RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
LINC00346-201ENST00000538077 MTUS2Q5JR59 1369 aa15.03■□□□□ -0
LINC00346-201ENST00000538077 ACIN1Q9UKV3 1341 aaKnown RBP15.02■□□□□ -0
LINC00346-201ENST00000538077 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
LINC00346-201ENST00000538077 ANP32BQ92688 251 aaKnown RBP15.01□□□□□ -0.01
LINC00346-201ENST00000538077 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
LINC00346-201ENST00000538077 NBR1Q14596 966 aa14.98□□□□□ -0.01
LINC00346-201ENST00000538077 MRS2Q9HD23 443 aa14.97□□□□□ -0.01
LINC00346-201ENST00000538077 TULP1O00294 542 aaPredicted RBP14.96□□□□□ -0.01
LINC00346-201ENST00000538077 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
LINC00346-201ENST00000538077 CCDC136Q96JN2 1154 aa14.95□□□□□ -0.02
LINC00346-201ENST00000538077 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
LINC00346-201ENST00000538077 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.94□□□□□ -0.02
LINC00346-201ENST00000538077 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
LINC00346-201ENST00000538077 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
LINC00346-201ENST00000538077 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
LINC00346-201ENST00000538077 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
LINC00346-201ENST00000538077 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
LINC00346-201ENST00000538077 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
LINC00346-201ENST00000538077 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
LINC00346-201ENST00000538077 TNNT2P45379 298 aaPredicted RBP14.85□□□□□ -0.03
LINC00346-201ENST00000538077 MLECQ14165 292 aa14.84□□□□□ -0.03
LINC00346-201ENST00000538077 NPHP1O15259 732 aa14.84□□□□□ -0.03
LINC00346-201ENST00000538077 NEUROD2Q15784 382 aa14.83□□□□□ -0.03
LINC00346-201ENST00000538077 CLIP1P30622 1438 aa14.82□□□□□ -0.04
LINC00346-201ENST00000538077 CDK11BP21127 795 aaKnown RBP14.81□□□□□ -0.04
LINC00346-201ENST00000538077 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00346-201ENST00000538077 SOX12O15370 315 aa14.79□□□□□ -0.04
LINC00346-201ENST00000538077 MIER1Q8N108 512 aa14.78□□□□□ -0.04
LINC00346-201ENST00000538077 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
LINC00346-201ENST00000538077 POGKQ9P215 609 aa14.77□□□□□ -0.04
LINC00346-201ENST00000538077 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
LINC00346-201ENST00000538077 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
LINC00346-201ENST00000538077 KNSTRNQ9Y448 316 aa14.74□□□□□ -0.05
LINC00346-201ENST00000538077 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
LINC00346-201ENST00000538077 CFAP53Q96M91 514 aa14.73□□□□□ -0.05
LINC00346-201ENST00000538077 NCLP19338 710 aaKnown RBP14.73□□□□□ -0.05
LINC00346-201ENST00000538077 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
LINC00346-201ENST00000538077 SAFB2Q14151 953 aaKnown RBP eCLIP14.71□□□□□ -0.05
LINC00346-201ENST00000538077 FTSJ3Q8IY81 847 aaKnown RBP14.7□□□□□ -0.06
LINC00346-201ENST00000538077 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
LINC00346-201ENST00000538077 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
LINC00346-201ENST00000538077 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
LINC00346-201ENST00000538077 DCAF1Q9Y4B6 1507 aa14.67□□□□□ -0.06
LINC00346-201ENST00000538077 FRAT1Q92837 279 aaPredicted RBP14.66□□□□□ -0.06
LINC00346-201ENST00000538077 GOLGA3Q08378 1498 aa14.66□□□□□ -0.06
LINC00346-201ENST00000538077 CEP162Q5TB80 1403 aa14.65□□□□□ -0.06
LINC00346-201ENST00000538077 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
LINC00346-201ENST00000538077 SIN3AQ96ST3 1273 aa14.64□□□□□ -0.07
LINC00346-201ENST00000538077 NAP1L2Q9ULW6 460 aaPredicted RBP14.63□□□□□ -0.07
LINC00346-201ENST00000538077 CASC1Q6TDU7 716 aa14.62□□□□□ -0.07
LINC00346-201ENST00000538077 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
LINC00346-201ENST00000538077 STK26Q9P289 416 aa14.61□□□□□ -0.07
LINC00346-201ENST00000538077 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
LINC00346-201ENST00000538077 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
LINC00346-201ENST00000538077 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
LINC00346-201ENST00000538077 BECN1Q14457 450 aa14.59□□□□□ -0.07
LINC00346-201ENST00000538077 SRPK2P78362 688 aaKnown RBP14.58□□□□□ -0.07
LINC00346-201ENST00000538077 CDCA8Q53HL2 280 aa14.58□□□□□ -0.07
LINC00346-201ENST00000538077 GLIPR1L2Q4G1C9 344 aa14.58□□□□□ -0.08
LINC00346-201ENST00000538077 SUPT16HQ9Y5B9 1047 aaKnown RBP14.57□□□□□ -0.08
LINC00346-201ENST00000538077 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
LINC00346-201ENST00000538077 RGS3P49796 1198 aa14.57□□□□□ -0.08
LINC00346-201ENST00000538077 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
LINC00346-201ENST00000538077 DCAF11Q8TEB1 546 aa14.57□□□□□ -0.08
LINC00346-201ENST00000538077 NUDCQ9Y266 331 aa14.56□□□□□ -0.08
LINC00346-201ENST00000538077 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
LINC00346-201ENST00000538077 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
LINC00346-201ENST00000538077 WIZO95785 1651 aa14.56□□□□□ -0.08
LINC00346-201ENST00000538077 GGT6Q6P531 493 aa14.56□□□□□ -0.08
LINC00346-201ENST00000538077 CCNB3Q8WWL7 1395 aa14.55□□□□□ -0.08
LINC00346-201ENST00000538077 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
LINC00346-201ENST00000538077 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
LINC00346-201ENST00000538077 CLSTN1O94985 981 aa14.53□□□□□ -0.08
LINC00346-201ENST00000538077 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
LINC00346-201ENST00000538077 PTMAP06454 111 aaKnown RBP14.52□□□□□ -0.08
LINC00346-201ENST00000538077 PLCB2Q00722 1185 aa14.52□□□□□ -0.09
LINC00346-201ENST00000538077 FGD1P98174 961 aa14.52□□□□□ -0.09
LINC00346-201ENST00000538077 KANK1Q14678 1352 aa14.52□□□□□ -0.09
LINC00346-201ENST00000538077 FOXD1Q16676 465 aa14.51□□□□□ -0.09
LINC00346-201ENST00000538077 GOLGA6L22H0YM25 854 aa14.51□□□□□ -0.09
LINC00346-201ENST00000538077 TRIM44Q96DX7 344 aaPredicted RBP14.51□□□□□ -0.09
LINC00346-201ENST00000538077 KCNJ4P48050 445 aa14.5□□□□□ -0.09
LINC00346-201ENST00000538077 NUTM2DQ5VT03 806 aaPredicted RBP14.5□□□□□ -0.09
LINC00346-201ENST00000538077 CCDC9Q9Y3X0 531 aaKnown RBP14.5□□□□□ -0.09
LINC00346-201ENST00000538077 APBB1O00213 710 aa14.48□□□□□ -0.09
LINC00346-201ENST00000538077 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
LINC00346-201ENST00000538077 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
LINC00346-201ENST00000538077 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
LINC00346-201ENST00000538077 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
LINC00346-201ENST00000538077 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
LINC00346-201ENST00000538077 TMF1P82094 1093 aa14.45□□□□□ -0.1
LINC00346-201ENST00000538077 DNTTIP2Q5QJE6 756 aaKnown RBP14.45□□□□□ -0.1
LINC00346-201ENST00000538077 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
LINC00346-201ENST00000538077 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
LINC00346-201ENST00000538077 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
LINC00346-201ENST00000538077 CUX2O14529 1486 aa14.44□□□□□ -0.1
LINC00346-201ENST00000538077 RTF1Q92541 710 aaKnown RBP14.42□□□□□ -0.1
LINC00346-201ENST00000538077 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
LINC00346-201ENST00000538077 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms