RNA–Protein interactions for RNA: ENST00000539972.5

MDM1-209, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-209ENST00000539972 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
MDM1-209ENST00000539972 NUBP1P53384 320 aa12.5□□□□□ -0.41
MDM1-209ENST00000539972 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
MDM1-209ENST00000539972 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
MDM1-209ENST00000539972 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
MDM1-209ENST00000539972 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
MDM1-209ENST00000539972 MAP3K13O43283 966 aa12.35□□□□□ -0.43
MDM1-209ENST00000539972 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
MDM1-209ENST00000539972 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
MDM1-209ENST00000539972 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
MDM1-209ENST00000539972 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
MDM1-209ENST00000539972 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
MDM1-209ENST00000539972 LHX8Q68G74 356 aa12.29□□□□□ -0.44
MDM1-209ENST00000539972 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
MDM1-209ENST00000539972 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
MDM1-209ENST00000539972 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
MDM1-209ENST00000539972 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
MDM1-209ENST00000539972 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
MDM1-209ENST00000539972 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
MDM1-209ENST00000539972 TIE1P35590 1138 aa12.23□□□□□ -0.45
MDM1-209ENST00000539972 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
MDM1-209ENST00000539972 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
MDM1-209ENST00000539972 GSE1Q14687 1217 aa12.21□□□□□ -0.45
MDM1-209ENST00000539972 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
MDM1-209ENST00000539972 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
MDM1-209ENST00000539972 PYGBP11216 843 aa12.19□□□□□ -0.46
MDM1-209ENST00000539972 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
MDM1-209ENST00000539972 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
MDM1-209ENST00000539972 C7P10643 843 aa12.16□□□□□ -0.46
MDM1-209ENST00000539972 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
MDM1-209ENST00000539972 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
MDM1-209ENST00000539972 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
MDM1-209ENST00000539972 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
MDM1-209ENST00000539972 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
MDM1-209ENST00000539972 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
MDM1-209ENST00000539972 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
MDM1-209ENST00000539972 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
MDM1-209ENST00000539972 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
MDM1-209ENST00000539972 IER5LQ5T953 404 aa12.03□□□□□ -0.48
MDM1-209ENST00000539972 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
MDM1-209ENST00000539972 POTEJP0CG39 1038 aa12□□□□□ -0.49
MDM1-209ENST00000539972 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
MDM1-209ENST00000539972 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
MDM1-209ENST00000539972 SEC24BO95487 1268 aa11.95□□□□□ -0.5
MDM1-209ENST00000539972 PKD2Q13563 968 aa11.94□□□□□ -0.5
MDM1-209ENST00000539972 PSEN1P49768 467 aa11.93□□□□□ -0.5
MDM1-209ENST00000539972 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
MDM1-209ENST00000539972 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
MDM1-209ENST00000539972 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
MDM1-209ENST00000539972 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
MDM1-209ENST00000539972 PLCG2P16885 1265 aa11.87□□□□□ -0.51
MDM1-209ENST00000539972 OCEL1Q9H607 264 aa11.85□□□□□ -0.51
MDM1-209ENST00000539972 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
MDM1-209ENST00000539972 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
MDM1-209ENST00000539972 GOLGA2Q08379 1002 aa11.81□□□□□ -0.52
MDM1-209ENST00000539972 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
MDM1-209ENST00000539972 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
MDM1-209ENST00000539972 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
MDM1-209ENST00000539972 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
MDM1-209ENST00000539972 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
MDM1-209ENST00000539972 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
MDM1-209ENST00000539972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.53
MDM1-209ENST00000539972 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
MDM1-209ENST00000539972 RGL2O15211 777 aa11.72□□□□□ -0.53
MDM1-209ENST00000539972 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
MDM1-209ENST00000539972 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
MDM1-209ENST00000539972 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
MDM1-209ENST00000539972 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
MDM1-209ENST00000539972 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
MDM1-209ENST00000539972 DPY19L2Q6NUT2 758 aa11.64□□□□□ -0.55
MDM1-209ENST00000539972 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
MDM1-209ENST00000539972 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
MDM1-209ENST00000539972 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
MDM1-209ENST00000539972 SOX12O15370 315 aa11.59□□□□□ -0.55
MDM1-209ENST00000539972 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
MDM1-209ENST00000539972 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
MDM1-209ENST00000539972 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
MDM1-209ENST00000539972 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
MDM1-209ENST00000539972 POTEMA6NI47 508 aa11.55□□□□□ -0.56
MDM1-209ENST00000539972 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
MDM1-209ENST00000539972 STK25O00506 426 aa11.53□□□□□ -0.56
MDM1-209ENST00000539972 CHGAP10645 457 aaKnown RBP11.53□□□□□ -0.56
MDM1-209ENST00000539972 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
MDM1-209ENST00000539972 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
MDM1-209ENST00000539972 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
MDM1-209ENST00000539972 PHF8Q9UPP1 1060 aa11.53□□□□□ -0.56
MDM1-209ENST00000539972 G3V3G9 751 aa11.5□□□□□ -0.57
MDM1-209ENST00000539972 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
MDM1-209ENST00000539972 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
MDM1-209ENST00000539972 NLRP6P59044 892 aa11.48□□□□□ -0.57
MDM1-209ENST00000539972 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
MDM1-209ENST00000539972 SNPHO15079 494 aa11.47□□□□□ -0.57
MDM1-209ENST00000539972 ST18O60284 1047 aa11.47□□□□□ -0.57
MDM1-209ENST00000539972 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
MDM1-209ENST00000539972 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
MDM1-209ENST00000539972 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
MDM1-209ENST00000539972 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
MDM1-209ENST00000539972 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
MDM1-209ENST00000539972 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
MDM1-209ENST00000539972 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms