RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	NUBP1	P53384	320 aa		5.52	□□□□□ -1.53
CARS2-223	ENST00000540785	RNF25	Q96BH1	459 aa	Predicted RBP	5.52	□□□□□ -1.53
CARS2-223	ENST00000540785	STK25	O00506	426 aa		5.51	□□□□□ -1.53
CARS2-223	ENST00000540785	GTPBP6	O43824	516 aa	Predicted RBP	5.5	□□□□□ -1.53
CARS2-223	ENST00000540785	NKX1-1	Q15270	411 aa	Predicted RBP	5.5	□□□□□ -1.53
CARS2-223	ENST00000540785	FAM212A	Q96EL1	285 aa		5.5	□□□□□ -1.53
CARS2-223	ENST00000540785	VGF	O15240	615 aa	Predicted RBP	5.49	□□□□□ -1.53
CARS2-223	ENST00000540785	POTED	Q86YR6	584 aa		5.49	□□□□□ -1.53
CARS2-223	ENST00000540785	CLEC11A	Q9Y240	323 aa		5.49	□□□□□ -1.53
CARS2-223	ENST00000540785	SPDYE1	Q8NFV5	336 aa	Predicted RBP	5.48	□□□□□ -1.53
CARS2-223	ENST00000540785	PRR29	P0C7W0	189 aa		5.47	□□□□□ -1.53
CARS2-223	ENST00000540785	STK24	Q9Y6E0	443 aa		5.47	□□□□□ -1.53
CARS2-223	ENST00000540785	CACNB1	Q02641	598 aa	Predicted RBP	5.45	□□□□□ -1.54
CARS2-223	ENST00000540785	BCL11B	Q9C0K0	894 aa	Predicted RBP	5.45	□□□□□ -1.54
CARS2-223	ENST00000540785	RYDEN	Q9NUL5	291 aa	Known RBP	5.45	□□□□□ -1.54
CARS2-223	ENST00000540785	CHRM1	P11229	460 aa	Predicted RBP	5.44	□□□□□ -1.54
CARS2-223	ENST00000540785	CREBZF	Q9NS37	354 aa		5.44	□□□□□ -1.54
CARS2-223	ENST00000540785	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	5.43	□□□□□ -1.54
CARS2-223	ENST00000540785	ZFP91	Q96JP5	570 aa	Predicted RBP	5.43	□□□□□ -1.54
CARS2-223	ENST00000540785	GTF3C3	Q9Y5Q9	886 aa		5.43	□□□□□ -1.54
CARS2-223	ENST00000540785	TULP1	O00294	542 aa	Predicted RBP	5.42	□□□□□ -1.54
CARS2-223	ENST00000540785	PYGB	P11216	843 aa		5.42	□□□□□ -1.54
CARS2-223	ENST00000540785	AKT1S1	Q96B36	256 aa		5.42	□□□□□ -1.54
CARS2-223	ENST00000540785	SGIP1	Q9BQI5	828 aa		5.42	□□□□□ -1.54
CARS2-223	ENST00000540785	RASEF	Q8IZ41	740 aa		5.41	□□□□□ -1.54
CARS2-223	ENST00000540785	WDR70	Q9NW82	654 aa		5.41	□□□□□ -1.54
CARS2-223	ENST00000540785	RBM42	Q9BTD8	480 aa	Known RBP	5.4	□□□□□ -1.54
CARS2-223	ENST00000540785	MNX1	P50219	401 aa	Predicted RBP	5.39	□□□□□ -1.55
CARS2-223	ENST00000540785	P3H3	Q8IVL6	736 aa		5.39	□□□□□ -1.55
CARS2-223	ENST00000540785	TIMELESS	Q9UNS1	1208 aa		5.39	□□□□□ -1.55
CARS2-223	ENST00000540785	ERICH6	Q7L0X2	663 aa		5.38	□□□□□ -1.55
CARS2-223	ENST00000540785	REM2	Q8IYK8	340 aa	Predicted RBP	5.37	□□□□□ -1.55
CARS2-223	ENST00000540785	TMEM132A	Q24JP5	1023 aa		5.36	□□□□□ -1.55
CARS2-223	ENST00000540785	ZNF467	Q7Z7K2	595 aa	Predicted RBP	5.34	□□□□□ -1.55
CARS2-223	ENST00000540785	TSPYL2	Q9H2G4	693 aa	Predicted RBP	5.34	□□□□□ -1.55
CARS2-223	ENST00000540785	LMOD2	Q6P5Q4	547 aa		5.33	□□□□□ -1.56
CARS2-223	ENST00000540785	PDAP1	Q13442	181 aa	Known RBP	5.32	□□□□□ -1.56
CARS2-223	ENST00000540785	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	5.32	□□□□□ -1.56
CARS2-223	ENST00000540785	CADPS2	Q86UW7	1296 aa		5.32	□□□□□ -1.56
CARS2-223	ENST00000540785	KCNV2	Q8TDN2	545 aa		5.32	□□□□□ -1.56
CARS2-223	ENST00000540785	C14orf37	Q86TY3	774 aa		5.3	□□□□□ -1.56
CARS2-223	ENST00000540785	PCDHB8	Q9UN66	801 aa		5.3	□□□□□ -1.56
CARS2-223	ENST00000540785	PCDHB13	Q9Y5F0	798 aa		5.3	□□□□□ -1.56
CARS2-223	ENST00000540785	PITPNM1	O00562	1244 aa		5.29	□□□□□ -1.56
CARS2-223	ENST00000540785	PSEN1	P49768	467 aa		5.28	□□□□□ -1.56
CARS2-223	ENST00000540785	CHADL	Q6NUI6	762 aa		5.28	□□□□□ -1.56
CARS2-223	ENST00000540785	MFRP	Q9BY79	579 aa		5.26	□□□□□ -1.57
CARS2-223	ENST00000540785	E2F4	Q16254	413 aa		5.25	□□□□□ -1.57
CARS2-223	ENST00000540785	ZNF579	Q8NAF0	562 aa	Known RBP	5.25	□□□□□ -1.57
CARS2-223	ENST00000540785	ARHGEF1	Q92888	912 aa	Known RBP	5.25	□□□□□ -1.57
CARS2-223	ENST00000540785	ARX	Q96QS3	562 aa		5.25	□□□□□ -1.57
CARS2-223	ENST00000540785	FARP1	Q9Y4F1	1045 aa	Predicted RBP	5.25	□□□□□ -1.57
CARS2-223	ENST00000540785	NLRP6	P59044	892 aa		5.24	□□□□□ -1.57
CARS2-223	ENST00000540785	NEUROD2	Q15784	382 aa		5.24	□□□□□ -1.57
CARS2-223	ENST00000540785	ZC3H15	Q8WU90	426 aa	Known RBP	5.24	□□□□□ -1.57
CARS2-223	ENST00000540785	PPP1R37	O75864	691 aa		5.23	□□□□□ -1.57
CARS2-223	ENST00000540785	BRPF1	P55201	1214 aa	Predicted RBP	5.23	□□□□□ -1.57
CARS2-223	ENST00000540785	SEMA3E	O15041	775 aa		5.22	□□□□□ -1.57
CARS2-223	ENST00000540785	PAK3	O75914	559 aa	Predicted RBP	5.22	□□□□□ -1.57
CARS2-223	ENST00000540785	EFCAB3	Q8N7B9	438 aa		5.22	□□□□□ -1.57
CARS2-223	ENST00000540785	SLC24A3	Q9HC58	644 aa		5.22	□□□□□ -1.57
CARS2-223	ENST00000540785	CABP2	Q9NPB3	220 aa		5.22	□□□□□ -1.57
CARS2-223	ENST00000540785	SOX12	O15370	315 aa		5.21	□□□□□ -1.58
CARS2-223	ENST00000540785	SMYD5	Q6GMV2	418 aa		5.21	□□□□□ -1.58
CARS2-223	ENST00000540785	PHF8	Q9UPP1	1060 aa		5.21	□□□□□ -1.58
CARS2-223	ENST00000540785	CCDC61	Q9Y6R9	512 aa		5.21	□□□□□ -1.58
CARS2-223	ENST00000540785	TESPA1	A2RU30	521 aa	Predicted RBP	5.2	□□□□□ -1.58
CARS2-223	ENST00000540785	PDE4A	P27815	886 aa		5.2	□□□□□ -1.58
CARS2-223	ENST00000540785	LARP6	Q9BRS8	491 aa	Known RBP	5.2	□□□□□ -1.58
CARS2-223	ENST00000540785	PRKAR2A	P13861	404 aa	Known RBP	5.19	□□□□□ -1.58
CARS2-223	ENST00000540785	IFNL1	Q8IU54	200 aa		5.19	□□□□□ -1.58
CARS2-223	ENST00000540785	FBXO22	Q8NEZ5	403 aa		5.19	□□□□□ -1.58
CARS2-223	ENST00000540785	MAP3K13	O43283	966 aa		5.18	□□□□□ -1.58
CARS2-223	ENST00000540785	HOMEZ	Q8IX15	550 aa		5.18	□□□□□ -1.58
CARS2-223	ENST00000540785	SUPT5H	O00267	1087 aa	Known RBP	5.15	□□□□□ -1.59
CARS2-223	ENST00000540785	ZMYND10	O75800	440 aa		5.15	□□□□□ -1.59
CARS2-223	ENST00000540785	GOLGA2	Q08379	1002 aa		5.15	□□□□□ -1.59
CARS2-223	ENST00000540785	KIF12	Q96FN5	646 aa		5.15	□□□□□ -1.59
CARS2-223	ENST00000540785	KRI1	Q8N9T8	703 aa	Known RBP	5.14	□□□□□ -1.59
CARS2-223	ENST00000540785	DDX27	Q96GQ7	796 aa	Known RBP	5.14	□□□□□ -1.59
CARS2-223	ENST00000540785	NCKAP5L	Q9HCH0	1330 aa		5.14	□□□□□ -1.59
CARS2-223	ENST00000540785	MFSD10	Q14728	455 aa		5.12	□□□□□ -1.59
CARS2-223	ENST00000540785	BARGIN	Q6ZT62	677 aa		5.12	□□□□□ -1.59
CARS2-223	ENST00000540785	DAXX	Q9UER7	740 aa	Predicted RBP	5.12	□□□□□ -1.59
CARS2-223	ENST00000540785	FXR2	P51116	673 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
CARS2-223	ENST00000540785	MS4A4A	Q96JQ5	239 aa		5.11	□□□□□ -1.59
CARS2-223	ENST00000540785	AK7	Q96M32	723 aa		5.11	□□□□□ -1.59
CARS2-223	ENST00000540785	CRISPLD2	Q9H0B8	497 aa		5.11	□□□□□ -1.59
CARS2-223	ENST00000540785	ZRANB1	Q9UGI0	708 aa		5.11	□□□□□ -1.59
CARS2-223	ENST00000540785	MKRN3	Q13064	507 aa	Known RBP	5.1	□□□□□ -1.59
CARS2-223	ENST00000540785	RBM26	Q5T8P6	1007 aa	Known RBP	5.1	□□□□□ -1.59
CARS2-223	ENST00000540785	GPIHBP1	Q8IV16	184 aa		5.1	□□□□□ -1.59
CARS2-223	ENST00000540785	IL27	Q8NEV9	243 aa		5.09	□□□□□ -1.59
CARS2-223	ENST00000540785	TMEM106C	Q9BVX2	250 aa		5.09	□□□□□ -1.59
CARS2-223	ENST00000540785	ARIH1	Q9Y4X5	557 aa	Predicted RBP	5.09	□□□□□ -1.59
CARS2-223	ENST00000540785	MLLT3	P42568	568 aa	Predicted RBP	5.08	□□□□□ -1.6
CARS2-223	ENST00000540785	CAMK2B	Q13554	666 aa		5.08	□□□□□ -1.6
CARS2-223	ENST00000540785	GPBP1L1	Q9HC44	474 aa	Predicted RBP	5.08	□□□□□ -1.6
CARS2-223	ENST00000540785	PPP1R15B	Q5SWA1	713 aa		5.07	□□□□□ -1.6
CARS2-223	ENST00000540785	PHF12	Q96QT6	1004 aa		5.07	□□□□□ -1.6

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