NUL5 291 aaKnown RBP7□□□□□ -1.29
SNHG1-219ENST00000542112 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-219ENST00000542112 NKX1-1Q15270 411 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-219ENST00000542112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 PRKAR2AP13861 404 aaKnown RBP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 FXR2P51116 673 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 ZNF467Q7Z7K2 595 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 ZFP91Q96JP5 570 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 BCL11BQ9C0K0 894 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 TSPYL2Q9H2G4 693 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-219ENST00000542112 STK24Q9Y6E0 443 aa6.97□□□□□ -1.29
SNHG1-219ENST00000542112 GTPBP6O43824 516 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-219ENST00000542112 PAK3O75914 559 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-219ENST00000542112 PDAP1Q13442 181 aaKnown RBP6.92□□□□□ -1.3
SNHG1-219ENST00000542112 DAXXQ9UER7 740 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-219ENST00000542112 CCDC61Q9Y6R9 512 aa6.92□□□□□ -1.3
SNHG1-219ENST00000542112 CHRDL2Q6WN34 429 aa6.91□□□□□ -1.3
SNHG1-219ENST00000542112 ZNF579Q8NAF0 562 aaKnown RBP6.9□□□□□ -1.3
SNHG1-219ENST00000542112 PIP4P2Q8N4L2 257 aa6.88□□□□□ -1.31
SNHG1-219ENST00000542112 PCDHB8Q9UN66 801 aa6.87□□□□□ -1.31
SNHG1-219ENST00000542112 PCDHB13Q9Y5F0 798 aa6.87□□□□□ -1.31
SNHG1-219ENST00000542112 PSEN1P49768 467 aa6.86□□□□□ -1.31
SNHG1-219ENST00000542112 NBR1Q14596 966 aa6.86□□□□□ -1.31
SNHG1-219ENST00000542112 KIF12Q96FN5 646 aa6.83□□□□□ -1.32
SNHG1-219ENST00000542112 IFNL1Q8IU54 200 aa6.82□□□□□ -1.32
SNHG1-219ENST00000542112 BCL11AQ9H165 835 aa6.82□□□□□ -1.32
SNHG1-219ENST00000542112 MAP3K13O43283 966 aa6.81□□□□□ -1.32
SNHG1-219ENST00000542112 CENPBP07199 599 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-219ENST00000542112 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
SNHG1-219ENST00000542112 ZRANB1Q9UGI0 708 aa6.8□□□□□ -1.32
SNHG1-219ENST00000542112 SOX12O15370 315 aa6.79□□□□□ -1.32
SNHG1-219ENST00000542112 TPRNQ4KMQ1 711 aa6.79□□□□□ -1.32
SNHG1-219ENST00000542112 MFRPQ9BY79 579 aa6.79□□□□□ -1.32
SNHG1-219ENST00000542112 NLRP6P59044 892 aa6.78□□□□□ -1.32
SNHG1-219ENST00000542112 P3H3Q8IVL6 736 aa6.78□□□□□ -1.32
SNHG1-219ENST00000542112 CABP2Q9NPB3 220 aa6.77□□□□□ -1.33
SNHG1-219ENST00000542112 WDR70Q9NW82 654 aa6.76□□□□□ -1.33
SNHG1-219ENST00000542112 EFCAB3Q8N7B9 438 aa6.75□□□□□ -1.33
SNHG1-219ENST00000542112 FBXO22Q8NEZ5 403 aa6.74□□□□□ -1.33
SNHG1-219ENST00000542112 PHF12Q96QT6 1004 aa6.74□□□□□ -1.33
SNHG1-219ENST00000542112 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
SNHG1-219ENST00000542112 C19orf67A6NJJ6 358 aa6.72□□□□□ -1.33
SNHG1-219ENST00000542112 GOLGA2Q08379 1002 aa6.72□□□□□ -1.33
SNHG1-219ENST00000542112 PHF8Q9UPP1 1060 aa6.72□□□□□ -1.33
SNHG1-219ENST00000542112 CCDC180Q9P1Z9 1646 aa6.69□□□□□ -1.34
SNHG1-219ENST00000542112 PPP1R37O75864 691 aa6.69□□□□□ -1.34
SNHG1-219ENST00000542112 ZEB1P37275 1124 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-219ENST00000542112 TMEM106CQ9BVX2 250 aa6.69□□□□□ -1.34
SNHG1-219ENST00000542112 MKRN3Q13064 507 aaKnown RBP6.68□□□□□ -1.34
SNHG1-219ENST00000542112 MS4A3Q96HJ5 214 aa6.68□□□□□ -1.34
SNHG1-219ENST00000542112 TIE1P35590 1138 aa6.67□□□□□ -1.34
SNHG1-219ENST00000542112 KCNV2Q8TDN2 545 aa6.67□□□□□ -1.34
SNHG1-219ENST00000542112 CLCN6P51797 869 aa6.66□□□□□ -1.34
SNHG1-219ENST00000542112 ARHGEF1Q92888 912 aaKnown RBP6.65□□□□□ -1.34
SNHG1-219ENST00000542112 MS4A4AQ96JQ5 239 aa6.65□□□□□ -1.34
SNHG1-219ENST00000542112 PDE4AP27815 886 aa6.64□□□□□ -1.35
SNHG1-219ENST00000542112 E2F4Q16254 413 aa6.64□□□□□ -1.35
SNHG1-219ENST00000542112 TULP1O00294 542 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-219ENST00000542112 FAM9AQ8IZU1 332 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-219ENST00000542112 TRPC6Q9Y210 931 aa6.63□□□□□ -1.35
SNHG1-219ENST00000542112 TTLL13PA6NNM8 815 aa6.62□□□□□ -1.35
SNHG1-219ENST00000542112 NCKAP5LQ9HCH0 1330 aa6.61□□□□□ -1.35
SNHG1-219ENST00000542112 ACIN1Q9UKV3 1341 aaKnown RBP6.61□□□□□ -1.35
SNHG1-219ENST00000542112 EIF5BO60841 1220 aaKnown RBP6.61□□□□□ -1.35
SNHG1-219ENST00000542112 MFSD10Q14728 455 aa6.6□□□□□ -1.35
SNHG1-219ENST00000542112 ILDR1Q86SU0 546 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-219ENST00000542112 LARP6Q9BRS8 491 aaKnown RBP6.6□□□□□ -1.35
SNHG1-219ENST00000542112 CRISPLD2Q9H0B8 497 aa6.6□□□□□ -1.35
SNHG1-219ENST00000542112 BMP2KQ9NSY1 1161 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-219ENST00000542112 ANP32EQ9BTT0 268 aa6.59□□□□□ -1.35
SNHG1-219ENST00000542112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNHG1-219ENST00000542112 HAX1O00165 279 aa6.58□□□□□ -1.36
SNHG1-219ENST00000542112 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNHG1-219ENST00000542112 DDX27Q96GQ7 796 aaKnown RBP6.58□□□□□ -1.36
SNHG1-219ENST00000542112 TRIM35Q9UPQ4 493 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms