RNA–Protein interactions for RNA: ENST00000535811.1

PARPBP-208, Transcript of PARP1 binding protein, human

TSL 2

Gene PARPBP, Length 1,465 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PARPBP-208	ENST00000535811	CLCN6	P51797	869 aa		13.24	□□□□□ -0.29
PARPBP-208	ENST00000535811	KLHL34	Q8N239	644 aa		13.24	□□□□□ -0.29
PARPBP-208	ENST00000535811	CCDC61	Q9Y6R9	512 aa		13.21	□□□□□ -0.3
PARPBP-208	ENST00000535811	SPOCK2	Q92563	424 aa		13.2	□□□□□ -0.3
PARPBP-208	ENST00000535811	FAM212A	Q96EL1	285 aa		13.18	□□□□□ -0.3
PARPBP-208	ENST00000535811	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.17	□□□□□ -0.3
PARPBP-208	ENST00000535811	PHF12	Q96QT6	1004 aa		13.12	□□□□□ -0.31
PARPBP-208	ENST00000535811	GSE1	Q14687	1217 aa		13.1	□□□□□ -0.31
PARPBP-208	ENST00000535811	DCBLD2	Q96PD2	775 aa		13.1	□□□□□ -0.31
PARPBP-208	ENST00000535811	GALR2	O43603	387 aa	Predicted RBP	13.09	□□□□□ -0.31
PARPBP-208	ENST00000535811	KIF12	Q96FN5	646 aa		13.07	□□□□□ -0.32
PARPBP-208	ENST00000535811	DCAF8	Q5TAQ9	597 aa		13.05	□□□□□ -0.32
PARPBP-208	ENST00000535811	SGIP1	Q9BQI5	828 aa		13.04	□□□□□ -0.32
PARPBP-208	ENST00000535811	POTEM	A6NI47	508 aa		13.03	□□□□□ -0.32
PARPBP-208	ENST00000535811	CHRM1	P11229	460 aa	Predicted RBP	13.01	□□□□□ -0.33
PARPBP-208	ENST00000535811	MS4A3	Q96HJ5	214 aa		12.99	□□□□□ -0.33
PARPBP-208	ENST00000535811	MAP3K13	O43283	966 aa		12.98	□□□□□ -0.33
PARPBP-208	ENST00000535811	PCDH10	Q9P2E7	1040 aa		12.98	□□□□□ -0.33
PARPBP-208	ENST00000535811	TRIM41	Q8WV44	630 aa		12.97	□□□□□ -0.33
PARPBP-208	ENST00000535811	POTEG	Q6S5H5	508 aa		12.95	□□□□□ -0.34
PARPBP-208	ENST00000535811	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.94	□□□□□ -0.34
PARPBP-208	ENST00000535811	PYGB	P11216	843 aa		12.93	□□□□□ -0.34
PARPBP-208	ENST00000535811	PCDHB13	Q9Y5F0	798 aa		12.91	□□□□□ -0.34
PARPBP-208	ENST00000535811	IFNL1	Q8IU54	200 aa		12.88	□□□□□ -0.35
PARPBP-208	ENST00000535811	PELP1	Q8IZL8	1130 aa	Known RBP	12.86	□□□□□ -0.35
PARPBP-208	ENST00000535811	TIE1	P35590	1138 aa		12.85	□□□□□ -0.35
PARPBP-208	ENST00000535811	ASTL	Q6HA08	431 aa	Predicted RBP	12.85	□□□□□ -0.35
PARPBP-208	ENST00000535811	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.85	□□□□□ -0.35
PARPBP-208	ENST00000535811	OTUD5	Q96G74	571 aa		12.84	□□□□□ -0.35
PARPBP-208	ENST00000535811	PKD2	Q13563	968 aa		12.83	□□□□□ -0.36
PARPBP-208	ENST00000535811	POTEB2	H3BUK9	544 aa		12.82	□□□□□ -0.36
PARPBP-208	ENST00000535811	TRPC6	Q9Y210	931 aa		12.82	□□□□□ -0.36
PARPBP-208	ENST00000535811	ATMIN	O43313	823 aa	Predicted RBP	12.8	□□□□□ -0.36
PARPBP-208	ENST00000535811	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.79	□□□□□ -0.36
PARPBP-208	ENST00000535811	PCDHB8	Q9UN66	801 aa		12.78	□□□□□ -0.36
PARPBP-208	ENST00000535811	RNF25	Q96BH1	459 aa	Predicted RBP	12.76	□□□□□ -0.37
PARPBP-208	ENST00000535811	TTLL13P	A6NNM8	815 aa		12.75	□□□□□ -0.37
PARPBP-208	ENST00000535811	ATN1	P54259	1190 aa	Predicted RBP	12.72	□□□□□ -0.37
PARPBP-208	ENST00000535811	METRN	Q9UJH8	293 aa		12.72	□□□□□ -0.37
PARPBP-208	ENST00000535811	ECM2	O94769	699 aa	Predicted RBP	12.72	□□□□□ -0.37
PARPBP-208	ENST00000535811	RIOK3	O14730	519 aa	Known RBP	12.71	□□□□□ -0.38
PARPBP-208	ENST00000535811	PDAP1	Q13442	181 aa	Known RBP	12.71	□□□□□ -0.38
PARPBP-208	ENST00000535811	SLC39A7	Q92504	469 aa		12.69	□□□□□ -0.38
PARPBP-208	ENST00000535811	TMEM106C	Q9BVX2	250 aa		12.69	□□□□□ -0.38
PARPBP-208	ENST00000535811	PSEN1	P49768	467 aa		12.67	□□□□□ -0.38
PARPBP-208	ENST00000535811	C7	P10643	843 aa		12.66	□□□□□ -0.38
PARPBP-208	ENST00000535811	VGF	O15240	615 aa	Predicted RBP	12.65	□□□□□ -0.38
PARPBP-208	ENST00000535811	IER5L	Q5T953	404 aa		12.65	□□□□□ -0.38
PARPBP-208	ENST00000535811	TRIM35	Q9UPQ4	493 aa		12.65	□□□□□ -0.38
PARPBP-208	ENST00000535811	POTEJ	P0CG39	1038 aa		12.64	□□□□□ -0.39
PARPBP-208	ENST00000535811	RGL2	O15211	777 aa		12.62	□□□□□ -0.39
PARPBP-208	ENST00000535811	TAOK2	Q9UL54	1235 aa		12.62	□□□□□ -0.39
PARPBP-208	ENST00000535811	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.59	□□□□□ -0.39
PARPBP-208	ENST00000535811	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.56	□□□□□ -0.4
PARPBP-208	ENST00000535811	POTEF	A5A3E0	1075 aa		12.56	□□□□□ -0.4
PARPBP-208	ENST00000535811	ZFP91	Q96JP5	570 aa	Predicted RBP	12.56	□□□□□ -0.4
PARPBP-208	ENST00000535811	IRX5	P78411	483 aa	Predicted RBP	12.52	□□□□□ -0.41
PARPBP-208	ENST00000535811	ILDR1	Q86SU0	546 aa	Predicted RBP	12.52	□□□□□ -0.41
PARPBP-208	ENST00000535811	MAMSTR	Q6ZN01	415 aa		12.49	□□□□□ -0.41
PARPBP-208	ENST00000535811	GOLGA2	Q08379	1002 aa		12.48	□□□□□ -0.41
PARPBP-208	ENST00000535811	CABP2	Q9NPB3	220 aa		12.48	□□□□□ -0.41
PARPBP-208	ENST00000535811	COLQ	Q9Y215	455 aa	Predicted RBP	12.48	□□□□□ -0.41
PARPBP-208	ENST00000535811	RTN4	Q9NQC3	1192 aa	Known RBP	12.47	□□□□□ -0.41
PARPBP-208	ENST00000535811	MKRN3	Q13064	507 aa	Known RBP	12.46	□□□□□ -0.41
PARPBP-208	ENST00000535811	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.45	□□□□□ -0.42
PARPBP-208	ENST00000535811	OCEL1	Q9H607	264 aa		12.45	□□□□□ -0.42
PARPBP-208	ENST00000535811	SEC24B	O95487	1268 aa		12.44	□□□□□ -0.42
PARPBP-208	ENST00000535811	STK25	O00506	426 aa		12.43	□□□□□ -0.42
PARPBP-208	ENST00000535811	HS6ST3	Q8IZP7	471 aa		12.43	□□□□□ -0.42
PARPBP-208	ENST00000535811	SCUBE2	Q9NQ36	999 aa		12.43	□□□□□ -0.42
PARPBP-208	ENST00000535811	PLCG2	P16885	1265 aa		12.42	□□□□□ -0.42
PARPBP-208	ENST00000535811	PDCD7	Q8N8D1	485 aa	Known RBP	12.42	□□□□□ -0.42
PARPBP-208	ENST00000535811	LCE2D	Q5TA82	110 aa	Predicted RBP	12.41	□□□□□ -0.42
PARPBP-208	ENST00000535811	EFCAB3	Q8N7B9	438 aa		12.41	□□□□□ -0.42
PARPBP-208	ENST00000535811	DNAJC5	Q9H3Z4	198 aa		12.4	□□□□□ -0.42
PARPBP-208	ENST00000535811	SOX12	O15370	315 aa		12.4	□□□□□ -0.43
PARPBP-208	ENST00000535811	STK24	Q9Y6E0	443 aa		12.4	□□□□□ -0.43
PARPBP-208	ENST00000535811	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.38	□□□□□ -0.43	7e-7	■■□□□ 12.6
PARPBP-208	ENST00000535811	FAM163A	Q96GL9	167 aa	Predicted RBP	12.33	□□□□□ -0.44
PARPBP-208	ENST00000535811	CHGA	P10645	457 aa	Known RBP	12.31	□□□□□ -0.44
PARPBP-208	ENST00000535811	FBXO22	Q8NEZ5	403 aa		12.31	□□□□□ -0.44
PARPBP-208	ENST00000535811	MFRP	Q9BY79	579 aa		12.31	□□□□□ -0.44
PARPBP-208	ENST00000535811	NLRP6	P59044	892 aa		12.29	□□□□□ -0.44
PARPBP-208	ENST00000535811	MS4A4A	Q96JQ5	239 aa		12.29	□□□□□ -0.44
PARPBP-208	ENST00000535811	PHF8	Q9UPP1	1060 aa		12.28	□□□□□ -0.44
PARPBP-208	ENST00000535811	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.27	□□□□□ -0.44
PARPBP-208	ENST00000535811	DPY19L2	Q6NUT2	758 aa		12.24	□□□□□ -0.45
PARPBP-208	ENST00000535811	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.24	□□□□□ -0.45
PARPBP-208	ENST00000535811	NKX1-1	Q15270	411 aa	Predicted RBP	12.21	□□□□□ -0.45
PARPBP-208	ENST00000535811	CDAN1	Q8IWY9	1227 aa		12.21	□□□□□ -0.45
PARPBP-208	ENST00000535811	BOLA1	Q9Y3E2	137 aa		12.21	□□□□□ -0.46
PARPBP-208	ENST00000535811	DCAF8L2	P0C7V8	631 aa		12.2	□□□□□ -0.46
PARPBP-208	ENST00000535811	SLAIN1	Q8ND83	568 aa		12.18	□□□□□ -0.46
PARPBP-208	ENST00000535811	RYDEN	Q9NUL5	291 aa	Known RBP	12.16	□□□□□ -0.46
PARPBP-208	ENST00000535811	MICALL2	Q8IY33	904 aa		12.15	□□□□□ -0.46
PARPBP-208	ENST00000535811	C3orf67	Q6ZVT6	689 aa		12.14	□□□□□ -0.47
PARPBP-208	ENST00000535811	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.14	□□□□□ -0.47
PARPBP-208	ENST00000535811		G3V3G9	751 aa		12.12	□□□□□ -0.47
PARPBP-208	ENST00000535811	BBX	Q8WY36	941 aa	Predicted RBP	12.11	□□□□□ -0.47
PARPBP-208	ENST00000535811	GTPBP6	O43824	516 aa	Predicted RBP	12.09	□□□□□ -0.47

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